prot_Ecto-sp13_S_contig16415.4629.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16415.4629.1
Unique Nameprot_Ecto-sp13_S_contig16415.4629.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length113
Homology
BLAST of mRNA_Ecto-sp13_S_contig16415.4629.1 vs. uniprot
Match: D7FJ93_ECTSI (Signal recognition particle subunit SRP72 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ93_ECTSI)

HSP 1 Score: 178 bits (451), Expect = 2.830e-50
Identity = 103/107 (96.26%), Postives = 104/107 (97.20%), Query Frame = 0
Query:    1 LVDKASQKAERRQKKRNPEAILKKRAXXXXXXIAKLVEDGKIDPTKPVPKPDPERWIPRSHRAYGKRGRKRNKFVGAQGSGDGAAKDTAKLDALARAQAKQAASEKV 107
            LVDKASQKAERRQ KR+PEAILKKRAXXXXX IAKLVEDGKIDPTKPVPKPDPERWIPRSHRAYGKRGRKRNKFVGAQGSGDGAAKDTAKLDALARAQAKQAASEK 
Sbjct:  571 LVDKASQKAERRQNKRDPEAILKKRAXXXXXYIAKLVEDGKIDPTKPVPKPDPERWIPRSHRAYGKRGRKRNKFVGAQGSGDGAAKDTAKLDALARAQAKQAASEKA 677          
BLAST of mRNA_Ecto-sp13_S_contig16415.4629.1 vs. uniprot
Match: A0A835YI58_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI58_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.820e-20
Identity = 53/95 (55.79%), Postives = 64/95 (67.37%), Query Frame = 0
Query:    2 VDKASQKAERRQKKRNPEAILKKRAXXXXXXIAKLVEDGKIDPTKPVPKPDPERWIPRSHRAYGKRGRKRNKFVGAQGSGDGAAKDTAKLDALAR 96
            V K + KAER+ +  N     K+RA      +A L+  GK+DPTKP   PDPERWIPR  R+Y KRGRKRNK +GAQG+GDGA K+ AKLD  AR
Sbjct:  593 VGKDALKAERKARSGNTARRAKRRARAREAHVAALIARGKLDPTKPALLPDPERWIPRKQRSYAKRGRKRNKLLGAQGAGDGAKKEEAKLDVAAR 687          
BLAST of mRNA_Ecto-sp13_S_contig16415.4629.1 vs. uniprot
Match: A0A7R9UBM0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBM0_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 4.760e-19
Identity = 46/86 (53.49%), Postives = 60/86 (69.77%), Query Frame = 0
Query:   11 RRQKKRNPEAILKKRAXXXXXXIAKLVEDGKIDPTKPVPKPDPERWIPRSHRAYGKRGRKRNKFVGAQGSGDGAAKDTAKLDALAR 96
            +R+  + PE I+ +R       + KL  +GKI   +P PKPDPERW+PR  R+Y KRG++RN+F+GAQGSGDGA KD AKLD  AR
Sbjct:   86 KRRAAKRPERIMLRRTKLREQYLQKLAAEGKIHADRP-PKPDPERWLPRKQRSYNKRGKRRNQFLGAQGSGDGAQKDAAKLDVAAR 170          
BLAST of mRNA_Ecto-sp13_S_contig16415.4629.1 vs. uniprot
Match: A0A7S2V151_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V151_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 2.290e-18
Identity = 47/84 (55.95%), Postives = 60/84 (71.43%), Query Frame = 0
Query:   19 EAILKKRAXXXXXXIAKLVEDGKIDPTKPVPKPDPERWIPRSHRAYGKRGRK-RNKFVGAQGSGDGAAKDTAKLDALARAQAKQ 101
            E IL++RA      I KL   G+ DP KP   PDPERW+PR  R+Y +RGR+ R++F GAQG+G+G AKD AKLDA AR+QAK+
Sbjct:   14 EKILRRRAKAKAKFIEKLTAAGRYDPRKPT-FPDPERWVPRKQRSYNRRGRRGRHRFTGAQGAGEGTAKDAAKLDAYARSQAKK 96          
BLAST of mRNA_Ecto-sp13_S_contig16415.4629.1 vs. uniprot
Match: A0A7S4W6J8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W6J8_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 8.370e-18
Identity = 49/87 (56.32%), Postives = 62/87 (71.26%), Query Frame = 0
Query:   14 KKRNPEAILKKRAXXXXXXIAKLVEDGKIDPTKPVPKPDPERWIPRSHRAYGKRGRK-RNKFVGAQGSGDGAAKD--TAKLDALARA 97
            KK+N EAIL++RA      + KL  +G+ +P +P  KPDPERWIP++ R+Y +RGR+ RNKFVGAQG G GA  D   AKLDA ARA
Sbjct:   41 KKKNREAILRQRAKKREQYLKKLESEGRYNPDRPA-KPDPERWIPKNQRSYNRRGRRGRNKFVGAQGGGTGAGADREAAKLDAAARA 126          
BLAST of mRNA_Ecto-sp13_S_contig16415.4629.1 vs. uniprot
Match: A0A812S6I0_SYMMI (SRP72 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812S6I0_SYMMI)

HSP 1 Score: 86.3 bits (212), Expect = 2.190e-17
Identity = 49/78 (62.82%), Postives = 55/78 (70.51%), Query Frame = 0
Query:   23 KKRAXXXXXXIAKLVEDGKIDPTKPVPKPDPERWIPRSHRAYGKRGRK-RNKFVGAQGSGDGAAKDTAKLDALARAQA 99
            +KRA      + KL EDGK DP +P  KPDPERW+P  HR+Y KRGRK R+KFVG QGSGDGA KD  KLD  AR QA
Sbjct:  426 RKRAKRREAYLQKLQEDGKYDPARPS-KPDPERWLPLKHRSYNKRGRKNRHKFVGGQGSGDGAQKDMQKLDVYARTQA 502          
BLAST of mRNA_Ecto-sp13_S_contig16415.4629.1 vs. uniprot
Match: A0A7S1ZPJ3_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZPJ3_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 5.260e-16
