prot_Ecto-sp13_S_contig16940.4952.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16940.4952.1
Unique Nameprot_Ecto-sp13_S_contig16940.4952.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length163
Homology
BLAST of mRNA_Ecto-sp13_S_contig16940.4952.1 vs. uniprot
Match: D8LQ80_ECTSI (Histone H1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ80_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 8.440e-43
Identity = 75/80 (93.75%), Postives = 78/80 (97.50%), Query Frame = 0
Query:    1 MSTAKPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFVKMKASYKLSAEAKKPAPK 80
            M++ KPTYN MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKF+KMKASYKLSAEAKKPAPK
Sbjct:    1 MASTKPTYNAMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKKPAPK 80          
BLAST of mRNA_Ecto-sp13_S_contig16940.4952.1 vs. uniprot
Match: A0A6H5KCU1_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCU1_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 3.220e-40
Identity = 74/77 (96.10%), Postives = 75/77 (97.40%), Query Frame = 0
Query:    3 TAKPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFVKMKASYKLSAEAKKPAP 79
            TAKPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMR ALKKGVESGKF+KMKASYKLS EAKKPAP
Sbjct:   96 TAKPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRGALKKGVESGKFIKMKASYKLSPEAKKPAP 172          
BLAST of mRNA_Ecto-sp13_S_contig16940.4952.1 vs. uniprot
Match: A0A6H5KST0_9PHAE (H15 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KST0_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 4.050e-37
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0
Query:   11 MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFVKMKASYKLSAEAKKPAPK 80
            MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFVKMKASYKLSAEAKKPAPK
Sbjct:    1 MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFVKMKASYKLSAEAKKPAPK 70          
BLAST of mRNA_Ecto-sp13_S_contig16940.4952.1 vs. uniprot
Match: D7G4I5_ECTSI (H15 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4I5_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 1.370e-33
Identity = 62/77 (80.52%), Postives = 70/77 (90.91%), Query Frame = 0
Query:    2 STAKPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFVKMKASYKLSAEAKKPA 78
            +TAKPTY+VMVFDAIK LKER GSS+ A+KK I ATYP+LNFTPHQMRSALKKG ESGKF+K+K+SYKLS EAKKPA
Sbjct:    3 TTAKPTYSVMVFDAIKALKERGGSSLPALKKQIMATYPSLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPA 79          
BLAST of mRNA_Ecto-sp13_S_contig16940.4952.1 vs. uniprot
Match: D8LQ75_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ75_ECTSI)

HSP 1 Score: 124 bits (312), Expect = 3.070e-33
Identity = 63/70 (90.00%), Postives = 68/70 (97.14%), Query Frame = 0
Query:   11 MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFVKMKASYKLSAEAKKPAPK 80
            MVFDAIK+LKERNGSSIQAIKKSITATYP LNFTPHQMRSALKKGVE+GKF+K+K+SYKLSAEAKKP PK
Sbjct:    1 MVFDAIKSLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVETGKFIKVKSSYKLSAEAKKPVPK 70          
BLAST of mRNA_Ecto-sp13_S_contig16940.4952.1 vs. uniprot
Match: A0A6H5JHR9_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHR9_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 4.120e-28
Identity = 55/68 (80.88%), Postives = 61/68 (89.71%), Query Frame = 0
Query:   11 MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFVKMKASYKLSAEAKKPA 78
            MVFDAIK LKER GSS+ A+KK I ATYP+LNFTPHQMRSALKKG ESGKF+K+K+SYKLS EAKKPA
Sbjct:    1 MVFDAIKALKERGGSSLPALKKQIMATYPSLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPA 68          
BLAST of mRNA_Ecto-sp13_S_contig16940.4952.1 vs. uniprot
Match: A0A6H5K9S6_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9S6_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 2.340e-24
Identity = 49/61 (80.33%), Postives = 57/61 (93.44%), Query Frame = 0
Query:   11 MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFVKMKASYKLS 71
            MVFDAIKTLKERNGSSIQA+KKSITATYP L+FTPHQMRSALKKGVE+GKF+K++ +  L+
