prot_Ecto-sp13_S_contig16676.4780.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16676.4780.1
Unique Nameprot_Ecto-sp13_S_contig16676.4780.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length104
Homology
BLAST of mRNA_Ecto-sp13_S_contig16676.4780.1 vs. uniprot
Match: D8LFY0_ECTSI (Threonine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFY0_ECTSI)

HSP 1 Score: 193 bits (490), Expect = 5.760e-56
Identity = 101/104 (97.12%), Postives = 103/104 (99.04%), Query Frame = 0
Query:    1 EEGRGNIGGDFTLQANPKFLKERSAKFDAIAARQKERLAQKPKLEITVVLPDGTEKKGVSYETTPMDIAKGISKNLAKEVVVAEVRYSSRIEDDEQNVSSADGI 104
            EEGRGNIGGDFTLQ NPKFLKERSAKFDAIAARQKERLAQKPKLEI+VVLPDGTEKKGVSYETTPMDIAKGISKNLAKEVVVAEVRYSSRIEDDEQNVSSADG+
Sbjct:   69 EEGRGNIGGDFTLQGNPKFLKERSAKFDAIAARQKERLAQKPKLEISVVLPDGTEKKGVSYETTPMDIAKGISKNLAKEVVVAEVRYSSRIEDDEQNVSSADGM 172          
BLAST of mRNA_Ecto-sp13_S_contig16676.4780.1 vs. uniprot
Match: A0A835YMV8_9STRA (Threonine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMV8_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.800e-30
Identity = 60/104 (57.69%), Postives = 83/104 (79.81%), Query Frame = 0
Query:    1 EEGRGNIGGDFTLQANPKFLKERSAKFDAIAARQKERLAQKPKLEITVVLPDGTEKKGVSYETTPMDIAKGISKNLAKEVVVAEVRYSSRIEDDEQNVSSADGI 104
            E  +G IG  FT+  +P FLK+R A F+A AA+Q+ER A KP++ IT+ LPDG+ ++G+S++TTPMDIA  ISK LAK+++V+EV YSS+IEDDE NV+SADG+
Sbjct:   55 ESAQGRIGAPFTVTKDPAFLKDRMAVFEAAAAKQQERHAAKPRVPITITLPDGSVREGISWQTTPMDIATAISKQLAKQIIVSEVTYSSKIEDDEANVASADGL 158          
BLAST of mRNA_Ecto-sp13_S_contig16676.4780.1 vs. uniprot
Match: H6WB86_VAULI (Threonine--tRNA ligase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB86_VAULI)

HSP 1 Score: 106 bits (265), Expect = 1.160e-24
Identity = 54/100 (54.00%), Postives = 72/100 (72.00%), Query Frame = 0
Query:    5 GNIGGDFTLQANPKFLKERSAKFDAIAARQKERLAQKPKLEITVVLPDGTEKKGVSYETTPMDIAKGISKNLAKEVVVAEVRYSSRIEDDEQNVSSADGI 104
            G IGG F L++NP F++ER   ++    +Q  R   KPK+EIT+ LPDG+ K G S+ TTPMDIA+ ISK +AK+V+VAEV YS +IEDDE +V  ADG+
Sbjct:   59 GRIGGSFNLESNPHFIEERKEVYEQAMKKQISRQQTKPKVEITITLPDGSTKVGTSWLTTPMDIAQSISKQMAKKVIVAEVIYSRKIEDDEVDVVGADGL 158          
BLAST of mRNA_Ecto-sp13_S_contig16676.4780.1 vs. uniprot
Match: A0A067CSB6_SAPPC (Threonine--tRNA ligase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CSB6_SAPPC)

HSP 1 Score: 96.3 bits (238), Expect = 5.110e-21
Identity = 52/96 (54.17%), Postives = 70/96 (72.92%), Query Frame = 0
Query:    7 IGGDFTLQANPKFLKERSAKFDAIAARQKERLAQKPKLEITVVLPDGTEKKGVSYETTPMDIAKGISKNLAKEVVVAEVRYSSRIEDDEQNVSSAD 102
            IGG FTL+ NP F++ R A +D + A QKE LA +P+  I + LPDGT K+GVS+ETTP+DIAKGIS+ LA  VVVA+V+Y+    +D   V++AD
Sbjct:   42 IGGAFTLEPNPAFIQRRIAVYDRVMAAQKELLAAQPRKPIKITLPDGTVKEGVSWETTPLDIAKGISQGLADSVVVAKVKYAGS-PNDPLKVTAAD 136          
BLAST of mRNA_Ecto-sp13_S_contig16676.4780.1 vs. uniprot
Match: A0A7J6PXH8_PEROL (TGS domain-containing protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6PXH8_PEROL)

