prot_Ecto-sp13_S_contig16850.4900.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16850.4900.1
Unique Nameprot_Ecto-sp13_S_contig16850.4900.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length275
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16850.4900.1 vs. uniprot
Match: D7G629_ECTSI (Hypothetical leucine rich repeat calmodulin binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G629_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 1.680e-56
Identity = 97/102 (95.10%), Postives = 99/102 (97.06%), Query Frame = 0 
Query:  174 MQGVQRARFCHNRKDVEDTYLPGDDALYRLNDGAPRDGRLDLSGWGIRDEDMPGIATVVLANVDAKADTGGVTSLVLDKCWRLTDEGVEALAKHLLEQTTSP 275
            MQGVQRARFCHNRKDVEDTYLPGDDALYRLNDGAPRDGRLDLSGWGIRDEDMPGIATV LANVDAKADTGGVTSLVLDKCWRLTD+GVEALAK  L+QTTSP
Sbjct:    1 MQGVQRARFCHNRKDVEDTYLPGDDALYRLNDGAPRDGRLDLSGWGIRDEDMPGIATVALANVDAKADTGGVTSLVLDKCWRLTDKGVEALAKPFLDQTTSP 102
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16850.4900.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G629_ECTSI1.680e-5695.10Hypothetical leucine rich repeat calmodulin bindin... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16850contigEcto-sp13_S_contig16850:332..3506 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16850.4900.1mRNA_Ecto-sp13_S_contig16850.4900.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16850 332..3524 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16850.4900.1 ID=prot_Ecto-sp13_S_contig16850.4900.1|Name=mRNA_Ecto-sp13_S_contig16850.4900.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=275bp
MGRKNAMKGLPTSVKGPAFVVESPLLKEAEWFGDSTHAMMADSTAPGDAA
VVPAVGTTEVFGAVGSASLKRRRKRVVDDDEEDRRASNTVRGPSRKRKND
SFGRSRTPPEPQATPPADIDTMTAGVGGDEDWHSNPSSRASARKRQPSRG
SNKGANKPQRKRIRVTPYEKVSNMQGVQRARFCHNRKDVEDTYLPGDDAL
YRLNDGAPRDGRLDLSGWGIRDEDMPGIATVVLANVDAKADTGGVTSLVL
DKCWRLTDEGVEALAKHLLEQTTSP
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