Sbjct:    1 MVFDAIKTLKERNGSSIQAMKKSITATYPALHFTPHQMRSALKKGVETGKFIKVRHALPLA 61          
BLAST of mRNA_Ecto-sp13_S_contig16940.4952.1 vs. uniprot
Match: D8LMF1_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF1_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 5.880e-24
Identity = 51/72 (70.83%), Postives = 58/72 (80.56%), Query Frame = 0
Query:    6 PTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFVKMKASYKLSAEAKKP 77
            PTY+ M   AI  LKERNGSS+ AIKK I ATYPTLNF PHQ+R ALKKG E+G F+K+KASYK+S EAKKP
Sbjct:    2 PTYSEMAKVAILALKERNGSSVPAIKKHIQATYPTLNFLPHQLRGALKKGTETGTFIKVKASYKVSPEAKKP 73          
BLAST of mRNA_Ecto-sp13_S_contig16940.4952.1 vs. uniprot
Match: D8LJB8_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJB8_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 8.240e-23
Identity = 52/75 (69.33%), Postives = 62/75 (82.67%), Query Frame = 0
Query:    6 PTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFVKMKASYKLSAEAKKPAPK 80
            PTY+ M  +A+K LKERNGSS+ AIKK ITA+YP+L FT H MRSALKKGVESGKF+K+K SYKLSA  ++PA K
Sbjct:    2 PTYDEMTIEAVKALKERNGSSLFAIKKHITASYPSLTFTAHFMRSALKKGVESGKFIKVKNSYKLSAYRQEPAAK 76          
BLAST of mRNA_Ecto-sp13_S_contig16940.4952.1 vs. uniprot
Match: A0A6H5JIM8_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM8_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 8.660e-21
Identity = 48/67 (71.64%), Postives = 57/67 (85.07%), Query Frame = 0
Query:    6 PTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFVKMKASYKLSA 72
            PTY+ M  +A+K LKERNGSS+ AIKK ITA+YP+L FT H +RSALKKGVESGKF+K+K SYKLSA
Sbjct:    2 PTYDEMTVEAVKALKERNGSSLFAIKKHITASYPSLTFTGHFLRSALKKGVESGKFIKVKNSYKLSA 68          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16940.4952.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ80_ECTSI8.440e-4393.75Histone H1 n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5KCU1_9PHAE3.220e-4096.10H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KST0_9PHAE4.050e-37100.00H15 domain-containing protein n=6 Tax=Ectocarpus T... [more]
D7G4I5_ECTSI1.370e-3380.52H15 domain-containing protein n=2 Tax=Ectocarpus T... [more]
D8LQ75_ECTSI3.070e-3390.00H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JHR9_9PHAE4.120e-2880.88H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K9S6_9PHAE2.340e-2480.33H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LMF1_ECTSI5.880e-2470.83H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LJB8_ECTSI8.240e-2369.33H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JIM8_9PHAE8.660e-2171.64H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005819Histone H5PRINTSPR00624HISTONEH5coord: 18..35
score: 48.77
coord: 143..162
score: 40.56
coord: 93..107
score: 35.56
IPR005818Linker histone H1/H5, domain H15SMARTSM00526h15plus2coord: 2..67
e-value: 1.9E-23
score: 93.9
IPR005818Linker histone H1/H5, domain H15PFAMPF00538Linker_histonecoord: 5..70
e-value: 4.2E-20
score: 71.9
IPR005818Linker histone H1/H5, domain H15PROSITEPS51504H15coord: 4..72
score: 28.631
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..87
e-value: 1.4E-19
score: 72.0
NoneNo IPR availablePANTHERPTHR11467HISTONE H1coord: 3..157
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 4..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16940contigEcto-sp13_S_contig16940:143..1425 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16940.4952.1mRNA_Ecto-sp13_S_contig16940.4952.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16940 71..2704 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16940.4952.1 ID=prot_Ecto-sp13_S_contig16940.4952.1|Name=mRNA_Ecto-sp13_S_contig16940.4952.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=163bp
MSTAKPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRS
ALKKGVESGKFVKMKASYKLSAEAKKPAPKKKVVKKKVVKKVVKKKVPKK
KVVKKPAVKKTTTKKPAAKKATTTKKTVTKKKPTTAKKPAAKKTTTKKKP
STPKKKAAPKKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005819Histone_H5
IPR005818Histone_H1/H5_H15
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf