prot_Ecto-sp13_S_contig16912.4941.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16912.4941.1
Unique Nameprot_Ecto-sp13_S_contig16912.4941.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length230
Homology
BLAST of mRNA_Ecto-sp13_S_contig16912.4941.1 vs. uniprot
Match: D7G727_ECTSI (Coatomer subunit delta n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G727_ECTSI)

HSP 1 Score: 446 bits (1148), Expect = 1.790e-153
Identity = 228/230 (99.13%), Postives = 228/230 (99.13%), Query Frame = 0
Query:    1 MKLGGASKSKNMLDSLIKEDHLVSIPSASKASAGGTEAAVPAAVVAASVHPVSLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDPSGAFTFQTHPKVNKGMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESHMPLTINCWPEPEGGGQMNVSMEYELVRPMELHDVRISIPLGSSAVPEIAAIDGSHRHLTQEGTLLWTMDLLDQSNRTG 230
            MKLGGASKSKNMLDSLIKEDHLVSIPSASKASAGGTEAAVPAAVVAASVHPVSLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDPSG FTFQTHPKVNKGMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDES MPLTINCWPEPEGGGQMNVSMEYELVRPMELHDVRISIPLGSSAVPEIAAIDGSHRHLTQEGTLLWTMDLLDQSNRTG
Sbjct:  269 MKLGGASKSKNMLDSLIKEDHLVSIPSASKASAGGTEAAVPAAVVAASVHPVSLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDPSGTFTFQTHPKVNKGMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESQMPLTINCWPEPEGGGQMNVSMEYELVRPMELHDVRISIPLGSSAVPEIAAIDGSHRHLTQEGTLLWTMDLLDQSNRTG 498          
BLAST of mRNA_Ecto-sp13_S_contig16912.4941.1 vs. uniprot
Match: A0A835ZBZ4_9STRA (Coatomer subunit delta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBZ4_9STRA)

HSP 1 Score: 243 bits (621), Expect = 2.470e-74
Identity = 132/235 (56.17%), Postives = 170/235 (72.34%), Query Frame = 0
Query:    4 GGASKSKN-MLDSLIKEDHLVSIPSASKASAGGTEAAVP---AAVVAASVHPVSLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDPSGA-FTFQTHPKVNKGMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESHMPLTINCWPEPEGGGQMNVSMEYELVR-PMELHDVRISIPLGSSAVPE--IAAIDGSHRHLTQEGTLLWTMDLLDQSNRTG 230
            GG +K +N MLDSL+ E+ L  +P+A   +AGG  A +P   AA  AA+V+PVSL +EE+LS  LTREGTLE +EVKGTLSLTAN +GA++CK+VLA+  P  A   FQTHPKVN+ +YD+++ LA KD  KGFPV RPVGVLRWSL T+DE+  PLT+NCWPE EG G + VS+EY L R   ELHDV IS+PLG +A P    +A  G++RH    G L+W ++L+D SN +G
Sbjct:  249 GGTAKGRNAMLDSLMAEEKLAPVPAA---AAGGAPAVLPEVTAAATAAAVYPVSLVMEEKLSAHLTREGTLEQLEVKGTLSLTANDEGASRCKIVLAAGGPVPAGLAFQTHPKVNRALYDASRALALKDAGKGFPVGRPVGVLRWSLATSDEAAAPLTVNCWPEDEGNGSVAVSLEYALGRGARELHDVVISVPLGGAAAPPRVTSADGGAYRHDAAAGALVWRLELIDNSNASG 480          
BLAST of mRNA_Ecto-sp13_S_contig16912.4941.1 vs. uniprot
Match: A0A4D9DAV0_9STRA (Coatomer subunit delta n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAV0_9STRA)

