prot_Ecto-sp13_S_contig1686.4902.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1686.4902.1
Unique Nameprot_Ecto-sp13_S_contig1686.4902.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1705
Homology
BLAST of mRNA_Ecto-sp13_S_contig1686.4902.1 vs. uniprot
Match: A0A6H5KGA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGA5_9PHAE)

HSP 1 Score: 1368 bits (3542), Expect = 0.000e+0
Identity = 968/1165 (83.09%), Postives = 984/1165 (84.46%), Query Frame = 0
Query:    1 PLSFVPLAPAPPLLSGATNTTQPKTSSGGIDTVSSASSEALNGGRDSRRAQAAAMAGVAPSAQSPNGVSKGDDLAGPEGGGRDTPSPTLALARAGLRSVPKEHRREPREVAAAAAEEAISMVGKSVERGSGXXXXXXXXXXXXXXXXXXVHTDKEDHSGGRSSPDSFYSDGSGDSSRGSGSATRRTHSKVLELEERRAALVXXXXXXXXXXXXXXXRLLSQASRDANGFLRGEVTRPKPNKLLARSKTTVXXXXXXXXXXXXXXRSVAAAFFSNRPQGSGEDGRCEVIPLRPEMRARQEQRKPSXXXXXXXXXXXXXXXXXXXXGGEDGTTPTTMTATATASAATQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPSAATQXXXXXXXXXEKLVVKCPMSSSS-KPRGVAPREYSPPPPGVKPTSPFRAGAATGGSVRSLVPGPRLVLAGASFDADPKVSTAAPAVGGGGEKRHGGMLVVSRGSMDDLPPAEMGALGVSLVCTMCGRKERKRDAGVVKEANGGVGDGRKGGKGVEMARCARCRKGCCQACLKHLPAHCRGPKIVIPVCGTCARGVDFENRWHHHLLATSRDRDRCNGVSHLPAAAGEREQGGGGRSRSVSPRADSACGSSPDQSPERKSQAGADGKRGAGLRGSGRPEQKALGSTSSSLLRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQLPPAGSRVFKALSLPIARGGXXXXXERGNIGRPHSIPRCSSPEREXXXXXXXXXXXXXXXXXXIAATSAMAWFGSSIGSALSSLASSGGVGNGSTLASAFAPKDRSGGGGATPPSARLTPASPASTSSSPDQDLELPPQAIIPGGSTSTTKPWATAGAPMALSVVTAPAAADGGRGKARAILPPRAGGRASPLDNGRFGRDPTECPCGAAALYREVMEVSGKGMAVAMVTAGGEAVGPEEAAXXXXXXXXXXXXXXXXXXXXXXXXXATKALAYADLRAKAFEFLRERGEAAKSEQAGLSPTADANPSRKARSLPEAFLSVRGGDSSRLAATTRPALTAAAATRDGSNSNDVRSLAVTAGGNTLK--VPSTGAGVGVRGVLQSVGSPTASSSSSFSCPRVDSLPLVAAGAGKAPEATLLSQMDLNEVVVSCFSETTNTMT 1162
            PLSFVPLAPAPPLLSGATNT QPKTS GGIDTVSSASSEALNGGRDSR AQAAAMAGVAPSAQSPNGVSKGDDLAGPEGGGRDTPSPTLALARAGLRSVPKEHRREPREVAAAAAE+AISMV KSVERGSGXXXXXXXXXXXXXXXXXXVHTDKE HSGGRSSPDSFYSDGSGDSSR SGS TRRTH KVLELEE      XXXXXXXXXXXXXXXRLLSQASRDANGFLRGEVTRPKPNKLLARSKTTVXXXXXXXXXX    RSVAAAFF+NRPQGSGED  CEVIPLRPEMRARQE RK                                            XXXXXXXXXXXXXXXXXXXXXXXXXXXXX       XXXXXXXXX KLVV+ PMSSSS KPRGV   EY PPPPGVKPTSPF AGAATGGSVRSLVPGPRLVLAGASFDADPKV T APAVGGGGEKRHGGML+VSRGSMDDLPPAEMGALGVSLVCTMCGRKERKRDAGVVKEANGGVGDGRKGG           RKGCCQACLKHLPAHCRGPKIVIPVCGTCARGVDFENRWHHHLLATSRDRDRCNGVSHL AAAGER+QGGG R RSVSPRADSACGSSP QSP+R+S+AGADGKRGA LRGSGR EQKALGSTSSSLLRA                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  P+LPPAGSRVFK LSLPIARG XXXXX   N  RPHSIP CSSPERE                  IAA+SAMAWFGSSIGSALSSLASSGGVGNGSTLASAFAPKDRSGGGGATPPSARLTPASP         DLE PPQAIIPG ST  TKPWATAG PMALSVVTA AAADGGRGKARAILPP AGGRASPLDNGRFGRDPTECPCGAAALYREVMEVSGKGMAVAMVTAGGEAVGPEEAA XXXXXXXXXXXXXXXXXXXXXXX A KAL YADL+AKAFEFLRERGEAAKSEQAGLSPTADANP RK RSLPEAFLSVR GDSSRLAATT PA TAAAATRDG+NS+DVRSLAV  G NTL   V ST AGVGV GVLQSVGSP+ASSS S++ PRVDSLP VAAGAGKAPEA LLSQMDLNEVVVSCFSETTNTMT
Sbjct:  621 PLSFVPLAPAPPLLSGATNTAQPKTS-GGIDTVSSASSEALNGGRDSRGAQAAAMAGVAPSAQSPNGVSKGDDLAGPEGGGRDTPSPTLALARAGLRSVPKEHRREPREVAAAAAEKAISMVVKSVERGSGXXXXXXXXXXXXXXXXXXVHTDKEGHSGGRSSPDSFYSDGSGDSSRESGSTTRRTHRKVLELEEXXXXXXXXXXXXXXXXXXXXXRLLSQASRDANGFLRGEVTRPKPNKLLARSKTTVXXXXXXXXXXKLAGRSVAAAFFTNRPQGSGEDSPCEVIPLRPEMRARQEPRK-------------------------------------LPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLVVQFPMSSSSSKPRGVTATEYLPPPPGVKPTSPFGAGAATGGSVRSLVPGPRLVLAGASFDADPKVVTPAPAVGGGGEKRHGGMLLVSRGSMDDLPPAEMGALGVSLVCTMCGRKERKRDAGVVKEANGGVGDGRKGGXXXXXXXXXXXRKGCCQACLKHLPAHCRGPKIVIPVCGTCARGVDFENRWHHHLLATSRDRDRCNGVSHLSAAAGERKQGGGERPRSVSPRADSACGSSPGQSPKRRSEAGADGKRGARLRGSGRAEQKALGSTSSSLLRAPSRLIRRSLSSGSSLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--PRLPPAGSRVFKVLSLPIARGXXXXXXXXXNC-RPHSIPHCSSPEREGSEEEDQAAEAATAPAPPIAASSAMAWFGSSIGSALSSLASSGGVGNGSTLASAFAPKDRSGGGGATPPSARLTPASPXXXXXXXXXDLEPPPQAIIPGSSTLATKPWATAGVPMALSVVTAAAAADGGRGKARAILPPGAGGRASPLDNGRFGRDPTECPCGAAALYREVMEVSGKGMAVAMVTAGGEAVGPEEAAAXXXXXXXXXXXXXXXXXXXXXXXRAMKALTYADLQAKAFEFLRERGEAAKSEQAGLSPTADANPPRKDRSLPEAFLSVRDGDSSRLAATTGPAPTAAAATRDGNNSSDVRSLAVAVGENTLTAVVSSTTAGVGVSGVLQSVGSPSASSSPSWTYPRVDSLPSVAAGAGKAPEAALLSQMDLNEVVVSCFSETTNTMT 1744          
BLAST of mRNA_Ecto-sp13_S_contig1686.4902.1 vs. uniprot
Match: D7G8Y2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Y2_ECTSI)

HSP 1 Score: 1292 bits (3344), Expect = 0.000e+0
Identity = 876/1153 (75.98%), Postives = 887/1153 (76.93%), Query Frame = 0
Query:    1 PLSFVPLAPAPPLLSGATNTTQPKTSSGGIDTVSSASSEALNGGRDSRRAQAAAMAGVAPSAQSPNGVSKGDDLAGPEGGGRDTPSPTLALARAGLRSVPKEHRREPREVAAAAAEEAISMVGKSVERGSGXXXXXXXXXXXXXXXXXXVHTDKEDHSGGRSSPDSFYSDGSGDSSRGSGSATRRTHSKVLELEERRAALVXXXXXXXXXXXXXXXRLLSQASRDANGFLRGEVTRPKPNKLLARSKTTVXXXXXXXXXXXXXXRSVAAAFFSNRPQGSGEDGRCEVIPLRPEMRARQEQRKPSXXXXXXXXXXXXXXXXXXXXGGEDGTTPTTMTATATASAATQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPSAATQXXXXXXXXXEKLVVKCPMSSSSKPRGVAPREYSPPPPGVKPTSPFRAGAATGGSVRSLVPGPRLVLAGASFDADPKVSTAAPAVGGGGEKRHGGMLVVSRGSMDDLPPAEMGALGVSLVCTMCGRKERKRDAGVVKEANGGVGDGRKGGKGVEMARCARCRKGCCQACLKHLPAHCRGPKIVIPVCGTCARGVDFENRWHHHLLATSRDRDRCNGVSHLPAAAGEREQGGGGRSRSVSPRADSACGSSPDQSPERKSQAGADGKRGAGLRGSGRPEQKALGSTSSSLLRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQLPPAGSRVFKALSLPIARGGXXXXXERGNIGRPHSIPRCSSPEREXXXXXXXXXXXXXXXXXXIAATSAMAWFGSSIGSALSSLASSGGVGNGSTLASAFAPKDRSGGGGAT-PPSARLTPASPASTSSSPDQDLELPPQAIIPGGSTSTTKPWATAGAPMALSVVTAPAAADGGRGKARAILPPRAGG-RASPLDNGRFGRDPTECPCGAAALYREVMEVSGKGMAVAMVTAGGEAVGPEEAAXXXXXXXXXXXXXXXXXXXXXXXXXATKALAYADLRAKAFEFLRERGEAAKSEQAGLSPTADANPSRKARSLPEAFLSVRGGDSSRLAATTRPALTAAAATRDGSNSNDVRSLAVTAGGNTLKVPSTGAG--VGVRGVLQSVGSPTASSSSSFSCPRVDSLPLVAAGAGKAPEATLLSQMDLNEV 1149
            PLSFVPLAPAPPLLSGATNT QPKTSSGGIDTVSSASSEALNGGRDSRRAQAAAMAGVAPSAQSPNGVSKGDD AGPEGGGRDTPSPTLALARAGLRSVPKEHRREPR VAAAAAE+AISMVGKSVERG G         XXXXX    VHTD+EDH+GGRSSPDSFYSDGSGDSSRG GS TRRTHSKVLELEERRA   XXXXXXXXXXXXXXXRLLSQASRDANGFLRGEVTRPKPNKLLARSKTT+              RSVAA FF+NRPQGSGED  CEVIPLRPEM                                                                                                               PRGVAPREYSPPPPGVKPTS F AGAATGGSVRSLVPGPRLVLAG SFDADPKVSTAAPAVGGGGEKRHGGML+VSRGSMDD PPAEMGALGVSLVCTMCGRKERKRDAGVVKE NGGV DGRKGGKGVEMARCARCRKGCCQACLKHLPAHCRGPKIVIPVCGTCARGVDFENRWHHHLLATSRDRDRCNGVSHLPAAAG+REQGGGGRSRSVSPRADSACGSSP QSP+R+SQAGADGKRGAGLRGSGR EQKALGSTSSSLLRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   PQLPPAGSRVFK LSLPI RGG     E GN GRPHSIPRCSSP REXXXXXXXXXXXXXXXXXX     AMAWFGSSIGSALSSLASSGGVGNGSTLASAFAPKDRSG      PPSARL            DQDLE PPQAIIPG STS TKPWATAGAPMALSVVT                       RASPLDNGRFGRDPTECPCGAAALYREVMEVSGKGMAVAMVTAGGEAVGPEEAA                    X    A KALAYADL+AKAFEFLRERGEAAKSEQAGLSPTADANPSRK RSLPEAFLSVR GDSSRLAATT P  TAAAATR G+N NDVRSLAV AG NTLKV S GAG  VGVRGVLQSVGSPTASSSS FS PRVDSLP VA GAGKAPE    SQMDLNEV
Sbjct:    2 PLSFVPLAPAPPLLSGATNTVQPKTSSGGIDTVSSASSEALNGGRDSRRAQAAAMAGVAPSAQSPNGVSKGDDPAGPEGGGRDTPSPTLALARAGLRSVPKEHRREPRAVAAAAAEKAISMVGKSVERGGGSGVEADSSSXXXXX----VHTDREDHAGGRSSPDSFYSDGSGDSSRGRGSTTRRTHSKVLELEERRAXXXXXXXXXXXXXXXXXXRLLSQASRDANGFLRGEVTRPKPNKLLARSKTTIVERTTSSSSSKLAGRSVAAVFFTNRPQGSGEDDPCEVIPLRPEM---------------------------------------------------------------------------------------------------------------PRGVAPREYSPPPPGVKPTSSFGAGAATGGSVRSLVPGPRLVLAGPSFDADPKVSTAAPAVGGGGEKRHGGMLLVSRGSMDDFPPAEMGALGVSLVCTMCGRKERKRDAGVVKEVNGGVRDGRKGGKGVEMARCARCRKGCCQACLKHLPAHCRGPKIVIPVCGTCARGVDFENRWHHHLLATSRDRDRCNGVSHLPAAAGQREQGGGGRSRSVSPRADSACGSSPGQSPQRRSQAGADGKRGAGLRGSGRAEQKALGSTSSSLLRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---PQLPPAGSRVFKVLSLPITRGGGG---EGGNNGRPHSIPRCSSPHREXXXXXXXXXXXXXXXXXXXXXXXAMAWFGSSIGSALSSLASSGGVGNGSTLASAFAPKDRSGXXXXXXPPSARLXXXXXXXXXXXXDQDLEPPPQAIIPGSSTSATKPWATAGAPMALSVVTXXXXXXXXXXXXXXXXXXXXXXXRASPLDNGRFGRDPTECPCGAAALYREVMEVSGKGMAVAMVTAGGEAVGPEEAAAELEAKAQAAHKLVRAKAYAXLLTRAMKALAYADLQAKAFEFLRERGEAAKSEQAGLSPTADANPSRKDRSLPEAFLSVRDGDSSRLAATTGPTPTAAAATRGGNNGNDVRSLAVAAGENTLKVSSAGAGXXVGVRGVLQSVGSPTASSSS-FSYPRVDSLPSVATGAGKAPETAPFSQMDLNEV 1032          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1686.4902.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KGA5_9PHAE0.000e+083.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8Y2_ECTSI0.000e+075.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1507..1594
NoneNo IPR availableCOILSCoilCoilcoord: 1185..1215
NoneNo IPR availableCOILSCoilCoilcoord: 1451..1493
NoneNo IPR availableCOILSCoilCoilcoord: 1252..1272
IPR033031SCC2/Nipped-B familyPANTHERPTHR21704NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATEDcoord: 286..1246

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1686contigEcto-sp13_S_contig1686:415..8864 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1686.4902.1mRNA_Ecto-sp13_S_contig1686.4902.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1686 415..8864 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1686.4902.1 ID=prot_Ecto-sp13_S_contig1686.4902.1|Name=mRNA_Ecto-sp13_S_contig1686.4902.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1705bp
PLSFVPLAPAPPLLSGATNTTQPKTSSGGIDTVSSASSEALNGGRDSRRA
QAAAMAGVAPSAQSPNGVSKGDDLAGPEGGGRDTPSPTLALARAGLRSVP
KEHRREPREVAAAAAEEAISMVGKSVERGSGSGVEADSSSGSGSGSGSGV
HTDKEDHSGGRSSPDSFYSDGSGDSSRGSGSATRRTHSKVLELEERRAAL
VAASLRTSALPPPPPPRLLSQASRDANGFLRGEVTRPKPNKLLARSKTTV
VETTTSSSSSKVGGRSVAAAFFSNRPQGSGEDGRCEVIPLRPEMRARQEQ
RKPSPPPPQQQQQRQQKKKLAQQTGGEDGTTPTTMTATATASAATQQQQK
KKKLTQQTGGEGTTTPTTVTATATATPSAATQQQRQQQQQQEKLVVKCPM
SSSSKPRGVAPREYSPPPPGVKPTSPFRAGAATGGSVRSLVPGPRLVLAG
ASFDADPKVSTAAPAVGGGGEKRHGGMLVVSRGSMDDLPPAEMGALGVSL
VCTMCGRKERKRDAGVVKEANGGVGDGRKGGKGVEMARCARCRKGCCQAC
LKHLPAHCRGPKIVIPVCGTCARGVDFENRWHHHLLATSRDRDRCNGVSH
LPAAAGEREQGGGGRSRSVSPRADSACGSSPDQSPERKSQAGADGKRGAG
LRGSGRPEQKALGSTSSSLLRASSRLIRRSLSSSSSMLGGAPPLPQTAAA
QTAPMAVDDSSVGAPPQQQQQQPQLPPAGSRVFKALSLPIARGGGGGGGE
RGNIGRPHSIPRCSSPEREEEEEEDQAAEAATAAAPPIAATSAMAWFGSS
IGSALSSLASSGGVGNGSTLASAFAPKDRSGGGGATPPSARLTPASPAST
SSSPDQDLELPPQAIIPGGSTSTTKPWATAGAPMALSVVTAPAAADGGRG
KARAILPPRAGGRASPLDNGRFGRDPTECPCGAAALYREVMEVSGKGMAV
AMVTAGGEAVGPEEAAAELEAKAQAAHKLVRAKAYAHLLTRATKALAYAD
LRAKAFEFLRERGEAAKSEQAGLSPTADANPSRKARSLPEAFLSVRGGDS
SRLAATTRPALTAAAATRDGSNSNDVRSLAVTAGGNTLKVPSTGAGVGVR
GVLQSVGSPTASSSSSFSCPRVDSLPLVAAGAGKAPEATLLSQMDLNEVV
VSCFSETTNTMTTAAASESDSPRRRFSSDDGGVAVKGSGQEEQQQEEQEE
EEEQEEEEQEEERVAGASGARARRGGGKKDETMGPNAEGETSTAKASHSD
RRRRQSQQQQQLQQQQQQQQQQQRPQQQQPQQQQPQQQQPQQQQQQQQQR
PQQQQQEKQPEQQHQEQQRRRRHRQQEPEQQEQQQQRSSQDQDRSSFSFG
QGAANNHAEADAGGGKGTRDNQVRVVDTVARESTVPPPSSVVSKGEGVGG
RDRGRREEALSSRRRLGGDAADGKGGGCLEEEGAPDDAQTRVRGRSSSSP
SRRKQQQKEEAEDKRQRGRRQRQKQQQQQQQQQQQQRQQEEEVGEPQREQ
PQRLKQQQPQQEELEKQQQQRQQEEEQGEEEEEAEKQHQREERQRQKQQA
LRSAERRRREEVEREGLQTTAEAIERARRLRRAALKKKKEEEEEEDGNVP
SASVAAPASASFGVGGKASTLVPAATTTTTAPATAARAGMSSFGAAGGAP
ARGLSRPAEMAAAAAAAAAAATVGGGGVGGSTRGGRGKMELSTFGDATVD
DMLKL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033031SCC2/Nipped-B