HSP 1 Score: 87.8 bits (216), Expect = 5.160e-19
Identity = 51/100 (51.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query:    5 GNIGGDFTLQAN--PKFLKERSAKFDAIAARQKERLAQKPKLEITVVLPDGTEKKGVSYETTPMDIAKGISKNLAKEVVVAEVRYSSRIEDDEQNVSSAD 102
            G   GDF +  N    FLKERS  FD + A Q+ERLA  PK  IT+ LPDGT+K+G  +ETTP+DIA GISK LA  VV A+V Y+  ++  +Q V++ D
Sbjct:   22 GKFEGDFKIYPNGTAPFLKERSELFDKLYAAQEERLAALPKDPITIELPDGTKKEGHKFETTPLDIALGISKGLANSVVAAKVLYTEPVDSMDQVVAADD 121          
BLAST of mRNA_Ecto-sp13_S_contig16676.4780.1 vs. uniprot
Match: A0A1V9ZZW8_9STRA (Threonine--tRNA ligase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZW8_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 7.410e-19
Identity = 44/87 (50.57%), Postives = 63/87 (72.41%), Query Frame = 0
Query:    7 IGGDFTLQANPKFLKERSAKFDAIAARQKERLAQKPKLEITVVLPDGTEKKGVSYETTPMDIAKGISKNLAKEVVVAEVRYSSRIED 93
            IGG F+++ NP FL+ R A +D + A+QK+ LA +P+  I + LPDG  K+G+S+ETTP+DIAK IS+ LA  VVVA+V+Y+    D
Sbjct:   37 IGGPFSIEPNPAFLQRRIAVYDRVMAQQKQVLASQPRKPIKITLPDGNVKEGISWETTPLDIAKSISQGLADSVVVAKVKYAGNPHD 123          
BLAST of mRNA_Ecto-sp13_S_contig16676.4780.1 vs. uniprot
Match: A0A3R7WMR9_9STRA (Threonine--tRNA ligase n=9 Tax=Aphanomyces TaxID=100860 RepID=A0A3R7WMR9_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.900e-18
Identity = 44/87 (50.57%), Postives = 63/87 (72.41%), Query Frame = 0
Query:    7 IGGDFTLQANPKFLKERSAKFDAIAARQKERLAQKPKLEITVVLPDGTEKKGVSYETTPMDIAKGISKNLAKEVVVAEVRYSSRIED 93
            IG  FT++ NP FL+ R A +D + A+QKE +A +P+  I + LPDG  K+G+S+ETTP+DIAK IS+ LA+ VVVA+V+Y  +  D
Sbjct:  152 IGLPFTVEPNPAFLQRRIAVYDRVMAKQKEEIAAQPRKPIKITLPDGNVKEGISWETTPLDIAKAISQGLAETVVVAKVKYVGKPHD 238          
BLAST of mRNA_Ecto-sp13_S_contig16676.4780.1 vs. uniprot
Match: A0A7J6MZ35_PERCH (Threonine--tRNA ligase n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6MZ35_PERCH)

HSP 1 Score: 87.8 bits (216), Expect = 4.800e-18
Identity = 52/100 (52.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query:    5 GNIGGDFTLQAN--PKFLKERSAKFDAIAARQKERLAQKPKLEITVVLPDGTEKKGVSYETTPMDIAKGISKNLAKEVVVAEVRYSSRIEDDEQNVSSAD 102
            G   GDF +  N    FLKERS  FD + A Q+ERLA  PK  IT+ LPDGT K+G  +ETTP+DIA GISK LA  V+VA+V Y+  +E  +Q V++ D
Sbjct:   22 GKFEGDFKIYPNGTAPFLKERSELFDKLYAAQEERLAALPKDPITIELPDGTIKEGHKFETTPLDIALGISKGLANSVMVAKVLYTEPVESMDQVVAADD 121          
BLAST of mRNA_Ecto-sp13_S_contig16676.4780.1 vs. uniprot
Match: A0A485LGS8_9STRA (Threonine--tRNA ligase n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LGS8_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 8.900e-18
Identity = 44/87 (50.57%), Postives = 61/87 (70.11%), Query Frame = 0
Query:    7 IGGDFTLQANPKFLKERSAKFDAIAARQKERLAQKPKLEITVVLPDGTEKKGVSYETTPMDIAKGISKNLAKEVVVAEVRYSSRIED 93
            IG  FT++ NP FL+ R A +D I  +QK  +A +P+  I + LPDG  K+GVS+ETTP+DIAK IS+ LA+ +VVA+V+Y  R  D
Sbjct:   40 IGLPFTVEPNPAFLQRRIAVYDRIMEKQKAEIAAQPRTPIKITLPDGNVKEGVSWETTPLDIAKSISQGLAESIVVAKVKYVGRPHD 126          
BLAST of mRNA_Ecto-sp13_S_contig16676.4780.1 vs. uniprot
Match: A0A8J8P0U6_HALGN (Threonine--tRNA ligase n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8P0U6_HALGN)

