prot_Ecto-sp13_S_contig16678.4782.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16678.4782.1
Unique Nameprot_Ecto-sp13_S_contig16678.4782.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length94
Homology
BLAST of mRNA_Ecto-sp13_S_contig16678.4782.1 vs. uniprot
Match: D7FI55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI55_ECTSI)

HSP 1 Score: 183 bits (464), Expect = 2.360e-53
Identity = 92/94 (97.87%), Postives = 94/94 (100.00%), Query Frame = 0
Query:    1 CTYDTTLVAKLLFGIFDVDKRGRVTMAELDAMVRMLYGSPDADPDLLKSLAVNGSGDEDALTFDEFLQAVQDNYEVAQPAFELQKAIRRKVLGV 94
            CTYDTTLVAK+LFGIFDVDKRGRVTMAELDAMVRMLYGSPDADPDLLK+LAVNGSGDEDALTFDEFLQAVQDNYEVAQPAFELQKAIRRKVLGV
Sbjct:  116 CTYDTTLVAKILFGIFDVDKRGRVTMAELDAMVRMLYGSPDADPDLLKALAVNGSGDEDALTFDEFLQAVQDNYEVAQPAFELQKAIRRKVLGV 209          
BLAST of mRNA_Ecto-sp13_S_contig16678.4782.1 vs. uniprot
Match: A0A7S2SD95_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SD95_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 2.520e-18
Identity = 44/102 (43.14%), Postives = 67/102 (65.69%), Query Frame = 0
Query:    1 CTYDTTLVAKLLFGIFDVDKRGRVTMAELDAMVRMLYGSPDAD-----PD---LLKSLAVNGSGDEDALTFDEFLQAVQDNYEVAQPAFELQKAIRRKVLGV 94
            CTYD  L+ KL F IFDVD++GR+ + E DA++RM+Y   D +     PD   LLK + VNG G+   +T DEF   ++ +  +  PAF+LQ+A+R+++LG+
Sbjct:  121 CTYDVRLITKLAFDIFDVDRKGRLDICECDALLRMVYDVEDLEEIEGPPDGKQLLKEIDVNGDGE---VTIDEFSDLMETHQYILSPAFDLQRALRQRLLGI 219          
BLAST of mRNA_Ecto-sp13_S_contig16678.4782.1 vs. uniprot
Match: F0YJ91_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJ91_AURAN)

HSP 1 Score: 87.4 bits (215), Expect = 4.420e-18
Identity = 40/93 (43.01%), Postives = 66/93 (70.97%), Query Frame = 0
Query:    2 TYDTTLVAKLLFGIFDVDKRGRVTMAELDAMVRMLYGSPDADPDLLKSLAVNGSGDEDALTFDEFLQAVQDNYEVAQPAFELQKAIRRKVLGV 94
            TYD +L+AKL + IFDVD+ G++ MAE DAM+RM+Y  P +DP++L+ + VN  G+   ++ +E  Q ++ +  +  PAF+LQ+ +R ++LGV
Sbjct:   24 TYDASLIAKLAYNIFDVDREGKIDMAEADAMLRMVYNVPKSDPEILEKMDVNKDGN---ISLEELEQLIEVHNYILMPAFDLQRMLRIRILGV 113          
BLAST of mRNA_Ecto-sp13_S_contig16678.4782.1 vs. uniprot
Match: A0A7S2G1T6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G1T6_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 1.590e-16
Identity = 40/102 (39.22%), Postives = 67/102 (65.69%), Query Frame = 0
Query:    1 CTYDTTLVAKLLFGIFDVDKRGRVTMAELDAMVRMLYGSPDAD--------PDLLKSLAVNGSGDEDALTFDEFLQAVQDNYEVAQPAFELQKAIRRKVLGV 94
            CTYD  L+ KL F IFD+D++G++ +AE DA++RM+Y  P  D         ++++ + VNG G+   +T DEF   ++ +  + QPA +LQ+A+R+++LGV
Sbjct:  106 CTYDVRLITKLAFDIFDIDQQGKLDLAECDALLRMVYDVPHLDNIEGPPSGKEIMELIDVNGDGE---VTIDEFSDLMETHLYILQPALDLQRALRQRLLGV 204          
BLAST of mRNA_Ecto-sp13_S_contig16678.4782.1 vs. uniprot
Match: A0A7S2CHR9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CHR9_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.470e-16
Identity = 40/102 (39.22%), Postives = 67/102 (65.69%), Query Frame = 0