HSP 1 Score: 221 bits (562), Expect = 1.650e-65
Identity = 120/239 (50.21%), Postives = 168/239 (70.29%), Query Frame = 0
Query:    1 MKLGGASKSKNMLDSLIKEDHLVSIPSAS----KASAGGTEAAVPAAVVAASVHPVSLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTD----PSGAFTFQTHPKVNKGMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESHMPLTINCWPEPEGGGQMNVSMEYELV-RPMELHDVRISIPLGSSAVPEIAAIDGSHRHLTQEGTLLWTMDLLDQSNRTG 230
            MKLG  SK+ +MLDSL++ED+L +I +       A AG  E AV A V+     P+ L+VEE++   LTR+G +++ EVKG+L+LTA ++ A   KV LA+      P+G   FQTHPKVNK  YDS + L  KD +KGFPV R VGVLRWS ++TD+S +P+T+NCWPE EG G+MN+S+EY++  +  ELH+V +SIPLG++  PE+A+IDG++RH  +E  L+W MDL+D SN +G
Sbjct:  251 MKLGAPSKAASMLDSLVQEDNLSNIAATRAPPLSAGAGLGEEAVSAPVI--QHQPIQLAVEEKIVAHLTRDGAIDTFEVKGSLTLTATTEAAALSKVALAAGGARPVPAG-LNFQTHPKVNKQEYDSNRVLVLKDTSKGFPVGRAVGVLRWSYSSTDDSVVPITLNCWPEEEGQGKMNISIEYQMNGQSQELHNVNVSIPLGTAEPPEVASIDGTYRHDPREQRLIWHMDLVDASNSSG 486          
BLAST of mRNA_Ecto-sp13_S_contig16912.4941.1 vs. uniprot
Match: F0YG49_AURAN (Coatomer subunit delta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YG49_AURAN)

HSP 1 Score: 214 bits (544), Expect = 3.820e-63
Identity = 114/230 (49.57%), Postives = 151/230 (65.65%), Query Frame = 0
Query:    1 MKLGGASKSKNMLDSLIKEDHLVSIPSASKASAGGTEAAVPAAVVAASVHPVSLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDPSGAFTFQTHPKVNKGMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESHMPLTINCWPEPEGGGQMNVSMEYELVRPMELHDVRISIPLGSSAVPEIAAIDGSHRHLTQEGTLLWTMDLLDQSNRTG 230
            MKLGG     +++D +  ED  +SI  A   S   +           +  P+SL VEE+L+  L++EG LES ++KGTLSLTAN +GA  CKV +A    +   TFQ HPKV+K  +++   +  KD +KGFPV RPVGV+RWSL+TTDE+ +PLTINCWPE EG G MNV++EYEL RPMEL+DV I IP G    PEI ++DGSH H  +E  L W +D++D SN+ G
Sbjct:  228 MKLGGKKNKSSLMDKMAAEDG-ISIAPAFTPSKPASXXXXXXXXXXXAAQPISLIVEEKLTVALSQEGALESFDLKGTLSLTANDEGAALCKVQIADKAAAPGTTFQVHPKVSKKDWEADGAVMMKDASKGFPVGRPVGVVRWSLSTTDEALVPLTINCWPEDEGDGVMNVNVEYELKRPMELYDVVIRIP-GCGNAPEIVSVDGSHTHDAKEEVLDWKLDMVDGSNKQG 455          
BLAST of mRNA_Ecto-sp13_S_contig16912.4941.1 vs. uniprot
Match: A0A7S2HPZ3_9STRA (Coatomer subunit delta n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HPZ3_9STRA)

HSP 1 Score: 206 bits (525), Expect = 3.500e-62
Identity = 109/231 (47.19%), Postives = 157/231 (67.97%), Query Frame = 0
Query:    1 MKLGGASKSKNMLDSLIKEDHLVSIPSASKASAGGTEAAVPAAVVA-ASVHPVSLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDPSGAFTFQTHPKVNKGMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESHMPLTINCWPEPEGGGQMNVSMEYELVRPMELHDVRISIPLGSSAVPEIAAID-GSHRHLTQEGTLLWTMDLLDQSNRT 229
            MKLGG+SK + ++D  + ED+L   P ++K +    +A  PA   A  + HPVSL +EE+++  + REG LE ME+KGT++L AN D  +KCKV+LA    +  FT+QTHPKV+K  Y+    L  KD+ KGFP  + +G+LRWS+NT D+S +P++INCWPE E G  MNV++E+     MELH+V+ISIPLG+S  PEI ++D GSH+H      L+W ++L+D  N+T
Sbjct:   56 MKLGGSSKKQQIMDKFVSEDNLA--PLSAKGNDTSGKAMTPATAAAPVATHPVSLLLEEKVAVTMNREGALELMEIKGTMALVANGDEFSKCKVILAGAK-NPLFTYQTHPKVDKKAYEKENILCLKDKNKGFPKGK-LGILRWSMNTQDDSQVPISINCWPEDEDGN-MNVNVEFNAEGDMELHNVQISIPLGTSNPPEIVSMDTGSHKHNRTNEVLIWDIELIDGQNKT 281          
BLAST of mRNA_Ecto-sp13_S_contig16912.4941.1 vs. uniprot
Match: A0A024GKI5_9STRA (Coatomer subunit delta n=3 Tax=Albugo candida TaxID=65357 RepID=A0A024GKI5_9STRA)

HSP 1 Score: 210 bits (534), Expect = 2.500e-61
Identity = 117/233 (50.21%), Postives = 156/233 (66.95%), Query Frame = 0
Query:    1 MKLGGA-SKS-KNMLDSLIKEDHLVSIPSASKASAGGTEAAVPAAVVAASVHPVSLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDPSGAFTFQTHPKVNKGMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESHMPLTINCWPEPEGGGQMNVSMEYELVRP-MELHDVRISIPLGSSAVPEIAAIDGSHRHLTQEGTLLWTMDLLDQSNRTG 230
            MKLGG+ SKS K+ LD++  ED L ++P   + SA     AVP   VA S  PV + VEE+++ QLTREG +E +E+KG+L +T N   + +C++ L +  PS   T QTHPKV+K ++D    L  KD +K FP +R VGVLRWS  T DES++PL I CWPE E GG++NVSMEY + RP M+L +V I IPLGSS  P+IA IDG +RH   +G LLW +D +D SN +G
Sbjct:  264 MKLGGSGSKSGKSFLDAMAAEDDLKAVP---QMSAPVDAVAVPQPQVAVSKDPVGIVVEEKIAVQLTREGNMEQLEIKGSLFVTVNDPASGRCRLRLRAL-PSSEITVQTHPKVDKKLFDQDSILGLKDSSKSFPSSR-VGVLRWSFKTQDESYLPLNITCWPEEESGGKINVSMEYSMERPEMKLENVDILIPLGSSEGPQIAHIDGQYRHKPSDGALLWHLDCIDSSNSSG 491          
BLAST of mRNA_Ecto-sp13_S_contig16912.4941.1 vs. uniprot
Match: A0A7S3H6H8_9STRA (Coatomer subunit delta n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H6H8_9STRA)

HSP 1 Score: 209 bits (533), Expect = 2.690e-61
Identity = 111/226 (49.12%), Postives = 149/226 (65.93%), Query Frame = 0
Query:    7 SKSKNMLDSLIKEDHLVSIPSASKASAGGTEAAVPAAVVAASVHPVSLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDP-SGAFTFQTHPKVNKGMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESHMPLTINCWPEPEGGGQMNVSMEYEL-VRPMELHDVRISIPLGSSAVPEIAAIDGSHRHLTQEGTLLWTMDLLDQSNRTG 230
            +K+K++ D+L++ED L  + SASK S       + AAV      PV+LS+ E++S  L+REG +E  E+KG+L+LTA  D A  C V L         F+F THPKVNK  Y+    L  K+  KGFP ARPVG+L+W+ + T E  +PL INCWPE E  GQMNVS+EY + V+ +ELHDVRI IPLG++A P I ++DGSH+H    G L+WT+DL+D SN TG
Sbjct:  257 AKNKSVEDALMREDKLAPLISASKNSVSDAPTPLTAAVAQ---QPVTLSIVEKVSATLSREGLVEMFEIKGSLTLTAADDEAALCSVQLKPASARDSVFSFNTHPKVNKAAYEKTGLLQLKEANKGFPSARPVGILKWTHSGTSEELVPLKINCWPEEESRGQMNVSIEYSMDVKGLELHDVRIVIPLGTNAAPTIVSVDGSHKHNASSGELVWTIDLIDASNTTG 479          
BLAST of mRNA_Ecto-sp13_S_contig16912.4941.1 vs. uniprot
Match: A0A7S2MQW5_9STRA (Coatomer subunit delta n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MQW5_9STRA)

