prot_Ecto-sp13_S_contig16495.4678.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16495.4678.1
Unique Nameprot_Ecto-sp13_S_contig16495.4678.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length379
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16495.4678.1 vs. uniprot
Match: D8LQP5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQP5_ECTSI)

HSP 1 Score: 447 bits (1151), Expect = 9.620e-155
Identity = 277/326 (84.97%), Postives = 283/326 (86.81%), Query Frame = 0 
Query:   53 GNKLHTVMSVRAEDERTMALLRKECDQLMVTSMEAKLKEKQAMTLVSGLQADIEALQAQVGVLQSALWLEKERASAAVRASRGATGPPTRGVTSKAALTMLSSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGRSEKRRNGIPLKRIGERGGRGRPATSPAQDTQALRGKLPRGNAGGLFGRKKPWGGGAGGNCSDQHLDGSRGFPASERGGGAGIPDGTTATDGSFTDAWASNDYFHGXXXXXXEKSPQGHQQERSIEQFVLDLDGRRGYGGXXXXXXXXPIGEVESGGGGQTTITPFQRWKRERGIVSLGVAEMFGEQGCCS 378
            GNKLHTVMSVRAEDERTMALLRKECDQ MVTSMEAK+KEKQAMTLVSGLQADIEALQ QVGVLQSALWLEKERASAAVRASRGA GP TRG  SKAALTM  SA XXXXXXXXXXXXXXXXXXXXXXXXXXXX G S KRRNGIPLKRIGERGGR RPAT+PA+DTQALRGKLP GNAG L+GR KP GGG GGNCS QHL G  GF ASE+GGGAG PDGTTATDGSFTDAWASNDYFHG      EKSPQG+QQERSIEQFVLDLDGRRGY G          GEVESGGGGQTTITPFQRWKRERGIVS GVAEMFG QGCCS
Sbjct:    9 GNKLHTVMSVRAEDERTMALLRKECDQSMVTSMEAKIKEKQAMTLVSGLQADIEALQTQVGVLQSALWLEKERASAAVRASRGAIGPSTRGGVSKAALTMTGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGPSGKRRNGIPLKRIGERGGRRRPATAPAKDTQALRGKLPHGNAGDLYGRNKPRGGGVGGNCSSQHLGGGLGFLASEQGGGAGSPDGTTATDGSFTDAWASNDYFHGAGAGAGEKSPQGYQQERSIEQFVLDLDGRRGYAGGGGSGTG---GEVESGGGGQTTITPFQRWKRERGIVSPGVAEMFGGQGCCS 331
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16495.4678.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQP5_ECTSI9.620e-15584.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16495contigEcto-sp13_S_contig16495:358..3163 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16495.4678.1mRNA_Ecto-sp13_S_contig16495.4678.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16495 278..3163 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16495.4678.1 ID=prot_Ecto-sp13_S_contig16495.4678.1|Name=mRNA_Ecto-sp13_S_contig16495.4678.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=379bp
MDQSFKLSDGYRNWAAFVEEFRRIEESLQESKRLERVLVAQCNQLKSELV
ASGNKLHTVMSVRAEDERTMALLRKECDQLMVTSMEAKLKEKQAMTLVSG
LQADIEALQAQVGVLQSALWLEKERASAAVRASRGATGPPTRGVTSKAAL
TMLSSASTASAAAAEATAVASAVLANSSSRGGGGGCGRSEKRRNGIPLKR
IGERGGRGRPATSPAQDTQALRGKLPRGNAGGLFGRKKPWGGGAGGNCSD
QHLDGSRGFPASERGGGAGIPDGTTATDGSFTDAWASNDYFHGGGGGGGE
KSPQGHQQERSIEQFVLDLDGRRGYGGGDGGGGGGPIGEVESGGGGQTTI
TPFQRWKRERGIVSLGVAEMFGEQGCCS*
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