prot_Ecto-sp13_S_contig16576.4723.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16576.4723.1
Unique Nameprot_Ecto-sp13_S_contig16576.4723.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length163
Homology
BLAST of mRNA_Ecto-sp13_S_contig16576.4723.1 vs. uniprot
Match: A0A6H5L5U1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5U1_9PHAE)

HSP 1 Score: 318 bits (816), Expect = 2.530e-102
Identity = 162/163 (99.39%), Postives = 163/163 (100.00%), Query Frame = 0
Query:    1 MDGGGKGARGAGSDAWRVMVLDARATRVISSVVGMYDIMEGHVTVVEDLHKARQPFREMEGVYLVAPTAESVEAIKRDFSSPADALYSKVHLFFLERVPPDLLQSIKQCPTLVSRLKTFKEINMDFLVPEMQSYHLDMGSLSGAGEVEAAAHFRELYGGRGQA 163
            MDGGGKGARGAGSDAWRVMVLDARATRVISSV+GMYDIMEGHVTVVEDLHKARQPFREMEGVYLVAPTAESVEAIKRDFSSPADALYSKVHLFFLERVPPDLLQSIKQCPTLVSRLKTFKEINMDFLVPEMQSYHLDMGSLSGAGEVEAAAHFRELYGGRGQA
Sbjct:  133 MDGGGKGARGAGSDAWRVMVLDARATRVISSVLGMYDIMEGHVTVVEDLHKARQPFREMEGVYLVAPTAESVEAIKRDFSSPADALYSKVHLFFLERVPPDLLQSIKQCPTLVSRLKTFKEINMDFLVPEMQSYHLDMGSLSGAGEVEAAAHFRELYGGRGQA 295          
BLAST of mRNA_Ecto-sp13_S_contig16576.4723.1 vs. uniprot
Match: A0A835YPU4_9STRA (Sec1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPU4_9STRA)

HSP 1 Score: 152 bits (383), Expect = 4.000e-40
Identity = 73/147 (49.66%), Postives = 109/147 (74.15%), Query Frame = 0
Query:   13 SDAWRVMVLDARATRVISSVVGMYDIMEGHVT-VVEDLHKARQPFREMEGVYLVAPTAESVEAIKRDFSSPADALYSKVHLFFLERVPPDLLQSIKQCPTLVSRLKTFKEINMDFLVPEMQSYHLDMGSLSGAGEVEAAAHFRELYG 158
            ++AWRVM+LD  AT+V+SS+VGMYDI E   + +VED++K RQPF++M+ VY++ P  +SV+ +K DF +  +ALY +VHL+FLE VP  +++SI+ CP L+ R+K+FKEIN+DF++ E+Q++HL MG   G   +     FR LYG
Sbjct:   35 TEAWRVMILDDHATKVVSSIVGMYDITEASASAMVEDINKPRQPFKDMDAVYILDPCDQSVDKLKADFPNKKEALYKRVHLYFLEPVPDVVMESIRGCPELLRRVKSFKEINLDFVLSEVQTFHLGMGVEPGMPSL-----FRTLYG 176          
BLAST of mRNA_Ecto-sp13_S_contig16576.4723.1 vs. uniprot
Match: A0A7S3LMI1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LMI1_9STRA)

HSP 1 Score: 127 bits (320), Expect = 4.420e-34
Identity = 61/121 (50.41%), Postives = 85/121 (70.25%), Query Frame = 0
Query:   18 VMVLDARATRVISSVVGMYDIMEGHVTVVEDLHKARQPFREMEGVYLVAPTAESVEAIKRDFSSPADALYSKVHLFFLERVPPDLLQSIKQCPTLVSRLKTFKEINMDFLVPEMQSYHLDM 138
            V+VLD RATR+++SV+ MYDI     +V E L K R+PF ++E +Y++ PT +S+E I  DF+S   ALYS VHLFF+ +   ++L +IKQC  LV R+KT  EIN+DFL  E  ++HLDM
Sbjct:   21 VLVLDHRATRILNSVLRMYDITSEGCSVAEPLEKNRRPFPDLEAIYIIDPTPKSIERICDDFASKGKALYSAVHLFFISKAGKEILDTIKQCKVLVQRIKTLVEINLDFLAVETNTFHLDM 141          
BLAST of mRNA_Ecto-sp13_S_contig16576.4723.1 vs. uniprot
Match: W7TX74_9STRA (Sec1-like family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TX74_9STRA)

HSP 1 Score: 131 bits (330), Expect = 1.150e-32
Identity = 65/126 (51.59%), Postives = 86/126 (68.25%), Query Frame = 0
Query:   13 SDAWRVMVLDARATRVISSVVGMYDIMEGHVTVVEDLHKARQPFREMEGVYLVAPTAESVEAIKRDFSSPADALYSKVHLFFLERVPPDLLQSIKQCPTLVSRLKTFKEINMDFLVPEMQSYHLDM 138
            S  W VMV+D  A RV+S++VGMYD+ME  VT++E L K RQP  EM+ +YLV PT +SV  I +DF++P    Y  VHLFFL +V   L+Q +   P  + R++TFKEINM+FL  E  S+HLDM
Sbjct:   37 SRGWMVMVIDDAALRVVSALVGMYDVMEHRVTLIELLSKDRQPLPEMDVIYLVTPTPDSVNLILKDFANPKKPRYGAVHLFFLSKVNDMLMQRLAAVPNFLQRVRTFKEINMNFLATEAFSFHLDM 162          
BLAST of mRNA_Ecto-sp13_S_contig16576.4723.1 vs. uniprot
Match: A0A7S3M4C1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M4C1_9STRA)

HSP 1 Score: 130 bits (328), Expect = 2.250e-32
Identity = 63/122 (51.64%), Postives = 85/122 (69.67%), Query Frame = 0
Query:   16 WRVMVLDARATRVISSVVGMYDIMEGHVTVVEDLHKARQPFREMEGVYLVAPTAESVEAIKRDFSSPADALYSKVHLFFLERVPPDLLQSIKQCPTLVSRLKTFKEINMDFLVPEMQSYHLD 137
            W+V+V+D  ATRVIS+ + MYDIME  VT+VE L K RQPF +M+ +YL APT ESV  I  DF S A A Y  VH+FF++  P ++  +I+Q   LVS++KTFKEI++DF+  E   +H D
Sbjct:   35 WKVLVMDEHATRVISAALTMYDIMERRVTLVEQLAKNRQPFPDMDVIYLAAPTLESVRRISSDFESRAKAKYGNVHIFFIDTAPNEVFSAIQQNALLVSKVKTFKEISLDFIAAENNVFHFD 156          
BLAST of mRNA_Ecto-sp13_S_contig16576.4723.1 vs. uniprot
Match: A0A7S2GLQ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GLQ5_9STRA)

HSP 1 Score: 119 bits (299), Expect = 2.510e-31
Identity = 66/137 (48.18%), Postives = 84/137 (61.31%), Query Frame = 0
Query:   23 ARATRVISSVVGMYDIMEGHVTVVEDLHKARQPFREMEGVYLVAPTAESVEAIKRDFSSPADALYSKVHLFFLERVPPDLLQSIKQCPTLVSRLKTFKEINMDFLVPEMQSYHLDMGSLSGAGEVEAAAHFRELYGG 159
            A ATRVISSV+ M+DIME  +T+VE L K RQPF EM  VY+++P   S+  + RDFS      Y  VHLFFL RV  D +  +K+CP L++R+KTFKEIN+D+L  E Q +  D               F ELYGG
Sbjct:    1 APATRVISSVLTMFDIMEERITLVESLEKNRQPFPEMTVVYIISPQLNSINQVVRDFSKSPK--YGDVHLFFLSRVGDDGIAELKRCPALIARIKTFKEINIDYLAVETQVFSFDERC------------FAELYGG 123          
BLAST of mRNA_Ecto-sp13_S_contig16576.4723.1 vs. uniprot
Match: A0A7S1XSV6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSV6_9STRA)

HSP 1 Score: 127 bits (319), Expect = 4.730e-31
Identity = 60/140 (42.86%), Postives = 92/140 (65.71%), Query Frame = 0
Query:   16 WRVMVLDARATRVISSVVGMYDIMEGHVTVVEDLHKARQPFREMEGVYLVAPTAESVEAIKRDFSSPADALYSKVHLFFLERVPPDLLQSIKQCPTLVSRLKTFKEINMDFLVPEMQSYHLDM----GSLSGAGEVEAAA 151
            W+V++LD  AT+VISSV+   D+M+  ++++E L   RQPF++ME +Y++APT ESV  + +DF +  DALY   HL FL  VP ++ + IK+   LV R+ TFKE+N+D + PE   +H  M      L G G+++AA+
Sbjct:   93 WKVLILDEPATKVISSVMRASDLMDSRISLIERLSLRRQPFKDMEAIYVIAPTLESVRRVCQDFRTERDALYGAAHLLFLSEVPEEVFEEIKEAEVLVQRVMTFKELNVDVVAPESGLFHFGMLQSYADLYGEGDLDAAS 232          
BLAST of mRNA_Ecto-sp13_S_contig16576.4723.1 vs. uniprot
Match: A0A7S2SSJ4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSJ4_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.140e-28
Identity = 63/125 (50.40%), Postives = 83/125 (66.40%), Query Frame = 0
Query:   13 SDAWRVMVLDARATRVISSVVGMYDIMEGHVTVVEDLHKARQPFREMEGVYLVAPTAESVEAIKRDFSSPADALYSKVHLFFLERVPPDLLQSIKQCPTLVSRLKTFKEINMDFLVPEMQSYHLD 137
            +++W V VLDARATRV+SS V M+DIME  VT+VE L KARQ F EME VY++ P+  SV  +  DFS  A A Y  VHL FL ++       ++ C  L++R+K+ KEIN+DFL  E   +HLD
Sbjct:   36 TESWLVAVLDARATRVVSSFVTMFDIMEQRVTLVESLEKARQSFPEMEVVYIIEPSEGSVTRLVEDFSK-AKAPYGDVHLLFLSKLSDARFAQLRSCEALIARVKSLKEINVDFLALESSVFHLD 159          
BLAST of mRNA_Ecto-sp13_S_contig16576.4723.1 vs. uniprot
Match: A0A7S4AKE7_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AKE7_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.940e-28
Identity = 54/124 (43.55%), Postives = 85/124 (68.55%), Query Frame = 0
Query:   16 WRVMVLDARATRVISSVVGMYDIMEGHVTVVEDLHKARQPFREMEGVYLVAPTAESVEAIKRDFSSPADALYSK-VHLFFLERVPPDLLQSIKQCPTLVSRLKTFKEINMDFLVPEMQSYHLDM 138
            W+V+++D  A +V+S+ VGMYDIME  V++VE L K R PF++M  +Y+++PT +S++ +  D+S     LY   V L+FL  V  +++Q +KQC  L+ RLK   EIN+DFL+ E +++ LDM
Sbjct:  142 WKVLIVDEPAMKVVSAAVGMYDIMEQQVSIVESLEKVRAPFKDMAAIYILSPTQDSIKRLLDDYSDKTTVLYGNAVFLYFLGSVSQEMMQQLKQCKQLIKRLKAMAEINVDFLIQEQRAFILDM 265          
BLAST of mRNA_Ecto-sp13_S_contig16576.4723.1 vs. uniprot
Match: A0A1E7FLM4_9STRA (Sec1-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FLM4_9STRA)

HSP 1 Score: 119 bits (297), Expect = 4.860e-28
Identity = 57/124 (45.97%), Postives = 83/124 (66.94%), Query Frame = 0
Query:   16 WRVMVLDARATRVISSVVGMYDIMEGHVTVVEDLHKARQPFREMEGVYLVAPTAESVEAIKRDFSSPADALYSK-VHLFFLERVPPDLLQSIKQCPTLVSRLKTFKEINMDFLVPEMQSYHLDM 138
            W+V+++D    +VIS+ VGMYDIME  V++VE L + R PF++M  +Y++APT ESV+ +  D++     LY   V L+FL  +P  L+  IKQC  LV RLK   E+N+DFL+ E +S+ LDM
Sbjct:  126 WKVLIVDEPGMKVISAAVGMYDIMEQQVSIVESLERKRAPFKDMAAIYILAPTNESVQKLLDDYADKTKILYGPAVFLYFLGPIPKQLMHQIKQCKQLVKRLKAVAEVNVDFLMREQRSFVLDM 249          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16576.4723.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5U1_9PHAE2.530e-10299.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YPU4_9STRA4.000e-4049.66Sec1-like protein n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S3LMI1_9STRA4.420e-3450.41Hypothetical protein (Fragment) n=1 Tax=Aplanochyt... [more]
W7TX74_9STRA1.150e-3251.59Sec1-like family protein n=2 Tax=Monodopsidaceae T... [more]
A0A7S3M4C1_9STRA2.250e-3251.64Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2GLQ5_9STRA2.510e-3148.18Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S1XSV6_9STRA4.730e-3142.86Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S2SSJ4_9STRA1.140e-2850.40Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4AKE7_9STRA1.940e-2843.55Hypothetical protein n=2 Tax=Pseudo-nitzschia aust... [more]
A0A1E7FLM4_9STRA4.860e-2845.97Sec1-like protein n=1 Tax=Fragilariopsis cylindrus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.2060coord: 7..121
e-value: 1.4E-34
score: 120.5
NoneNo IPR availablePANTHERPTHR11679:SF30PROTEIN ROPcoord: 16..157
IPR001619Sec1-like proteinPFAMPF00995Sec1coord: 17..137
e-value: 2.8E-22
score: 79.7
IPR001619Sec1-like proteinPANTHERPTHR11679VESICLE PROTEIN SORTING-ASSOCIATEDcoord: 16..157
IPR036045Sec1-like superfamilySUPERFAMILY56815Sec1/munc18-like (SM) proteinscoord: 13..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16576contigEcto-sp13_S_contig16576:1235..2158 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16576.4723.1mRNA_Ecto-sp13_S_contig16576.4723.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16576 1235..2158 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16576.4723.1 ID=prot_Ecto-sp13_S_contig16576.4723.1|Name=mRNA_Ecto-sp13_S_contig16576.4723.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=163bp
MDGGGKGARGAGSDAWRVMVLDARATRVISSVVGMYDIMEGHVTVVEDLH
KARQPFREMEGVYLVAPTAESVEAIKRDFSSPADALYSKVHLFFLERVPP
DLLQSIKQCPTLVSRLKTFKEINMDFLVPEMQSYHLDMGSLSGAGEVEAA
AHFRELYGGRGQA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001619Sec1-like
IPR036045Sec1-like_sf