prot_Ecto-sp13_S_contig16783.4857.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16783.4857.1
Unique Nameprot_Ecto-sp13_S_contig16783.4857.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length93
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16783.4857.1 vs. uniprot
Match: D7FYR9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYR9_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 2.860e-45
Identity = 79/92 (85.87%), Postives = 84/92 (91.30%), Query Frame = 0 
Query:    1 MDEQRETMSASSDVVPGVTDPDPQGALEEGGGNPYGISAEMLELCSGKILDCGAAGSSTACPAVATTTSSGMAITVAFPDGDKTLLDWKSFF 92
            MD QR TMSASSDVV G TDPDP+GAL+EGGGNPYGISAEMLELCSGKILDCGA+GSSTACPA ATT +SG+ ITVAFPDGDK LLDWKSFF
Sbjct:  235 MDAQRGTMSASSDVVQGATDPDPKGALDEGGGNPYGISAEMLELCSGKILDCGASGSSTACPAAATTITSGIVITVAFPDGDKILLDWKSFF 326
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BLAST of mRNA_Ecto-sp13_S_contig16783.4857.1 vs. uniprot
Match: A0A6H5K7I0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7I0_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 8.030e-24
Identity = 59/103 (57.28%), Postives = 65/103 (63.11%), Query Frame = 0 
Query:    1 MDEQRETMSASSDVV-PGVTDPDPQG------------ALEEGGGNPYGISAEMLELCSGKILDCGAAGSSTACPAVATTTSSGMAITVAFPDGDKTLLDWKS 90
            +D+   T S S+  V P +  P P+G            ALEEGGGNP GISAEML LCSG IL C  A SSTACPA AT  S   A TVAFPDGD+TLLDWKS
Sbjct:   50 LDDLMSTWSTSAPAVFPSLVSPAPEGDATAELLEAMSGALEEGGGNPCGISAEMLHLCSGTILHCKPASSSTACPAAATXXSCEKASTVAFPDGDQTLLDWKS 152
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BLAST of mRNA_Ecto-sp13_S_contig16783.4857.1 vs. uniprot
Match: D7G439_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G439_ECTSI)

HSP 1 Score: 56.2 bits (134), Expect = 2.430e-7
Identity = 29/40 (72.50%), Postives = 31/40 (77.50%), Query Frame = 0 
Query:    5 RETMSASSDVVPGVTDPDPQGALEEGGGNPYGISAEMLEL 44
            RE MS SSDVVPG+TDP P   LEEG GNPYGISAE+  L
Sbjct:  204 REAMSTSSDVVPGITDPGP--TLEEGRGNPYGISAEIERL 241
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16783.4857.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FYR9_ECTSI2.860e-4585.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K7I0_9PHAE8.030e-2457.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G439_ECTSI2.430e-772.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16783contigEcto-sp13_S_contig16783:814..1092 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16783.4857.1mRNA_Ecto-sp13_S_contig16783.4857.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16783 788..2832 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16783.4857.1 ID=prot_Ecto-sp13_S_contig16783.4857.1|Name=mRNA_Ecto-sp13_S_contig16783.4857.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=93bp
MDEQRETMSASSDVVPGVTDPDPQGALEEGGGNPYGISAEMLELCSGKIL
DCGAAGSSTACPAVATTTSSGMAITVAFPDGDKTLLDWKSFF*
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