prot_Ecto-sp13_S_contig169.4931.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig169.4931.1
Unique Nameprot_Ecto-sp13_S_contig169.4931.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length96
Homology
BLAST of mRNA_Ecto-sp13_S_contig169.4931.1 vs. uniprot
Match: D7FNU5_ECTSI (Elongin-C n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNU5_ECTSI)

HSP 1 Score: 191 bits (486), Expect = 9.140e-62
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0
Query:    1 QEFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC 95
            QEFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC
Sbjct:    6 QEFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC 100          
BLAST of mRNA_Ecto-sp13_S_contig169.4931.1 vs. uniprot
Match: A0A6U1KLA4_9STRA (Elongin-C n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6U1KLA4_9STRA)

HSP 1 Score: 138 bits (347), Expect = 2.500e-40
Identity = 69/94 (73.40%), Postives = 79/94 (84.04%), Query Frame = 0
Query:    2 EFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC 95
            ++VKL+SAEG EF+VDR+CA  SGTIKAMLSG F E+ SG++ F EISTPILEKVIQ+ YYK  Y NS  RIPEF IEPE+ALELLMAANFLDC
Sbjct:   26 QYVKLISAEGHEFFVDRQCAQTSGTIKAMLSGSFTES-SGEIKFPEISTPILEKVIQYFYYKASYKNSQVRIPEFAIEPEVALELLMAANFLDC 118          
BLAST of mRNA_Ecto-sp13_S_contig169.4931.1 vs. uniprot
Match: A0A1V9Z8H2_9STRA (Elongin-C n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9Z8H2_9STRA)

HSP 1 Score: 137 bits (344), Expect = 4.270e-40
Identity = 68/94 (72.34%), Postives = 81/94 (86.17%), Query Frame = 0
Query:    2 EFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC 95
            E+VKL+SAEG EF+V RKCA+VSGTIKAMLSG F E+  G+V F +IS PILEKVIQ++YYK RY+NS  RIP+F IEPE+ALELLMAAN+LDC
Sbjct:    9 EYVKLISAEGHEFFVARKCALVSGTIKAMLSGHFSES-KGEVRFPDISAPILEKVIQYMYYKKRYSNSNARIPDFGIEPEMALELLMAANYLDC 101          
BLAST of mRNA_Ecto-sp13_S_contig169.4931.1 vs. uniprot
Match: A0A6G0WB49_9STRA (Elongin-C n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WB49_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.850e-39
Identity = 65/94 (69.15%), Postives = 81/94 (86.17%), Query Frame = 0
Query:    2 EFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC 95
            ++VKL+SAEG EF+V RKCAMVSGTIKAML+G F E+  G+V F +IS PILEK+IQ+ Y+KVRY+NS  R+P+F IEPE+ALELLMAAN+LDC
Sbjct:   11 DYVKLISAEGQEFYVARKCAMVSGTIKAMLTGHFSES-KGEVRFPDISAPILEKIIQYFYFKVRYSNSNARLPDFTIEPEIALELLMAANYLDC 103          
BLAST of mRNA_Ecto-sp13_S_contig169.4931.1 vs. uniprot
Match: A0A7S2XYA0_9STRA (Elongin-C n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYA0_9STRA)

HSP 1 Score: 135 bits (339), Expect = 2.780e-39
Identity = 68/92 (73.91%), Postives = 79/92 (85.87%), Query Frame = 0
Query:    4 VKLVSAEGAEFWVDRKCAMVSGTIKAMLSGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC 95
            VKLVS+EG EF+ DR+CAMVSGTI AMLSG F E+  G+V F EIS+ ILEK+IQ+ YYKVRYTNS +RIP+F IEPE+ALELLMAANFLDC
Sbjct:   15 VKLVSSEGHEFYCDRRCAMVSGTINAMLSGQFAESR-GEVTFPEISSAILEKIIQYCYYKVRYTNSTSRIPDFPIEPEIALELLMAANFLDC 105          
BLAST of mRNA_Ecto-sp13_S_contig169.4931.1 vs. uniprot
Match: A0A1W0A8X8_9STRA (Elongin-C n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8X8_9STRA)

HSP 1 Score: 134 bits (338), Expect = 3.950e-39
Identity = 66/94 (70.21%), Postives = 81/94 (86.17%), Query Frame = 0
Query:    2 EFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC 95
            E+VKLVSAEG EF+V RKCA+VSGTIKAML G F E+  G++ F +IS PILEKVIQ++YYK RY+NS  RIPEF+IEPE++LELLMAAN+L+C
Sbjct:   13 EYVKLVSAEGHEFYVARKCALVSGTIKAMLLGQFSES-KGEIRFPDISAPILEKVIQYLYYKKRYSNSNARIPEFNIEPEMSLELLMAANYLEC 105          
BLAST of mRNA_Ecto-sp13_S_contig169.4931.1 vs. uniprot
Match: L8GYQ9_ACACA (Elongin-C n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GYQ9_ACACA)

HSP 1 Score: 134 bits (337), Expect = 5.290e-39
Identity = 70/93 (75.27%), Postives = 79/93 (84.95%), Query Frame = 0
Query:    4 VKLVSAEGAEFWVDRKCAMVSGTIKAMLSGG--FGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLD 94
            VKL+SA+G EF VDRK AMVSGTIK+MLSG   F E A G+++F EISTPILEKVIQ+ YYK+RYTNS T IPEF IEPE+ALELLMAANFLD
Sbjct:   10 VKLISADGHEFVVDRKAAMVSGTIKSMLSGPGTFTEQAMGEINFREISTPILEKVIQYFYYKLRYTNSTTEIPEFPIEPEVALELLMAANFLD 102          
BLAST of mRNA_Ecto-sp13_S_contig169.4931.1 vs. uniprot
Match: F0YER3_AURAN (Elongin-C (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YER3_AURAN)

HSP 1 Score: 133 bits (335), Expect = 7.670e-39
Identity = 67/92 (72.83%), Postives = 75/92 (81.52%), Query Frame = 0
Query:    8 SAEGAEFWVDRKCAMVSGTIKAMLSGGFGEA----ASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC 95
            SAEG EFWVDRKCA  SGTIKAMLSG  G      +SG++ F EISTPILEKVIQ+ YYK+RYTNS  RIPEF I+PE+ALELLMA+NFLDC
Sbjct:    1 SAEGHEFWVDRKCANTSGTIKAMLSGPRGPRQFTESSGEIKFPEISTPILEKVIQYFYYKLRYTNSQVRIPEFQIDPEMALELLMASNFLDC 92          
BLAST of mRNA_Ecto-sp13_S_contig169.4931.1 vs. uniprot
Match: K8Z122_NANGC (Elongin-C n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z122_NANGC)

HSP 1 Score: 133 bits (334), Expect = 1.340e-38
Identity = 65/94 (69.15%), Postives = 81/94 (86.17%), Query Frame = 0
Query:    2 EFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC 95
            ++VKL+SAEG EF VDRKCA VS TI+AML+G F E+  G+++F EIST ILEKVIQ++YYKVRYTNS  ++P+F +EPE+ALELLMAANFLDC
Sbjct:    7 KYVKLISAEGHEFIVDRKCACVSKTIEAMLAGNFAES-KGEINFPEISTNILEKVIQYLYYKVRYTNSPQKVPDFKMEPEIALELLMAANFLDC 99          
BLAST of mRNA_Ecto-sp13_S_contig169.4931.1 vs. uniprot
Match: A0A485K8T6_9STRA (Elongin-C n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K8T6_9STRA)

HSP 1 Score: 131 bits (330), Expect = 6.540e-38
Identity = 63/94 (67.02%), Postives = 79/94 (84.04%), Query Frame = 0
Query:    2 EFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC 95
            E+VKL+SAEG EF++ RKCAMVSGTIKAML+G F E+  G++ F +I   +LEKVIQ++YYK RY+NS  RIP+F IEPE+ALELLMAAN+LDC
Sbjct:   13 EYVKLISAEGHEFYIARKCAMVSGTIKAMLTGHFSES-KGEIRFPDIGASVLEKVIQYMYYKKRYSNSNARIPDFAIEPEIALELLMAANYLDC 105          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig169.4931.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNU5_ECTSI9.140e-62100.00Elongin-C n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN... [more]
A0A6U1KLA4_9STRA2.500e-4073.40Elongin-C n=1 Tax=Pelagomonas calceolata TaxID=356... [more]
A0A1V9Z8H2_9STRA4.270e-4072.34Elongin-C n=3 Tax=Saprolegniaceae TaxID=4764 RepID... [more]
A0A6G0WB49_9STRA1.850e-3969.15Elongin-C n=1 Tax=Aphanomyces euteiches TaxID=1008... [more]
A0A7S2XYA0_9STRA2.780e-3973.91Elongin-C n=1 Tax=Fibrocapsa japonica TaxID=94617 ... [more]
A0A1W0A8X8_9STRA3.950e-3970.21Elongin-C n=1 Tax=Thraustotheca clavata TaxID=7455... [more]
L8GYQ9_ACACA5.290e-3975.27Elongin-C n=1 Tax=Acanthamoeba castellanii str. Ne... [more]
F0YER3_AURAN7.670e-3972.83Elongin-C (Fragment) n=1 Tax=Aureococcus anophagef... [more]
K8Z122_NANGC1.340e-3869.15Elongin-C n=2 Tax=Monodopsidaceae TaxID=425072 Rep... [more]
A0A485K8T6_9STRA6.540e-3867.02Elongin-C n=1 Tax=Aphanomyces stellatus TaxID=1203... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001232S-phase kinase-associated protein 1-likeSMARTSM00512skp1_3coord: 1..95
e-value: 1.5E-13
score: 61.0
IPR016073SKP1 component, POZ domainPFAMPF03931Skp1_POZcoord: 3..63
e-value: 2.7E-10
score: 40.3
NoneNo IPR availableGENE3D3.30.710.10coord: 1..95
e-value: 8.7E-30
score: 105.1
IPR039948Elongin-CPANTHERPTHR20648FAMILY NOT NAMEDcoord: 2..95
IPR011333SKP1/BTB/POZ domain superfamilySUPERFAMILY54695POZ domaincoord: 3..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig169contigEcto-sp13_S_contig169:17462..18569 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig169.4931.1mRNA_Ecto-sp13_S_contig169.4931.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig169 17462..18569 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig169.4931.1 ID=prot_Ecto-sp13_S_contig169.4931.1|Name=mRNA_Ecto-sp13_S_contig169.4931.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=96bp
QEFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSGGFGEAASGQVHFAEIST
PILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001232SKP1-like
IPR016073Skp1_comp_POZ
IPR039948ELC1
IPR011333SKP1/BTB/POZ_sf