prot_Ecto-sp13_S_contig16941.4953.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16941.4953.1
Unique Nameprot_Ecto-sp13_S_contig16941.4953.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length404
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16941.4953.1 vs. uniprot
Match: D7G5G7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5G7_ECTSI)

HSP 1 Score: 477 bits (1227), Expect = 6.040e-158
Identity = 297/381 (77.95%), Postives = 307/381 (80.58%), Query Frame = 0 
Query:    1 MSALQNMNGLNGVGENQGREKQXXXXXXXXXXXXXXGHLLLPASQKAIRDLAYALEKDSDDWHSEREKWAKERAALEASLGYKESHMQVLKKENKRLARVVGDAKRENERHARESSRLRDEKADLLARNARLDARNLEVRKQIEALAERNRKLKVTVEREVLGDINLSSAASGNTNNSKRPAAVDRSPQEAASSSVQLEGGIQSIVVPNHRRRPAETIAPGRGSNASTHRXXXXXXXXSDTDEVVTPRSTAPGEDHAPPPAVTAASMRNHSEPVGQGTKGWRLATEAAKAAHTIRQGSEMVEAAPRGGGKGGQTGXGGGETRVSGRVESSRLEEKCNGASARDDEALPGYDSRHRAPPHGPQDGQGLPSGEGRGIRSDRSR 381
            MSALQN+NGLNGVGENQGR++Q   XXXXXXXXXXXGHLLL ASQKAIRDLAYALEKDSD WHSEREKWAKERAALEASLGYKESHMQVLKKENKRLARVVGDAK                                  RKQIEALAERNRKLK TVERE+L DIN +SAASGN+NNSKRPAAVDR PQEAASSSVQLEGGIQSIVVPN RRRPAETIAP RGSNASTHRXXXXXXXX    EVVTPRSTAPGEDH PPPAVTAAS RNH+E VGQG KGWRLATEAAKA HTIRQGS MVEAAPR GGKGG T X       SGRVESS LEE+C GA+ARDDE LPG+DSRHRA PHGP  GQGLPSGE R IR DRSR
Sbjct:    1 MSALQNINGLNGVGENQGRDQQQPQXXXXXXXXXXXGHLLLSASQKAIRDLAYALEKDSDGWHSEREKWAKERAALEASLGYKESHMQVLKKENKRLARVVGDAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKQIEALAERNRKLKATVERELLDDINPNSAASGNSNNSKRPAAVDRRPQEAASSSVQLEGGIQSIVVPNPRRRPAETIAPSRGSNASTHRXXXXXXXXXXXXEVVTPRSTAPGEDHEPPPAVTAASTRNHAEAVGQGVKGWRLATEAAKATHTIRQGSGMVEAAPRAGGKGGHTXXXXXXXXXSGRVESSPLEEECKGATARDDEVLPGFDSRHRASPHGPHHGQGLPSGERRRIRRDRSR 381
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16941.4953.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G5G7_ECTSI6.040e-15877.95Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 87..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16941contigEcto-sp13_S_contig16941:1765..3797 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16941.4953.1mRNA_Ecto-sp13_S_contig16941.4953.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16941 1765..3797 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16941.4953.1 ID=prot_Ecto-sp13_S_contig16941.4953.1|Name=mRNA_Ecto-sp13_S_contig16941.4953.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=404bp
MSALQNMNGLNGVGENQGREKQQQHEQGGGGGGGEGGHLLLPASQKAIRD
LAYALEKDSDDWHSEREKWAKERAALEASLGYKESHMQVLKKENKRLARV
VGDAKRENERHARESSRLRDEKADLLARNARLDARNLEVRKQIEALAERN
RKLKVTVEREVLGDINLSSAASGNTNNSKRPAAVDRSPQEAASSSVQLEG
GIQSIVVPNHRRRPAETIAPGRGSNASTHRRRRRRSENSDTDEVVTPRST
APGEDHAPPPAVTAASMRNHSEPVGQGTKGWRLATEAAKAAHTIRQGSEM
VEAAPRGGGKGGQTGGGGGETRVSGRVESSRLEEKCNGASARDDEALPGY
DSRHRAPPHGPQDGQGLPSGEGRGIRSDRSRSSDSCGNGRHGRNGRHNSA
TLSP
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