prot_Ecto-sp13_S_contig1689.4922.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1689.4922.1
Unique Nameprot_Ecto-sp13_S_contig1689.4922.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length305
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1689.4922.1 vs. uniprot
Match: D8LMK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMK4_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 4.300e-38
Identity = 104/140 (74.29%), Postives = 108/140 (77.14%), Query Frame = 0 
Query:  163 ESMAPIFPAHELVQAPSSPPSTQAPPTRSMRFRSSSRLAGGRGSDALSSRTXXXXXXXSRSDHRASRRTARTRKGSFSSSRRAGSVSSRTRSKARTAVTSKVTCAARANVQSGRTVLGGSTAR-ATRFNVRAGKVRLCTD 301
            ESM  I PAH+ VQ P SPP  Q PPTRSMR RSSS L  GRGSDALSS T  XXXXXSR+DH ASRR  RT KGS SSSR AGSVSSRTRSKARTA TS+V C+ARA VQSGRTVLGGSTAR  TR NVRAGKV    D
Sbjct:  159 ESMMSIIPAHQPVQTPPSPPIIQPPPTRSMRLRSSSCLVEGRGSDALSS-TTTXXXXXSRNDHLASRRQDRTPKGSCSSSRSAGSVSSRTRSKARTAATSRVMCSARATVQSGRTVLGGSTARRVTRSNVRAGKVLWTVD 297
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1689.4922.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LMK4_ECTSI4.300e-3874.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1689contigEcto-sp13_S_contig1689:7400..8807 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1689.4922.1mRNA_Ecto-sp13_S_contig1689.4922.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1689 7400..8807 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1689.4922.1 ID=prot_Ecto-sp13_S_contig1689.4922.1|Name=mRNA_Ecto-sp13_S_contig1689.4922.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=305bp
LLAPPRRREVTWADPLEQVREIPARGPSVTWADPLEQVREIPARGPNVTW
ADPLEQVREIPARGPIVTWADPLEQVREIPARGPNVTWADPLEQVREIPA
RGPNVTWADPLEQVHEIPARGPNVTWADPLEQPLVEVREIPARGPVVTWA
PPVVEVREIPASESMAPIFPAHELVQAPSSPPSTQAPPTRSMRFRSSSRL
AGGRGSDALSSRTTTTTTTTSRSDHRASRRTARTRKGSFSSSRRAGSVSS
RTRSKARTAVTSKVTCAARANVQSGRTVLGGSTARATRFNVRAGKVRLCT
DTIR*
back to top