prot_Ecto-sp13_S_contig16401.4621.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16401.4621.1
Unique Nameprot_Ecto-sp13_S_contig16401.4621.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length400
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16401.4621.1 vs. uniprot
Match: A0A6H5KRQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRQ1_9PHAE)

HSP 1 Score: 552 bits (1422), Expect = 2.190e-182
Identity = 349/398 (87.69%), Postives = 365/398 (91.71%), Query Frame = 0 
Query:    1 SYARECQNIPSIFSNLRRYLETELASALSGVFPGGGGEAKSASAMGAYTDSLQAYLETEAECIRRLRERARAEEAEVAAVENELVEYEGLDMPTLTTGLRAKMQQLRNEVAEDREAEHAIMSQARHQLTVLESTLSAYNSTRTKGCFISAAGGCXXXXXXXXXXXAAGIGSGTAGLDYPRPPDVSAATAKKNSGTNAAACAAGGXXXXXXXVGADSLEGSAAAAGLARVRELFALLEVVGSGEEEPLAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----FGEAAGSAALPPAGGRDARAQSSGVAATPFGQAGELEDHQGPKRRQGNSHGNGGRPRNPAPSRIRGGVRLPSPSRGGGNSLQGRLNWLDNGGPSASGTDRSSTARTPKGSAN 393
            SYARECQNIPS++SNLRRYL+++LASAL+GVFPGGGGEAKSASA+GAYTDSLQAY ETEAEC+RRLRERARA+EAEVAAVE ELVEYEGLDMPTLTTGLRA+MQQLRNEVAEDREAEHAIMSQARHQ TVLESTLSAY+STRT GC +SAA GC     XXXXX AAGIGSGTAGLDYPRPPDVSAAT KK  GT+AAA AAGG       VGA SLEGSAAAAGLARVRELFALLEVVGSGEEEPLAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     FGEAAG AALPPAG RD+RAQSSGVAATPFGQAGELEDHQGP RRQGNSHGNGGRPRNPAPSRIRGGVRLPSPSRGGGNSLQGRLNWLDNGGPSASGTDRSSTAR P+G+AN
Sbjct:  669 SYARECQNIPSVYSNLRRYLDSQLASALNGVFPGGGGEAKSASALGAYTDSLQAYFETEAECVRRLRERARADEAEVAAVEKELVEYEGLDMPTLTTGLRARMQQLRNEVAEDREAEHAIMSQARHQFTVLESTLSAYDSTRTTGCLVSAAEGCGGGGDXXXXXVAAGIGSGTAGLDYPRPPDVSAATVKKIPGTSAAASAAGGVSGANGRVGAGSLEGSAAAAGLARVRELFALLEVVGSGEEEPLAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFGEAAGGAALPPAGTRDSRAQSSGVAATPFGQAGELEDHQGPNRRQGNSHGNGGRPRNPAPSRIRGGVRLPSPSRGGGNSLQGRLNWLDNGGPSASGTDRSSTARAPEGAAN 1066
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BLAST of mRNA_Ecto-sp13_S_contig16401.4621.1 vs. uniprot
Match: D7FYK5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYK5_ECTSI)

HSP 1 Score: 217 bits (552), Expect = 4.780e-59
Identity = 117/124 (94.35%), Postives = 122/124 (98.39%), Query Frame = 0 
Query:    1 SYARECQNIPSIFSNLRRYLETELASALSGVFPGGGGEAKSASAMGAYTDSLQAYLETEAECIRRLRERARAEEAEVAAVENELVEYEGLDMPTLTTGLRAKMQQLRNEVAEDREAEHAIMSQA 124
            SY RECQNIPSIFSNLRRYLET+LASALSGVFPGGGG A+SASA+GAYTDSLQAYLETEAEC+RRLRERARAEEAEVAAVENELVEYEGLDMPTLTTGLRAKMQQLR+EVAEDREAEHAIMSQA
Sbjct:  650 SYVRECQNIPSIFSNLRRYLETQLASALSGVFPGGGGGAQSASALGAYTDSLQAYLETEAECVRRLRERARAEEAEVAAVENELVEYEGLDMPTLTTGLRAKMQQLRSEVAEDREAEHAIMSQA 773
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16401.4621.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KRQ1_9PHAE2.190e-18287.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYK5_ECTSI4.780e-5994.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 56..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16401contigEcto-sp13_S_contig16401:307..3096 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16401.4621.1mRNA_Ecto-sp13_S_contig16401.4621.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16401 307..3096 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16401.4621.1 ID=prot_Ecto-sp13_S_contig16401.4621.1|Name=mRNA_Ecto-sp13_S_contig16401.4621.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=400bp
SYARECQNIPSIFSNLRRYLETELASALSGVFPGGGGEAKSASAMGAYTD
SLQAYLETEAECIRRLRERARAEEAEVAAVENELVEYEGLDMPTLTTGLR
AKMQQLRNEVAEDREAEHAIMSQARHQLTVLESTLSAYNSTRTKGCFISA
AGGCGGGGDGGVGGVAAGIGSGTAGLDYPRPPDVSAATAKKNSGTNAAAC
AAGGASGANGSVGADSLEGSAAAAGLARVRELFALLEVVGSGEEEPLAVG
GGDQSGGDETKAAAEAVAGADGNNNNNNNRTFGEAAGSAALPPAGGRDAR
AQSSGVAATPFGQAGELEDHQGPKRRQGNSHGNGGRPRNPAPSRIRGGVR
LPSPSRGGGNSLQGRLNWLDNGGPSASGTDRSSTARTPKGSANNNNNNNN
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