prot_Ecto-sp13_S_contig164.4615.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig164.4615.1
Unique Nameprot_Ecto-sp13_S_contig164.4615.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length408
Homology
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BLAST of mRNA_Ecto-sp13_S_contig164.4615.1 vs. uniprot
Match: D7G4U8_ECTSI (SH3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4U8_ECTSI)

HSP 1 Score: 554 bits (1428), Expect = 1.490e-195
Identity = 306/328 (93.29%), Postives = 310/328 (94.51%), Query Frame = 0 
Query:   80 RSGPRPPAGAVATAMVSGGEGLPFAGKTQHEQQEEEVQARPNNPYELMVQVGATVTASYPFRGEESLQQLSFAVGDEIRVKQKEDMWSWGVLVRGGNEGWFPHNYVGTTFKPLPGIHEMAAKLKARNEKAAAAKAREDEPNPKSENADPTASSLDATAXXXXXXXXXXXXXXXDATSDVKSAPGGDIVADGATSNETHPIPNAHPPDTSTXXXXXXAAVSEDVVPGPADGVAREDEEVGGSGGNDVERKTTPKTESADKPALVSATPSLPPFLKGPTNTAGAATAVLPTSGAVREADSAEVIDATQVHGVGFAGEPPATRTGCKCTVM 407
            RSGPRPP GAVATAM+SGGEGLPFAGKTQHEQQEEEVQARPNNPYELMVQ GATVTASYPFRGEESLQQLSFAVGDEIRVKQKEDMWSWGVLVRGGNEGWFPHNYVGTTFKPLPGIHEMAAKLKARNEKAAAAKAREDEPNP+SENADPTASSLDATA    XXXXXXXXXX DATSDVKSAPGGDIVADGATSNETHPIPN H PDTST XXXX AAVSEDVVPGP DGVAREDEEVGG  GNDVE KTTPKTE+ADKPALVSATPSLPPFLKGPTNT GAATAVLPTSGAVREADSAEV+D TQVHGVGFAGE PATRTGCKCTVM
Sbjct:   57 RSGPRPPPGAVATAMLSGGEGLPFAGKTQHEQQEEEVQARPNNPYELMVQPGATVTASYPFRGEESLQQLSFAVGDEIRVKQKEDMWSWGVLVRGGNEGWFPHNYVGTTFKPLPGIHEMAAKLKARNEKAAAAKAREDEPNPQSENADPTASSLDATADHTAXXXXXXXXXXQDATSDVKSAPGGDIVADGATSNETHPIPNEHLPDTSTGXXXXTAAVSEDVVPGPVDGVAREDEEVGGGVGNDVELKTTPKTENADKPALVSATPSLPPFLKGPTNTTGAATAVLPTSGAVREADSAEVVDTTQVHGVGFAGESPATRTGCKCTVM 384
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BLAST of mRNA_Ecto-sp13_S_contig164.4615.1 vs. uniprot
Match: A0A835Z521_9STRA (SH3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z521_9STRA)

HSP 1 Score: 107 bits (268), Expect = 3.190e-22
Identity = 47/90 (52.22%), Postives = 65/90 (72.22%), Query Frame = 0 
Query:  113 EEEVQARPNNPYELMVQVGATVTASYPFRGEESLQQLSFAVGDEIRVKQKEDMWSWGVLVRGGNEGWFPHNYVGTTFKPLPGIHEMAAKL 202
            E++  A   NPY+L  + GATV A +PF G+E+L Q+ F +GD I + +K+DMWSWG +VR   EGWFP+NYV + F+PL GIHE+ AK+
Sbjct:  247 EDDSGAHGKNPYQLDAREGATVEAMFPFAGDEALLQMKFNIGDSILIMKKDDMWSWGQVVRTEQEGWFPNNYVNSAFRPLAGIHELMAKM 336
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BLAST of mRNA_Ecto-sp13_S_contig164.4615.1 vs. uniprot
Match: A0A836C9Y6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Y6_9STRA)

HSP 1 Score: 103 bits (258), Expect = 3.750e-20
Identity = 44/79 (55.70%), Postives = 60/79 (75.95%), Query Frame = 0 
Query:  124 YELMVQVGATVTASYPFRGEESLQQLSFAVGDEIRVKQKEDMWSWGVLVRGGNEGWFPHNYVGTTFKPLPGIHEMAAKL 202
            ++L+V+ G  V A++PF G+    QLSF +GD I+V QK+++WSWG LVR G EG+FPHNYV  TFKPLPG+HE+  K+
Sbjct:    7 FKLVVEEGGVVEATFPFHGDVEGSQLSFQIGDTIKVLQKDELWSWGQLVRTGEEGYFPHNYVQATFKPLPGMHELKMKM 85
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BLAST of mRNA_Ecto-sp13_S_contig164.4615.1 vs. uniprot
Match: D7FJI7_ECTSI (Pleckstrin homology (PH) domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJI7_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 9.460e-20
Identity = 45/87 (51.72%), Postives = 66/87 (75.86%), Query Frame = 0 
Query:  124 YELMVQVGATVTASYPFRGEESLQQLSFAVGDEIRVKQKEDMWSWGVLVRGGNEGWFPHNYVGTTFKPLPGIHEMAAKL---KARNE 207
            ++L V+ GATV+A++PF G+ +  QLSF +GD I++ QK+++WSWG L + G EGWFPHNYV  +F+PLPG+HE+  ++   KAR E
Sbjct:   37 FKLQVEEGATVSATFPFFGDLAGGQLSFQIGDNIKLLQKDELWSWGKLEKSGEEGWFPHNYVQASFQPLPGMHELQQRILIKKAREE 123
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig164.4615.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G4U8_ECTSI1.490e-19593.29SH3 domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835Z521_9STRA3.190e-2252.22SH3 domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A836C9Y6_9STRA3.750e-2055.70Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FJI7_ECTSI9.460e-2051.72Pleckstrin homology (PH) domain-containing protein... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001452SH3 domainSMARTSM00326SH3_2coord: 132..189
e-value: 1.7E-8
score: 44.3
IPR001452SH3 domainPFAMPF00018SH3_1coord: 136..182
e-value: 1.3E-6
score: 27.9
IPR001452SH3 domainPROSITEPS50002SH3coord: 129..190
score: 16.738
NoneNo IPR availableGENE3D2.30.30.40coord: 128..190
e-value: 1.1E-11
score: 46.3
IPR036028SH3-like domain superfamilySUPERFAMILY50044SH3-domaincoord: 112..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig164contigEcto-sp13_S_contig164:21185..25076 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig164.4615.1mRNA_Ecto-sp13_S_contig164.4615.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig164 20119..25198 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig164.4615.1 ID=prot_Ecto-sp13_S_contig164.4615.1|Name=mRNA_Ecto-sp13_S_contig164.4615.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=408bp
MPPPPIPERKEAVNPPPIPKKKESVDPPPIPEGKEAVNPPPIPEGKGVVN
PPPITEKEAVIPPPIPERKEAVNPPLIPVRSGPRPPAGAVATAMVSGGEG
LPFAGKTQHEQQEEEVQARPNNPYELMVQVGATVTASYPFRGEESLQQLS
FAVGDEIRVKQKEDMWSWGVLVRGGNEGWFPHNYVGTTFKPLPGIHEMAA
KLKARNEKAAAAKAREDEPNPKSENADPTASSLDATADATADATADATAS
SQDATSDVKSAPGGDIVADGATSNETHPIPNAHPPDTSTGTGTGTAAVSE
DVVPGPADGVAREDEEVGGSGGNDVERKTTPKTESADKPALVSATPSLPP
FLKGPTNTAGAATAVLPTSGAVREADSAEVIDATQVHGVGFAGEPPATRT
GCKCTVM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
IPR036028SH3-like_dom_sf