prot_Ecto-sp13_S_contig16576.4724.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16576.4724.1
Unique Nameprot_Ecto-sp13_S_contig16576.4724.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length86
Homology
BLAST of mRNA_Ecto-sp13_S_contig16576.4724.1 vs. uniprot
Match: A0A6H5L5U1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5U1_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 1.500e-48
Identity = 85/86 (98.84%), Postives = 85/86 (98.84%), Query Frame = 0
Query:    1 MASIAQRLVTLCATLGEFPHVRFAADGGGRTEGVARTFQANMEELVSNSPTWTFRGQDSRASDGGRATLLLLDRADDPLSPLMHEF 86
            MASIAQRLVTLCATLGEFPHVRFAADGGGRTEGVA TFQANMEELVSNSPTWTFRGQDSRASDGGRATLLLLDRADDPLSPLMHEF
Sbjct:  301 MASIAQRLVTLCATLGEFPHVRFAADGGGRTEGVATTFQANMEELVSNSPTWTFRGQDSRASDGGRATLLLLDRADDPLSPLMHEF 386          
BLAST of mRNA_Ecto-sp13_S_contig16576.4724.1 vs. uniprot
Match: A0A835YPU4_9STRA (Sec1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPU4_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 1.580e-20
Identity = 47/82 (57.32%), Postives = 61/82 (74.39%), Query Frame = 0
Query:    5 AQRLVTLCATLGEFPHVRFAADGGGRTEGVARTFQANMEELVSNSPTWTFRGQDSRASDGGRATLLLLDRADDPLSPLMHEF 86
            AQRLVTLC+TL EFP+VR++     R E VAR FQ  M   ++ +  W+F GQDS  S+ GR+TLL++DRADDPL+PLMH+F
Sbjct:  189 AQRLVTLCSTLREFPYVRYSGTSP-RAEAVARDFQNKMNMFIAGASDWSFHGQDS-TSERGRSTLLVMDRADDPLTPLMHDF 268          
BLAST of mRNA_Ecto-sp13_S_contig16576.4724.1 vs. uniprot
Match: A0A7S1D716_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D716_CYCTE)

HSP 1 Score: 83.2 bits (204), Expect = 9.760e-17
Identity = 41/85 (48.24%), Postives = 60/85 (70.59%), Query Frame = 0
Query:    2 ASIAQRLVTLCATLGEFPHVRFAADGGGRTEGVARTFQANMEELVSNSPTWTFRGQDSRASDGGRATLLLLDRADDPLSPLMHEF 86
            A +A++L+++C+TL E PH+R+A D     + +A+TF A ME+ V N+ T+ + G D   +D  RATLL+LDR DD LSPLMH+F
Sbjct:  118 AKMAEKLLSVCSTLNELPHIRYAKDSA-TADSLAKTFHAKMEQFVRNNETFWYHG-DPNNNDRERATLLILDRKDDCLSPLMHDF 200          
BLAST of mRNA_Ecto-sp13_S_contig16576.4724.1 vs. uniprot
Match: A0A8J9SSS8_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SSS8_PHATR)

HSP 1 Score: 82.4 bits (202), Expect = 1.630e-16
Identity = 42/85 (49.41%), Postives = 59/85 (69.41%), Query Frame = 0
Query:    4 IAQRLVTLCATLGEFPHVRFAADGGGRTEGVARTFQANMEELVSNSPTWTFRGQD--SRASDGGRATLLLLDRADDPLSPLMHEF 86
            IA++LVT+CATL E+PH+R+    G  T  +A  F   M+E VS +P+W + G    ++A++  R TLLLLDRADD L+PLMH+F
Sbjct:  146 IAEKLVTVCATLNEYPHIRYKQSSGICTS-LASVFHLKMDEYVSQNPSWWYHGGPVKNQAANRERGTLLLLDRADDCLTPLMHDF 229          
BLAST of mRNA_Ecto-sp13_S_contig16576.4724.1 vs. uniprot
Match: A0A448YUW2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YUW2_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 6.420e-16
Identity = 41/85 (48.24%), Postives = 58/85 (68.24%), Query Frame = 0
Query:    5 AQRLVTLCATLGEFPHVRFAADGGGRTEGVARTFQANMEELVSNSPTWTFRGQD---SRASDGGRATLLLLDRADDPLSPLMHEF 86
            AQ+LVTLCATL E+P++R+  +      G+A  F+  M+E V N+P W + G     SR S+  R+TLLLLDR++D L+PLMH+F
Sbjct:  279 AQKLVTLCATLNEYPYIRYKQNSN-ICSGIASIFKMKMDEFVGNNPGWWYHGSGNCPSRNSERDRSTLLLLDRSNDCLTPLMHDF 362          
BLAST of mRNA_Ecto-sp13_S_contig16576.4724.1 vs. uniprot
Match: A0A7R9WGS9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WGS9_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 9.520e-15
Identity = 39/83 (46.99%), Postives = 53/83 (63.86%), Query Frame = 0
Query:    4 IAQRLVTLCATLGEFPHVRFAADGGGRTEGVARTFQANMEELVSNSPTWTFRGQDSRASDGGRATLLLLDRADDPLSPLMHEF 86
            I  +LVTLCATL E+PH+R+ +     T  +A  F   M E +  +  W + G D+  +  GR+TLLL+DR+DD LSPLMHEF
Sbjct:  183 ICDKLVTLCATLNEYPHIRYRSSSPLCTS-LANVFHRKMSEFIGGNQKWWYHG-DANHTSRGRSTLLLVDRSDDCLSPLMHEF 263          
BLAST of mRNA_Ecto-sp13_S_contig16576.4724.1 vs. uniprot
Match: A0A7S2EHV9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EHV9_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.420e-14
Identity = 42/86 (48.84%), Postives = 55/86 (63.95%), Query Frame = 0
Query:    1 MASIAQRLVTLCATLGEFPHVRFAADGGGRTEGVARTFQANMEELVSNSPTWTFRGQDSRASDGGRATLLLLDRADDPLSPLMHEF 86
            M  IA +LVT+CAT+ E+PH+RF +      + +A  F   M E V ++  W + G D+  S   R+TLLLLDRADD LSPLMHEF
Sbjct:  103 MIEIADKLVTVCATMNEYPHIRFRSTSD-LCKTLADIFHNKMNEFVGSNTNWWYYG-DATHSARDRSTLLLLDRADDCLSPLMHEF 186          
BLAST of mRNA_Ecto-sp13_S_contig16576.4724.1 vs. uniprot
Match: A0A7S2L2Q9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L2Q9_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.900e-14
Identity = 40/81 (49.38%), Postives = 51/81 (62.96%), Query Frame = 0
Query:    6 QRLVTLCATLGEFPHVRFAADGGGRTEGVARTFQANMEELVSNSPTWTFRGQDSRASDGGRATLLLLDRADDPLSPLMHEF 86
            Q+LVT+CATL E+PHVR+  D       +A  FQ  M E V ++ +W + G D    +  RATLL +DR DD LSPLMHEF
Sbjct:  132 QKLVTVCATLNEYPHVRYP-DENELCRNLAFVFQQKMNEFVGSNDSWWYNG-DGLHPNSDRATLLFMDRKDDCLSPLMHEF 210          
BLAST of mRNA_Ecto-sp13_S_contig16576.4724.1 vs. uniprot
Match: A0A1Z5K703_FISSO (Syntaxin-binding protein 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K703_FISSO)

HSP 1 Score: 76.6 bits (187), Expect = 1.960e-14
Identity = 37/85 (43.53%), Postives = 52/85 (61.18%), Query Frame = 0
Query:    4 IAQRLVTLCATLGEFPHVRFAADGGGRTEGVARTFQANMEELVSNSPTWTFRGQDSRASDGG--RATLLLLDRADDPLSPLMHEF 86
            IA RLVT+C TL E+PH+R+       +  +A  F   M++ V+ +P W + G   + +     R TLLLLDRADD L+PLMH+F
Sbjct:  192 IADRLVTVCGTLNEYPHIRYK-QSSTMSSSLAHIFHRKMDDFVAQNPNWWYHGGPKKGAGAAKERGTLLLLDRADDALTPLMHDF 275          
BLAST of mRNA_Ecto-sp13_S_contig16576.4724.1 vs. uniprot
Match: A0A2R5GGK0_9STRA (Syntaxin-binding protein 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GGK0_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 3.700e-14
Identity = 37/86 (43.02%), Postives = 57/86 (66.28%), Query Frame = 0
Query:    1 MASIAQRLVTLCATLGEFPHVRFAADGGGRTEGVARTFQANMEELVSNSPTWTFRGQDSRASDGGRATLLLLDRADDPLSPLMHEF 86
            ++S+A+ LVTLCATL E+P VR+ AD     E +A TF    +  ++++  +T+RG  +  +   RATL++LDRA DP +PL+H F
Sbjct:  196 ISSMAENLVTLCATLNEYPFVRYDADSPLSVE-LANTFDQRFKTFINSNSDFTWRGSGANGNQSMRATLIVLDRAADPATPLLHSF 280          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16576.4724.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5U1_9PHAE1.500e-4898.84Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YPU4_9STRA1.580e-2057.32Sec1-like protein n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S1D716_CYCTE9.760e-1748.24Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A8J9SSS8_PHATR1.630e-1649.41Hypothetical protein (Fragment) n=2 Tax=Phaeodacty... [more]
A0A448YUW2_9STRA6.420e-1648.24Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7R9WGS9_9STRA9.520e-1546.99Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7S2EHV9_9STRA1.420e-1448.84Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2L2Q9_9STRA1.900e-1449.38Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A1Z5K703_FISSO1.960e-1443.53Syntaxin-binding protein 1 n=2 Tax=Fistulifera sol... [more]
A0A2R5GGK0_9STRA3.700e-1443.02Syntaxin-binding protein 1 n=1 Tax=Hondaea ferment... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001619Sec1-like proteinPFAMPF00995Sec1coord: 2..86
e-value: 2.3E-11
score: 43.7
IPR001619Sec1-like proteinPANTHERPTHR11679VESICLE PROTEIN SORTING-ASSOCIATEDcoord: 3..86
IPR027482Sec1-like, domain 2GENE3D3.40.50.1910coord: 1..86
e-value: 8.2E-18
score: 66.6
NoneNo IPR availablePANTHERPTHR11679:SF30PROTEIN ROPcoord: 3..86
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..86
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..16
IPR036045Sec1-like superfamilySUPERFAMILY56815Sec1/munc18-like (SM) proteinscoord: 3..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16576contigEcto-sp13_S_contig16576:2506..3877 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16576.4724.1mRNA_Ecto-sp13_S_contig16576.4724.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16576 2497..3877 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16576.4724.1 ID=prot_Ecto-sp13_S_contig16576.4724.1|Name=mRNA_Ecto-sp13_S_contig16576.4724.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=86bp
MASIAQRLVTLCATLGEFPHVRFAADGGGRTEGVARTFQANMEELVSNSP
TWTFRGQDSRASDGGRATLLLLDRADDPLSPLMHEF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001619Sec1-like
IPR027482Sec-1-like_dom2
IPR036045Sec1-like_sf