prot_Ecto-sp13_S_contig16895.4927.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16895.4927.1
Unique Nameprot_Ecto-sp13_S_contig16895.4927.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length230
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig16895.4927.1 vs. uniprot
Match: A0A6H5KHR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHR5_9PHAE)

HSP 1 Score: 369 bits (947), Expect = 1.250e-121
Identity = 215/230 (93.48%), Postives = 221/230 (96.09%), Query Frame = 0 
Query:    1 QVRAVVFGGCKLAPDGVFSCSNDLYAYDLATNRWEEIVPKSDADAFACEADDTGEAPALRPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAVCPGVSTSRPLGRHAHASAYIESKTDNVNALFIFGGRENMDDLVPLGDLWMFDFTTMRWSEMTPDPKKPAPCNRFYHSLTVWQGGVGDGVASLVVFGGETITRTGQTVFMNDVWLYTPQTGAWREV 230
            +VRAVVFGGCKLAPDGVFSCSNDLYAYDLATNRWEEIVPKSDADAFACEADDTGE+PALRPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     KAVCPGVSTSRPLGRHAHASAYIESKTDN+NALFIFGGRENMD+L PLGDLWMFDFTTMRW E+TPD  KPAPCNRFYHSLTVWQGGVGDGVASLVVFGGETITRTGQTVFMNDVWLYTPQTGAWR+V
Sbjct:  333 EVRAVVFGGCKLAPDGVFSCSNDLYAYDLATNRWEEIVPKSDADAFACEADDTGESPALRPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWDKK-KAVCPGVSTSRPLGRHAHASAYIESKTDNMNALFIFGGRENMDELTPLGDLWMFDFTTMRWREITPDSNKPAPCNRFYHSLTVWQGGVGDGVASLVVFGGETITRTGQTVFMNDVWLYTPQTGAWRQV 561
[Close]
BLAST of mRNA_Ecto-sp13_S_contig16895.4927.1 vs. uniprot
Match: D7G1X6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1X6_ECTSI)

HSP 1 Score: 331 bits (849), Expect = 3.740e-110
Identity = 166/230 (72.17%), Postives = 170/230 (73.91%), Query Frame = 0 
Query:    1 QVRAVVFGGCKLAPDGVFSCSNDLYAYDLATNRWEEIVPKSDADAFACEADDTGEAPALRPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAVCPGVSTSRPLGRHAHASAYIESKTDNVNALFIFGGRENMDDLVPLGDLWMFDFTTMRWSEMTPDPKKPAPCNRFYHSLTVWQGGVGDGVASLVVFGGETITRTGQTVFMNDVWLYTPQTGAWREV 230
            +VRAVVFGGCKLAPDGVFSCSNDLYAYDLATNRWEEIVPKSDADAFACEADDTGE+PALR                                                         H HASAYIESKTDN+NALFIFGGRENMDDL PLGDLWMFDFTTMRWSE+TPD KKPAPCNRFYHSLTVWQGGVGDGVASLVVFGGETITRTGQTVFMNDVWLYTPQTGAWREV
Sbjct:  239 EVRAVVFGGCKLAPDGVFSCSNDLYAYDLATNRWEEIVPKSDADAFACEADDTGESPALR---------------------------------------------------------HGHASAYIESKTDNMNALFIFGGRENMDDLTPLGDLWMFDFTTMRWSEITPDSKKPAPCNRFYHSLTVWQGGVGDGVASLVVFGGETITRTGQTVFMNDVWLYTPQTGAWREV 411
[Close]
BLAST of mRNA_Ecto-sp13_S_contig16895.4927.1 vs. uniprot
Match: A0A836CN12_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN12_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 4.010e-18
Identity = 94/229 (41.05%), Postives = 118/229 (51.53%), Query Frame = 0 
Query:    3 RAVVFGGCKLAPDGVFSCSNDLYAYDLATNRWEEIVPKSDADAFACEADDTGEAPALRPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAVCPGVSTSRPLGRHAHASAYIESKTDNVNALFIFGGRENMDDLVPLGDLWMFDFTTMRWSEMTPDPK-KPAPCNRFYHSLTVWQGGVGDGVASLVVFGGETITRTGQTVFMNDVWLYTPQTGAWREV 230
            R V +GG     +G     +DL+AYD A + WE + P  DA+         GE   +R                 XXXXXXXXXXXXXXXXXXXXXXXXX           PL R  H + +++     +++LFI GGR        L D+W F+F T RWS+    P  +P P  RF H   VWQGG GDG   LVV GGE I  +G     NDVW+Y+ Q  +WR+V
Sbjct:  254 RLVAYGGRHCGSEGC-QLFSDLWAYDAAADAWERLDPVMDAE---------GETGIVR---------------EEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLPREQHGAVFVQE----LDSLFIHGGRWTDQPGPALDDIWSFNFKTRRWSQHWQLPNGRPPP--RFGHGFAVWQGGQGDGSPGLVVIGGEVI-ESGARYLSNDVWMYSIQDRSWRQV 450
[Close]
BLAST of mRNA_Ecto-sp13_S_contig16895.4927.1 vs. uniprot
Match: UPI00192F711E (multiple epidermal growth factor-like domains protein 8 n=1 Tax=Crotalus tigris TaxID=88082 RepID=UPI00192F711E)

HSP 1 Score: 65.9 bits (159), Expect = 9.490e-9
Identity = 42/114 (36.84%), Postives = 57/114 (50.00%), Query Frame = 0 
Query:  117 RHAHASAYIESKTDNVNALFIFGGRENMDDLVPLGDLWMFDFTTMRWSEMTPDPKKPAPCNRFYHSLTVWQGGVGDGVASLVVFGGETITRTGQTVFMNDVWLYTPQTGAWREV 230
            R A A A++ S       L+IFGG   +D    LGDL  ++FTT  W +       P+P  R  H+   W+G       SL++FGGE  T        NDVW+Y P+ G WRE+
Sbjct:  228 RTAAAGAFLPS----TGGLYIFGG---LDLNTALGDLVFYNFTTNTWHQRV---LSPSPTARHSHTAVAWEG-------SLILFGGELSTG----FLTNDVWMYLPREGYWREL 320
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16895.4927.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KHR5_9PHAE1.250e-12193.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1X6_ECTSI3.740e-11072.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CN12_9STRA4.010e-1841.05Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
UPI00192F711E9.490e-936.84multiple epidermal growth factor-like domains prot... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13415Kelch_3coord: 196..229
e-value: 1.2E-4
score: 22.3
NoneNo IPR availablePFAMPF13418Kelch_4coord: 133..170
e-value: 2.2E-5
score: 24.4
coord: 4..37
e-value: 6.4E-6
score: 26.1
NoneNo IPR availablePANTHERPTHR23244KELCH REPEAT DOMAINcoord: 107..227
coord: 3..64
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 98..230
e-value: 5.4E-13
score: 50.4
IPR011043Galactose oxidase/kelch, beta-propellerSUPERFAMILY50965Galactose oxidase, central domaincoord: 5..230

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16895contigEcto-sp13_S_contig16895:1398..3246 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16895.4927.1mRNA_Ecto-sp13_S_contig16895.4927.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16895 1398..3246 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16895.4927.1 ID=prot_Ecto-sp13_S_contig16895.4927.1|Name=mRNA_Ecto-sp13_S_contig16895.4927.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=230bp
QVRAVVFGGCKLAPDGVFSCSNDLYAYDLATNRWEEIVPKSDADAFACEA
DDTGEAPALRPAAATSSSSSSSSPYAAGNSTVGIISSGSRSGGGGGGGGG
KKKAVCPGVSTSRPLGRHAHASAYIESKTDNVNALFIFGGRENMDDLVPL
GDLWMFDFTTMRWSEMTPDPKKPAPCNRFYHSLTVWQGGVGDGVASLVVF
GGETITRTGQTVFMNDVWLYTPQTGAWREV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015915Kelch-typ_b-propeller
IPR011043Gal_Oxase/kelch_b-propeller