prot_Ecto-sp13_S_contig1674.4830.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1674.4830.1
Unique Nameprot_Ecto-sp13_S_contig1674.4830.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length101
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1674.4830.1 vs. uniprot
Match: D8LIV9_ECTSI (Novel protein containing a T-complex protein 11 domain (Zgc:73347) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIV9_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 8.370e-46
Identity = 91/94 (96.81%), Postives = 91/94 (96.81%), Query Frame = 0 
Query:    8 KGLRDGREELHKAVLHEAFIGLLRSTVRLDRPDAAAAAAGGVLPETLAGDGGRLAAARDDVDRVTLVATLCVLVRQVLARLRIGCPAPAMVALQ 101
            KGLRDGREELHKAVL EAF GLLRSTVRLDRPDAAAAAAGGVLPETLAGDGGRLAAARDDVDRVTLVATLCVLVRQVLARLRIGCPAPAM ALQ
Sbjct:  678 KGLRDGREELHKAVLQEAFTGLLRSTVRLDRPDAAAAAAGGVLPETLAGDGGRLAAARDDVDRVTLVATLCVLVRQVLARLRIGCPAPAMAALQ 771
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BLAST of mRNA_Ecto-sp13_S_contig1674.4830.1 vs. uniprot
Match: A0A6H5L7Q5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Q5_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 1.690e-39
Identity = 77/78 (98.72%), Postives = 77/78 (98.72%), Query Frame = 0 
Query:   24 EAFIGLLRSTVRLDRPDAAAAAAGGVLPETLAGDGGRLAAARDDVDRVTLVATLCVLVRQVLARLRIGCPAPAMVALQ 101
            EAFIGLLRSTVRLDRPDAAAAAAGGVLPETLAGDGGRLAAARDDVDRVTLVATLCVLVRQVLARLRIGCPAPAM ALQ
Sbjct:    6 EAFIGLLRSTVRLDRPDAAAAAAGGVLPETLAGDGGRLAAARDDVDRVTLVATLCVLVRQVLARLRIGCPAPAMAALQ 83
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1674.4830.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LIV9_ECTSI8.370e-4696.81Novel protein containing a T-complex protein 11 do... [more]
A0A6H5L7Q5_9PHAE1.690e-3998.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008862T-complex 11PFAMPF05794Tcp11coord: 17..88
e-value: 7.9E-7
score: 28.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1674contigEcto-sp13_S_contig1674:7916..9843 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1674.4830.1mRNA_Ecto-sp13_S_contig1674.4830.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1674 7915..9843 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1674.4830.1 ID=prot_Ecto-sp13_S_contig1674.4830.1|Name=mRNA_Ecto-sp13_S_contig1674.4830.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=101bp
GERARRAKGLRDGREELHKAVLHEAFIGLLRSTVRLDRPDAAAAAAGGVL
PETLAGDGGRLAAARDDVDRVTLVATLCVLVRQVLARLRIGCPAPAMVAL
Q
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008862Tcp11