prot_Ecto-sp13_S_contig16463.4659.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16463.4659.1
Unique Nameprot_Ecto-sp13_S_contig16463.4659.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length305
Homology
BLAST of mRNA_Ecto-sp13_S_contig16463.4659.1 vs. uniprot
Match: D8LJJ2_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJJ2_ECTSI)

HSP 1 Score: 561 bits (1445), Expect = 7.970e-196
Identity = 295/305 (96.72%), Postives = 298/305 (97.70%), Query Frame = 0
Query:    1 MMGPTTFREQLRTIFGLRLTRAEVGGLISAFDLHRDGMVDAKEFAFRFHTLARDSHAAKVAEGQARNETARRRKREQEEALLAKLREQSKCKVNWNFSEDELKRGLKMIAVAASTYDKARLGADINRIAQMKMDPTAFRAQLLMNFRVRLGPGELGAVFTAFDKDNSKLIDGTELMHEFFRMGREERAKNLAEAERQRHRADTKEKNFRRSLEDRFIEQTAAKVVWPRLMYDPFDDDYNMDDHDPATSVGSTSLSKSVGDNKSRGSSNKYNNNEPGDVSREPSARRRRRPKISASTAEFLAQIRK 305
            MMGPTTFREQLRTIFGLRLTRAEVGGLISAFDLHRDGMVDAKEFAFRFHTLARDSHAAKVAEGQARNETARRR REQEEALL KLREQSKCKVNW+FSEDELKRGLKMIAVAASTYDKARLGADINRIAQMKMDPTAFRAQLLMNFRVRLGPGELGAVFTAFDKDNSKLIDGTELMHEFFRMGREERAKNLAEAERQRHRAD KEKNFR+ LEDRFIEQTAAKVVWPRLMYDPFDDDYNMDDHDPATSVGST+LSKSVGDNKSRG SN  NNNEPGDVSREPSARRRRRPKISASTAEFLAQIRK
Sbjct:  153 MMGPTTFREQLRTIFGLRLTRAEVGGLISAFDLHRDGMVDAKEFAFRFHTLARDSHAAKVAEGQARNETARRRNREQEEALLTKLREQSKCKVNWSFSEDELKRGLKMIAVAASTYDKARLGADINRIAQMKMDPTAFRAQLLMNFRVRLGPGELGAVFTAFDKDNSKLIDGTELMHEFFRMGREERAKNLAEAERQRHRADLKEKNFRQRLEDRFIEQTAAKVVWPRLMYDPFDDDYNMDDHDPATSVGSTTLSKSVGDNKSRGRSNNDNNNEPGDVSREPSARRRRRPKISASTAEFLAQIRK 457          
BLAST of mRNA_Ecto-sp13_S_contig16463.4659.1 vs. uniprot
Match: A0A6H5KBB4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBB4_9PHAE)

HSP 1 Score: 307 bits (786), Expect = 9.610e-100
Identity = 168/192 (87.50%), Postives = 169/192 (88.02%), Query Frame = 0
Query:  131 MKMDPTAFRAQLLMNFRVRLGPGELGAVFTAFDKDNSKLIDGTE-----------------LMHEFFRMGREERAKNLAEAERQRHRADTKEKNFRRSLEDRFIEQTAAKVVWPRLMYDPFDDDYNMDDHDPATSVGSTSLSKSVGDNKSRGSSNKYNNNEPGDVSREPSARRRRRPKISASTAEFLAQIRK 305
            MKMDPTAFRAQLLMNFRVRLGPGELGAVFTAFDKDNSKLIDGTE                 LMHEFFRMGREERAKNLAEAERQRHRADTKEKNFRR LEDRFIEQTAAKV WPRLMYDPFD+DYNMDDHDPATSV STSLSKSVGDNKSRGSSN  NNNE GDVSREPSARRRRRPKISASTAEFLAQIRK
Sbjct:    1 MKMDPTAFRAQLLMNFRVRLGPGELGAVFTAFDKDNSKLIDGTETFTLAADTYTREHARTKLMHEFFRMGREERAKNLAEAERQRHRADTKEKNFRRRLEDRFIEQTAAKVEWPRLMYDPFDEDYNMDDHDPATSVRSTSLSKSVGDNKSRGSSNNDNNNETGDVSREPSARRRRRPKISASTAEFLAQIRK 192          
BLAST of mRNA_Ecto-sp13_S_contig16463.4659.1 vs. uniprot
Match: A0A835YPN5_9STRA (EF-hand domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPN5_9STRA)

HSP 1 Score: 144 bits (364), Expect = 5.050e-35
Identity = 83/233 (35.62%), Postives = 125/233 (53.65%), Query Frame = 0
Query:    2 MGPTTFREQLRTIFGLRLTRAEVGGLISAFDLHRDGMVDAKEFAFRFHTLARDSHAAKVAEGQARNETARRRKREQEEALLAKLREQSKCKVNWNFSEDELKRGLKMIAVAASTYDKARLGADINRIAQMKMDPTAFRAQLLMNFRVRLGPGELGAVFTAFDKDNSKLIDGTELMHEFFRMGREERAKNLAEAERQRHRADTKEKNFRRSLEDRFIEQTAAKVVWPRLMYDPF 234