HSP 1 Score: 206 bits (525), Expect = 3.320e-60
Identity = 109/231 (47.19%), Postives = 157/231 (67.97%), Query Frame = 0
Query:    1 MKLGGASKSKNMLDSLIKEDHLVSIPSASKASAGGTEAAVPAAVVA-ASVHPVSLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDPSGAFTFQTHPKVNKGMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESHMPLTINCWPEPEGGGQMNVSMEYELVRPMELHDVRISIPLGSSAVPEIAAID-GSHRHLTQEGTLLWTMDLLDQSNRT 229
            MKLGG+SK + ++D  + ED+L   P ++K +    +A  PA   A  + HPVSL +EE+++  + REG LE ME+KGT++L AN D  +KCKV+LA    +  FT+QTHPKV+K  Y+    L  KD+ KGFP  + +G+LRWS+NT D+S +P++INCWPE E G  MNV++E+     MELH+V+ISIPLG+S  PEI ++D GSH+H      L+W ++L+D  N+T
Sbjct:  243 MKLGGSSKKQQIMDKFVSEDNLA--PLSAKGNDTSGKAMTPATAAAPVATHPVSLLLEEKVAVTMNREGALELMEIKGTMALVANGDEFSKCKVILAGAK-NPLFTYQTHPKVDKKAYEKENILCLKDKNKGFPKGK-LGILRWSMNTQDDSQVPISINCWPEDEDGN-MNVNVEFNAEGDMELHNVQISIPLGTSNPPEIVSMDTGSHKHNRTNEVLIWDIELIDGQNKT 468          
BLAST of mRNA_Ecto-sp13_S_contig16912.4941.1 vs. uniprot
Match: A0A8K1CHB9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHB9_PYTOL)

HSP 1 Score: 198 bits (503), Expect = 2.310e-56
Identity = 110/232 (47.41%), Postives = 148/232 (63.79%), Query Frame = 0
Query:    1 MKLGGASKS--KNMLDSLIKEDHLVSIPSASKASAGGTEAAVPAAVVAASVHPVSLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDPSGAFTFQTHPKVNKGMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESHMPLTINCWPEPEGGGQMNVSMEYELVRPMELHDVRISIPLGSSAVPEIAAIDGSHRHLTQEGTLLWTMDLLDQSNRTG 230
            MKLGGASKS  K+ LD++  ED L  IP  S      T+   P   V  S  P+ + VEE+++  L REGTLE +EVKG+L ++ N   +  C++ L  +  +G  TFQTHPKV+K ++D    L  KD  K FP AR V VLRWSL T DES +PL I CWPE +GGG++NV++EY + R M L +V I IPLGS   P++A +DG  +H + EG+LLW +D +D SN +G
Sbjct:  319 MKLGGASKSTGKSFLDAMAAEDDLKEIPPMSAPVQAVTK---PEPTVTVSHDPIGVVVEEKITVVLNREGTLEQLEVKGSLFVSVNDQASACCRLKLRQSAANG-ITFQTHPKVDKRLFDQESVLGLKDATKPFPSAR-VAVLRWSLKTQDESFLPLNIVCWPEEQGGGKINVTIEYSMDRDMVLDNVNILIPLGSRESPQVAHVDGQFQHNSNEGSLLWHLDRVDSSNNSG 545          
BLAST of mRNA_Ecto-sp13_S_contig16912.4941.1 vs. uniprot
Match: A0A7S3XU39_HETAK (Coatomer subunit delta n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU39_HETAK)

HSP 1 Score: 189 bits (479), Expect = 3.120e-56
Identity = 96/202 (47.52%), Postives = 135/202 (66.83%), Query Frame = 0
Query:   34 GGTEAAVPAAVVAASVHPVSLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDPSGAFTFQTHPKVNKGMYDSAKTLASKDQAKGFPVARPVGVLRWS----LNTTDESHMPLTINCWPEPEGGGQMNVSMEYELVRP-MELHDVRISIPLGSSAVPEIAAIDGSHRHLTQEGTLLWTMDLLDQSNRTG 230
            G  E A       A  HP++   EERL+ QL+REG +E+++++GTL++TA  + A++ +V+L   D SG FT+Q HPKV++  +D  + LA KD AKGFP+ R +G+LRWS    +       +PL+INCWPE EG G M VS+EY L RP M LHDV +++PLG++  P I  +DG+ RH  +EGTL W +DL+D SNRTG
Sbjct:    4 GAAEGAPXXXAAPALAHPLNFVAEERLTAQLSREGAVETVDLRGTLTVTALQEAASRSRVLL-KVDESGKFTYQPHPKVDRAAFDGGRALAMKDPAKGFPLERALGLLRWSAAGAMGGGAGLKVPLSINCWPEEEGRGAMAVSIEYSLERPDMRLHDVVVTVPLGTAEQPTIQDVDGNVRHDAREGTLSWLVDLIDSSNRTG 204          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16912.4941.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G727_ECTSI1.790e-15399.13Coatomer subunit delta n=2 Tax=Ectocarpus TaxID=28... [more]
A0A835ZBZ4_9STRA2.470e-7456.17Coatomer subunit delta n=1 Tax=Tribonema minus Tax... [more]
A0A4D9DAV0_9STRA1.650e-6550.21Coatomer subunit delta n=1 Tax=Nannochloropsis sal... [more]
F0YG49_AURAN3.820e-6349.57Coatomer subunit delta n=1 Tax=Aureococcus anophag... [more]
A0A7S2HPZ3_9STRA3.500e-6247.19Coatomer subunit delta n=1 Tax=Dictyocha speculum ... [more]
A0A024GKI5_9STRA2.500e-6150.21Coatomer subunit delta n=3 Tax=Albugo candida TaxI... [more]
A0A7S3H6H8_9STRA2.690e-6149.12Coatomer subunit delta n=1 Tax=Spumella elongata T... [more]
A0A7S2MQW5_9STRA3.320e-6047.19Coatomer subunit delta n=1 Tax=Dictyocha speculum ... [more]
A0A8K1CHB9_PYTOL2.310e-5647.41Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S3XU39_HETAK3.120e-5647.52Coatomer subunit delta n=1 Tax=Heterosigma akashiw... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028565Mu homology domainPFAMPF00928Adap_comp_subcoord: 51..228
e-value: 1.8E-16
score: 60.3
IPR028565Mu homology domainPROSITEPS51072MHDcoord: 49..230
score: 20.967
NoneNo IPR availablePANTHERPTHR10121:SF0COATOMER SUBUNIT DELTAcoord: 1..230
IPR027059Coatomer delta subunitPANTHERPTHR10121COATOMER SUBUNIT DELTAcoord: 1..230
IPR036168AP-2 complex subunit mu, C-terminal superfamilySUPERFAMILY49447Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptorcoord: 52..227

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16912contigEcto-sp13_S_contig16912:509..3803 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16912.4941.1mRNA_Ecto-sp13_S_contig16912.4941.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16912 503..3803 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16912.4941.1 ID=prot_Ecto-sp13_S_contig16912.4941.1|Name=mRNA_Ecto-sp13_S_contig16912.4941.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=230bp
MKLGGASKSKNMLDSLIKEDHLVSIPSASKASAGGTEAAVPAAVVAASVH
PVSLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDP
SGAFTFQTHPKVNKGMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDE
SHMPLTINCWPEPEGGGQMNVSMEYELVRPMELHDVRISIPLGSSAVPEI
AAIDGSHRHLTQEGTLLWTMDLLDQSNRTG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028565MHD
IPR027059Coatomer_dsu
IPR036168AP2_Mu_C_sf