prot_Ecto-sp13_S_contig16651.4768.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16651.4768.1
Unique Nameprot_Ecto-sp13_S_contig16651.4768.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length172
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16651.4768.1 vs. uniprot
Match: D8LPI8_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPI8_ECTSI)

HSP 1 Score: 313 bits (802), Expect = 1.460e-107
Identity = 152/168 (90.48%), Postives = 156/168 (92.86%), Query Frame = 0 
Query:    1 LQPVDFRGEDIFHDLEVEGRPSQIHGRGTFSKNGASENDVLLSVLLPSKAVEKGFAR--DGGYDCNQHVMHKDGLGVMFIDPAARMRGNLGACKEDFKLGVLILLNHSDDANIAISAREAAIPDWYEALGEKFTTWYECMLVATRKIGVGEEMTIEYAVAPKGIRPAK 166
            L PVDFRGEDIFHDL+VEGRPSQIHGRGTFSKNGAS+NDVLLSV+LPSKAVEKGFA   DGGYDCNQHVMHKDGLGVMFIDP ARMRGNLGACKEDFKLGVL LLNHSDD NIAIS REAAIPDWYEALGEKFTTWYEC LVATR IGV EEMTIEYA+APKGIR AK
Sbjct:    5 LTPVDFRGEDIFHDLDVEGRPSQIHGRGTFSKNGASKNDVLLSVILPSKAVEKGFASNSDGGYDCNQHVMHKDGLGVMFIDPGARMRGNLGACKEDFKLGVLRLLNHSDDPNIAISTREAAIPDWYEALGEKFTTWYECTLVATRAIGVDEEMTIEYALAPKGIRLAK 172
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16651.4768.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LPI8_ECTSI1.460e-10790.48N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.170.270.10coord: 14..158
e-value: 6.3E-8
score: 34.8
NoneNo IPR availableSUPERFAMILY82199SET domaincoord: 17..160
IPR001214SET domainPFAMPF00856SETcoord: 68..155
e-value: 1.6E-5
score: 25.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16651contigEcto-sp13_S_contig16651:2519..3034 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16651.4768.1mRNA_Ecto-sp13_S_contig16651.4768.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16651 2519..3034 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16651.4768.1 ID=prot_Ecto-sp13_S_contig16651.4768.1|Name=mRNA_Ecto-sp13_S_contig16651.4768.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=172bp
LQPVDFRGEDIFHDLEVEGRPSQIHGRGTFSKNGASENDVLLSVLLPSKA
VEKGFARDGGYDCNQHVMHKDGLGVMFIDPAARMRGNLGACKEDFKLGVL
ILLNHSDDANIAISAREAAIPDWYEALGEKFTTWYECMLVATRKIGVGEE
MTIEYAVAPKGIRPAKKKRRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001214SET_dom