Query:    1 CTYDTTLVAKLLFGIFDVDKRGRVTMAELDAMVRMLYGSPDAD--------PDLLKSLAVNGSGDEDALTFDEFLQAVQDNYEVAQPAFELQKAIRRKVLGV 94
            CTYD  L+ KL F IFD+D++G++ +AE DA++RM+Y  P  D         ++++ + VNG G+   +T DEF   ++ +  + QPA +LQ+A+R+++LGV
Sbjct:  106 CTYDVRLITKLAFDIFDIDQQGKLDLAECDALLRMVYDVPHLDNIEGPPSGKEIMELIDVNGDGE---VTIDEFSDLMETHLYILQPALDLQRALRQRLLGV 204          
BLAST of mRNA_Ecto-sp13_S_contig16678.4782.1 vs. uniprot
Match: A0A835YJN7_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJN7_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 6.530e-16
Identity = 40/76 (52.63%), Postives = 54/76 (71.05%), Query Frame = 0
Query:    1 CTYDTTLVAKLLFGIFDVDKRGRVTMAELDAMVRMLYGSPDADPDLLKSLAVNGSGDEDALTFDEFLQAVQDNYEV 76
            CTYDT L+A+ +F IFDVD R  +T+ E DA++RML GS DADP +LK LA +G GD D + +DEFL   + + +V
Sbjct:  200 CTYDTRLLARYVFLIFDVDARAFITVPECDALLRMLAGSADADPAVLKLLAPHGDGDGDGIGYDEFLAVAEKHRQV 275          
BLAST of mRNA_Ecto-sp13_S_contig16678.4782.1 vs. uniprot
Match: A0A8J2SZ55_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZ55_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 4.550e-8
Identity = 29/67 (43.28%), Postives = 46/67 (68.66%), Query Frame = 0
Query:   28 ELDAMVRMLYGSPDADPDLLKSLAVNGSGDEDALTFDEFLQAVQDNYEVAQPAFELQKAIRRKVLGV 94
            E DAM+RM+Y S  ADP LL  + +NG G+   ++ +E  Q V+++  V  PAF+LQ+ +R+++LGV
Sbjct:  162 EADAMLRMVYASRKADPLLLTQIDINGDGE---VSMEELQQTVEEDNSVLAPAFQLQRMLRQRILGV 225          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16678.4782.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FI55_ECTSI2.360e-5397.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2SD95_9STRA2.520e-1843.14Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
F0YJ91_AURAN4.420e-1843.01Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2G1T6_9STRA1.590e-1639.22Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2CHR9_9STRA2.470e-1639.22Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A835YJN7_9STRA6.530e-1652.63EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
A0A8J2SZ55_9STRA4.550e-843.28Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 3..79
e-value: 8.1E-9
score: 37.4
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 4..39
score: 8.739
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 8..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16678contigEcto-sp13_S_contig16678:1439..2767 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16678.4782.1mRNA_Ecto-sp13_S_contig16678.4782.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16678 1439..2769 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16678.4782.1 ID=prot_Ecto-sp13_S_contig16678.4782.1|Name=mRNA_Ecto-sp13_S_contig16678.4782.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=94bp
CTYDTTLVAKLLFGIFDVDKRGRVTMAELDAMVRMLYGSPDADPDLLKSL
AVNGSGDEDALTFDEFLQAVQDNYEVAQPAFELQKAIRRKVLGV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair