prot_Ecto-sp13_S_contig1679.4861.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1679.4861.1
Unique Nameprot_Ecto-sp13_S_contig1679.4861.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length131
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1679.4861.1 vs. uniprot
Match: D8LPV5_ECTSI (Disulfide-isomerase A6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV5_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 1.120e-38
Identity = 77/82 (93.90%), Postives = 79/82 (96.34%), Query Frame = 0 
Query:   50 QSRRSAGLSATGSRVRQEPPEPAALRLASMMSLLPGVHGSGISEGSGSGAMGAVVAVVDPARAEGILRAIRTRGKVATGVAW 131
            Q  RSAGLSATGSRVRQ+PPEPAALRLASMMSLLPGVHGSGISEGS SGAMGAVVAVVDPARAEGILRAI+TRGKVATGVAW
Sbjct:  127 QGPRSAGLSATGSRVRQKPPEPAALRLASMMSLLPGVHGSGISEGSESGAMGAVVAVVDPARAEGILRAIKTRGKVATGVAW 208
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1679.4861.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LPV5_ECTSI1.120e-3893.90Disulfide-isomerase A6 n=1 Tax=Ectocarpus siliculo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036554GHMP kinase, C-terminal domain superfamilyGENE3D3.30.70.890coord: 4..130
e-value: 4.8E-9
score: 38.1
IPR036554GHMP kinase, C-terminal domain superfamilySUPERFAMILY55060GHMP Kinase, C-terminal domaincoord: 13..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1679contigEcto-sp13_S_contig1679:4687..6385 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1679.4861.1mRNA_Ecto-sp13_S_contig1679.4861.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1679 4687..6387 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1679.4861.1 ID=prot_Ecto-sp13_S_contig1679.4861.1|Name=mRNA_Ecto-sp13_S_contig1679.4861.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=131bp
GGVGGGVGGGLSPEVLAHARHLAADVQRVADVAGAFATGNMEAVGRVMMQ
SRRSAGLSATGSRVRQEPPEPAALRLASMMSLLPGVHGSGISEGSGSGAM
GAVVAVVDPARAEGILRAIRTRGKVATGVAW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036554GHMP_kinase_C_sf