Identity = 49/87 (56.32%), Postives = 62/87 (71.26%), Query Frame = 0
Query:   14 KKRNPEAILKKRAXXXXXXIAKLVEDGKIDPTKPVPKPDPERWIPRSHRAYGKRGRK-RNKFVGAQGSGDGAAKD--TAKLDALARA 97
            KK+N EAIL++RA      + KL  +G+ +P +P  KPDPERWIP++ R+Y +RGR+ RNKFVGAQG G GA  D   AKLDA ARA
Sbjct:  761 KKKNREAILRQRAKKREQYLKKLESEGRYNPDRPA-KPDPERWIPKNQRSYNRRGRRGRNKFVGAQGGGTGAGADREAAKLDAAARA 846          
BLAST of mRNA_Ecto-sp13_S_contig16415.4629.1 vs. uniprot
Match: W7TLA7_9STRA (Srp72 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TLA7_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 8.510e-15
Identity = 43/92 (46.74%), Postives = 64/92 (69.57%), Query Frame = 0
Query:   23 KKRAXXXXXXIAKLVEDGKIDPTKPVPKPDPERWIPRSHRAYGKRGRK-RNKFVGAQGSGDGAAKDTAKLDALARAQAKQAASEKVRKGDLR 113
            ++RA      +AKL  +GK D ++P P PDPERWI ++ R+Y KRG+K R KFVGAQGSG+GAA+D A LD  +R +A++   ++  +G ++
Sbjct:  631 RQRARARTVYLAKLTAEGKYDASRPGPPPDPERWIAKNQRSYNKRGKKGRGKFVGAQGSGNGAARDAAMLDVASRVEAEKKKGDEDGRGGVK 722          
BLAST of mRNA_Ecto-sp13_S_contig16415.4629.1 vs. uniprot
Match: A0A4D9D6J5_9STRA (MFS domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6J5_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.200e-14
Identity = 43/92 (46.74%), Postives = 64/92 (69.57%), Query Frame = 0
Query:   23 KKRAXXXXXXIAKLVEDGKIDPTKPVPKPDPERWIPRSHRAYGKRGRK-RNKFVGAQGSGDGAAKDTAKLDALARAQAKQAASEKVRKGDLR 113
            ++RA      +AKL  +GK D ++P P PDPERWI ++ R+Y KRG+K + KFVGAQGSG+GAAKD A LD  +R +A++   ++  +G ++
Sbjct: 1081 RQRARARTVYLAKLTAEGKYDASRPGPPPDPERWIAKNQRSYNKRGKKGKAKFVGAQGSGNGAAKDAAMLDVASRVEAERKKGDEEGRGGVK 1172          
BLAST of mRNA_Ecto-sp13_S_contig16415.4629.1 vs. uniprot
Match: A0A7S2SJY1_9STRA (Signal recognition particle subunit SRP72 n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJY1_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.580e-14
Identity = 48/83 (57.83%), Postives = 58/83 (69.88%), Query Frame = 0
Query:   21 ILKKRAXXXXXXIAKLVEDGKIDPTKPVPKPDPERWIPRSHRAYGKRGRK-RN-KFVGAQGSGDGAAKDTAKLDALARAQAKQ 101
            +L++R       ++ L   GK DP  P   PDPERWIP+  R+Y KRGRK RN KF GAQG+G+GAAKD AKLDA ARAQAK+
Sbjct:  599 VLRRRQMRREAYLSALTAAGKYDPKHPAT-PDPERWIPKKLRSYNKRGRKNRNAKFSGAQGTGEGAAKDAAKLDAYARAQAKK 680          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16415.4629.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D7FJ93_ECTSI2.830e-5096.26Signal recognition particle subunit SRP72 n=2 Tax=... [more]
A0A835YI58_9STRA1.820e-2055.79Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9UBM0_9STRA4.760e-1953.49Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2V151_9STRA2.290e-1855.95Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S4W6J8_9STRA8.370e-1856.32Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A812S6I0_SYMMI2.190e-1762.82SRP72 protein (Fragment) n=1 Tax=Symbiodinium micr... [more]
A0A7S1ZPJ3_9STRA5.260e-1656.32Hypothetical protein n=4 Tax=Ditylum brightwellii ... [more]
W7TLA7_9STRA8.510e-1546.74Srp72 n=2 Tax=Nannochloropsis gaditana TaxID=72520... [more]
A0A4D9D6J5_9STRA1.200e-1446.74MFS domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A7S2SJY1_9STRA1.580e-1457.83Signal recognition particle subunit SRP72 n=2 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026270Signal recognition particle, SRP72 subunitPANTHERPTHR14094SIGNAL RECOGNITION PARTICLE 72coord: 7..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16415contigEcto-sp13_S_contig16415:2510..3541 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16415.4629.1mRNA_Ecto-sp13_S_contig16415.4629.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16415 2510..3541 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16415.4629.1 ID=prot_Ecto-sp13_S_contig16415.4629.1|Name=mRNA_Ecto-sp13_S_contig16415.4629.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=113bp
LVDKASQKAERRQKKRNPEAILKKRAKKRAKYIAKLVEDGKIDPTKPVPK
PDPERWIPRSHRAYGKRGRKRNKFVGAQGSGDGAAKDTAKLDALARAQAK
QAASEKVRKGDLR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026270SRP72