HSP 1 Score: 86.3 bits (212), Expect = 1.670e-17
Identity = 40/85 (47.06%), Postives = 64/85 (75.29%), Query Frame = 0
Query:    7 IGGDFTLQANPKFLKERSAKFDAIAARQKERLAQKPKLEITVVLPDGTEKKGVSYETTPMDIAKGISKNLAKEVVVAEVRYSSRI 91
            IGGD  +  NP F+ ER A F+ + A Q+ +  + P+ +I ++LPDG EK+G S+ETTP+DIAKGIS +LA+++VV++V++ +R+
Sbjct:   38 IGGDIKMAKNPAFIPERKAIFEELYAVQQAKYKEMPRQKIRILLPDGKEKEGTSFETTPLDIAKGISNSLAEKLVVSKVKFLNRV 122          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16676.4780.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFY0_ECTSI5.760e-5697.12Threonine--tRNA ligase n=1 Tax=Ectocarpus siliculo... [more]
A0A835YMV8_9STRA1.800e-3057.69Threonine--tRNA ligase n=1 Tax=Tribonema minus Tax... [more]
H6WB86_VAULI1.160e-2454.00Threonine--tRNA ligase n=1 Tax=Vaucheria litorea T... [more]
A0A067CSB6_SAPPC5.110e-2154.17Threonine--tRNA ligase n=3 Tax=Saprolegniaceae Tax... [more]
A0A7J6PXH8_PEROL5.160e-1951.00TGS domain-containing protein n=1 Tax=Perkinsus ol... [more]
A0A1V9ZZW8_9STRA7.410e-1950.57Threonine--tRNA ligase n=1 Tax=Thraustotheca clava... [more]
A0A3R7WMR9_9STRA1.900e-1850.57Threonine--tRNA ligase n=9 Tax=Aphanomyces TaxID=1... [more]
A0A7J6MZ35_PERCH4.800e-1852.00Threonine--tRNA ligase n=1 Tax=Perkinsus chesapeak... [more]
A0A485LGS8_9STRA8.900e-1850.57Threonine--tRNA ligase n=2 Tax=Aphanomyces TaxID=1... [more]
A0A8J8P0U6_HALGN1.670e-1747.06Threonine--tRNA ligase n=1 Tax=Halteria grandinell... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004095TGSPFAMPF02824TGScoord: 46..85
e-value: 7.9E-7
score: 29.0
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 45..90
e-value: 2.2E-14
score: 55.4
IPR002320Threonine-tRNA ligase, class IIaPANTHERPTHR11451TRNA SYNTHETASE-RELATEDcoord: 15..86
NoneNo IPR availablePANTHERPTHR11451:SF46FI05224Pcoord: 15..86
IPR012676TGS-likeSUPERFAMILY81271TGS-likecoord: 46..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16676contigEcto-sp13_S_contig16676:33..2771 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16676.4780.1mRNA_Ecto-sp13_S_contig16676.4780.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16676 31..2771 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16676.4780.1 ID=prot_Ecto-sp13_S_contig16676.4780.1|Name=mRNA_Ecto-sp13_S_contig16676.4780.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=104bp
EEGRGNIGGDFTLQANPKFLKERSAKFDAIAARQKERLAQKPKLEITVVL
PDGTEKKGVSYETTPMDIAKGISKNLAKEVVVAEVRYSSRIEDDEQNVSS
ADGI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004095TGS
IPR012675Beta-grasp_dom_sf
IPR002320Thr-tRNA-ligase_IIa
IPR012676TGS-like