            M  T FREQL+  FGL+L+  E+G L+  F       +D  +F   F  L R    A++   + ++E  R      ++ ++++L      +VNW+ S+      L  +A  A+ YD+ R    +  +    MD T F  QL   F +RL   ELGA+F  FD D    +DG E ++ FF++GREERAK LAEAER R R + K + F  SL+ R + ++ AKV WP + +DP+
Sbjct:  261 MSATVFREQLKMRFGLKLSPGELGALMQEFGREGGKSIDGAQFMGHFTQLGRHERYAQLQRQRRQDEALRXXXXRHQDEVVSRLGALVAARVNWSPSDAARATALNKVAKEAAHYDRDR-SIGLQNMLSGSMDVTGFNTQLRQGFGIRLSSAELGALFKVFDLDGGGTVDGAEFLNAFFKLGREERAKQLAEAERTRQRMEDKRRRFNESLQTRLVLRSTAKVEWPIMEFDPY 492          
BLAST of mRNA_Ecto-sp13_S_contig16463.4659.1 vs. uniprot
Match: A0A6H5JI75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI75_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 2.450e-19
Identity = 67/183 (36.61%), Postives = 91/183 (49.73%), Query Frame = 0
Query:    2 MGPTTFREQLRTIFGLRLTRAEVGGLISAFDLHRDGMVDAKEFAFRFHTLARDSHAAKVAEGQARNETARRRKREQEEALLAKLREQSKCKVNWNFSEDELKRGLKMIAVAASTYDKARLGA-DINRIAQMKMDPTAFRAQLLMNFRVRLGPGELGAVFTAFDKDNSKLIDGTELMHEFFRMG 183
            M P  FREQLR +F ++LT AE+GG++  FD   DG VD  EF   F  +  D    +         T ++R+ E EE   A        K+N ++SE   +  +  I  AA+ YDK    A  ++     +M+P  FR QL   F +RL P ELGA   AFDKD    I   E +  FFR+G
Sbjct:  415 MPPHVFREQLRKVFNIKLTPAELGGVMHRFDKDDDGTVDVVEFTKMFFKMGFDERNRR---------TKKKREAEAEERKNA-------LKINRSYSERHYQSAMAKITKAAARYDKNHPSAVSLDAFDGAQMEPHVFREQLKRAFGIRLTPPELGAAIHAFDKDGDGSISCPEFLRTFFRLG 581          
BLAST of mRNA_Ecto-sp13_S_contig16463.4659.1 vs. uniprot
Match: D8LDZ3_ECTSI (Hypothetical leucine rich repeat calcium binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ3_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 3.250e-16
Identity = 60/183 (32.79%), Postives = 84/183 (45.90%), Query Frame = 0
Query:    2 MGPTTFREQLRTIFGLRLTRAEVGGLISAFDLHRDGMVDAKEFAFRFHTLARDSHAAKVAEGQARNETARRRKREQEEALLAKLREQSKCKVNWNFSEDELKRGLKMIAVAASTYDKARLGA-DINRIAQMKMDPTAFRAQLLMNFRVRLGPGELGAVFTAFDKDNSKLIDGTELMHEFFRMG 183
            M P  FREQLR +F ++LT AE+GG++  FD   DG VD  EF   F  +  D    +                            ++  K+N ++SE   +  +  I  AA+ YDK    A  ++     +M+P  FR QL   F ++L P ELGA   AFDKD    I   E +  FFR+G
Sbjct:  107 MPPHVFREQLRKVFNIKLTPAELGGVMHRFDKDDDGTVDVVEFTKMFFKMGFDERNRRTKXXXXXXXXXXXXXXXXXXXXXXXXXRKNALKINRSYSERHYQSAMAKITKAAARYDKNHPSAVSLDAFDGAQMEPHVFREQLKRAFGIQLTPPELGAAIHAFDKDGDGSISCPEFLRTFFRLG 289          
BLAST of mRNA_Ecto-sp13_S_contig16463.4659.1 vs. uniprot
Match: A0A835Z644_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z644_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 2.950e-14
Identity = 62/186 (33.33%), Postives = 93/186 (50.00%), Query Frame = 0
Query:    2 MGPTTFREQLRTIFGLRLTRAEVGGLISAFDLHRDGMVDAKEFAFRFHTLARDSHAAKVAEGQARNETARRRKREQEEALL---AKLREQSKCKVNWNFSEDELKRGLKMIAVAASTYDKARLG-ADINRIAQMKMDPTAFRAQLLMNFRVRLGPGELGAVFTAFDKDNSKLIDGTELMHEFFRMG 183
            M P  F+EQL+ +F + LTR E+G L+  FD   DG VD  EF   F    +   AA+ A  + R   AR R            A+   +S   V  +F+E +L+  L +I  AAS YD+  LG   +      +M P   + QL  +F++R  P +LGA+   FD D S  ++  E ++ FF++G
Sbjct:  606 MAPHVFKEQLKRVFNIVLTRPELGALMRHFDKDGDGSVDCAEFLLSFF---KTGFAARNAALERRRRAARARXXXXXXXXXXXXAEYEARSAAAVA-SFTERDLEEALDLILKAASRYDRQALGPGGLEGWCLYRMTPYQLKDQLHRSFQIRPTPPQLGAIMAMFDLDRSGTVEIPEFLNAFFKIG 787          
BLAST of mRNA_Ecto-sp13_S_contig16463.4659.1 vs. uniprot
Match: A0A482SEP7_9ARCH (EF-hand domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SEP7_9ARCH)

HSP 1 Score: 80.5 bits (197), Expect = 4.380e-13
Identity = 57/215 (26.51%), Postives = 106/215 (49.30%), Query Frame = 0
Query:    1 MMGPTTFREQLRTIFGLRLTRAEVGGLISAFDLHRDGMVDAKEFAFRFHTLARDSHAAKVAEGQARNETARRRKREQEEALLAKLREQSKCKVNWNFSEDELKRGLKMIAVAASTYDKARLGADINRIAQMKMDPTAFRAQLLMNFRVRLGPGELGAVFTAFDKDNS-KLIDGTELMHEFFRMGREERAKNLAEA-ERQRHRADTKEKNFRRSLE 213
            +M P  FRE +++IFG++ T  E+G L+S +D  + G +  K+F  +F    +     K  E   + + A +  +++ E  + +L E+S  +V+ +F+ ++     K + V +  YDK    A         + P +FR  +   F + L P E+GA+   F  +N+  + DG + +  F R+G + R+K   E  + QR  A+  +K     L+
Sbjct:   39 LMPPGVFRENIKSIFGVKATPKEIGYLMSVYDKDQCGSIHTKDFLIKFFAQGKTIRDDKRKESLIKQQEALKLAKQEAELKVLQLTEKSDYQVDQHFTLEDFYEAEKRMLVESEKYDKTHPSAPNLDGFNGPISPGSFRELMKRAFNIYLNPREVGAILQRFHAENNINIFDGKKFIIYFIRLGYDVRSKRKREVLKEQRETAEQMKKEXXXKLQ 253          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16463.4659.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LJJ2_ECTSI7.970e-19696.72EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KBB4_9PHAE9.610e-10087.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YPN5_9STRA5.050e-3535.62EF-hand domain-containing protein n=2 Tax=Tribonem... [more]
A0A6H5JI75_9PHAE2.450e-1936.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDZ3_ECTSI3.250e-1632.79Hypothetical leucine rich repeat calcium binding p... [more]
A0A835Z644_9STRA2.950e-1433.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A482SEP7_9ARCH4.380e-1326.51EF-hand domain-containing protein (Fragment) n=1 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 184..204
NoneNo IPR availableCOILSCoilCoilcoord: 60..87
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 3..48
e-value: 1.9E-4
score: 21.2
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 163..175
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 12..203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16463contigEcto-sp13_S_contig16463:561..3636 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16463.4659.1mRNA_Ecto-sp13_S_contig16463.4659.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16463 561..3639 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16463.4659.1 ID=prot_Ecto-sp13_S_contig16463.4659.1|Name=mRNA_Ecto-sp13_S_contig16463.4659.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=305bp
MMGPTTFREQLRTIFGLRLTRAEVGGLISAFDLHRDGMVDAKEFAFRFHT
LARDSHAAKVAEGQARNETARRRKREQEEALLAKLREQSKCKVNWNFSED
ELKRGLKMIAVAASTYDKARLGADINRIAQMKMDPTAFRAQLLMNFRVRL
GPGELGAVFTAFDKDNSKLIDGTELMHEFFRMGREERAKNLAEAERQRHR
ADTKEKNFRRSLEDRFIEQTAAKVVWPRLMYDPFDDDYNMDDHDPATSVG
STSLSKSVGDNKSRGSSNKYNNNEPGDVSREPSARRRRRPKISASTAEFL
AQIRK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair