prot_Ecto-sp13_S_contig16429.4637.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16429.4637.1
Unique Nameprot_Ecto-sp13_S_contig16429.4637.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length255
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16429.4637.1 vs. uniprot
Match: A0A6H5L5H5_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H5_9PHAE)

HSP 1 Score: 301 bits (772), Expect = 9.900e-98
Identity = 201/249 (80.72%), Postives = 207/249 (83.13%), Query Frame = 0 
Query:    4 ERRTTALASYLREESVRVEGGTGARTLSAGPGTSRIRRARDRPEGVGKEGDDDNGTEEKRAGNDAPRRSRYRQSGDXXXXXXXXXXXXXXXXXXXXXXGGMPSDSGEEDSLTMPGLGGVIVTQLTWGAGSGAWDAALKDAAGXXXXXXXXXXXXXXXXXXXASTAIETDRAGLVGTTSVAPPGNADVHGDDDLGTLATPPAEEDWDSSDAERRGGLERGAVETLDQLGEDEAERHRGDGSTRRSTFTEV 252
            ERRTTALASYLREESVRVEGGTGART  AGP TSRIRRA DRPE VGKEGDDDNGT EKRAG+DAPRR RYRQSGDXXXXXX                G +PSDSGEEDSLTMPGLGGVIVTQLTWGAGSGAWDAALKD   XXXXXXXXXXXXXXXXXXX  TAIETDR    GTTSVA PGNADVHGDDDLGT ATP  +EDW SSDAERRGG ERG V+TLDQ GE+EAE HRGDG+TRRSTFTEV
Sbjct:  211 ERRTTALASYLREESVRVEGGTGARTPIAGPDTSRIRRASDRPEEVGKEGDDDNGTNEKRAGDDAPRRLRYRQSGDXXXXXXQ---------------GEVPSDSGEEDSLTMPGLGGVIVTQLTWGAGSGAWDAALKDXXXXXXXXXXXXXXXXXXXXXXXXTAIETDR----GTTSVALPGNADVHGDDDLGTPATPLVDEDWGSSDAERRGGSERGTVQTLDQSGEEEAEGHRGDGNTRRSTFTEV 440
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16429.4637.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L5H5_9PHAE9.900e-9880.72Cyclic nucleotide-binding domain-containing protei... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16429contigEcto-sp13_S_contig16429:2618..3382 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16429.4637.1mRNA_Ecto-sp13_S_contig16429.4637.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16429 2618..3382 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16429.4637.1 ID=prot_Ecto-sp13_S_contig16429.4637.1|Name=mRNA_Ecto-sp13_S_contig16429.4637.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=255bp
MLHERRTTALASYLREESVRVEGGTGARTLSAGPGTSRIRRARDRPEGVG
KEGDDDNGTEEKRAGNDAPRRSRYRQSGDGGGGGGQGEASATQQQQEEQG
QGGMPSDSGEEDSLTMPGLGGVIVTQLTWGAGSGAWDAALKDAAGDAAAE
GTGAATAAEAAVGAASTAIETDRAGLVGTTSVAPPGNADVHGDDDLGTLA
TPPAEEDWDSSDAERRGGLERGAVETLDQLGEDEAERHRGDGSTRRSTFT
EVCT*
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