prot_Ecto-sp13_S_contig16292.4560.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16292.4560.1
Unique Nameprot_Ecto-sp13_S_contig16292.4560.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length100
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16292.4560.1 vs. uniprot
Match: D7FM00_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM00_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 7.600e-32
Identity = 66/98 (67.35%), Postives = 66/98 (67.35%), Query Frame = 0 
Query:    1 MKPCQLAVDQAAGAGDIEALNLLWDESNGTLFPRAAGLQMAAAAGKICTLEWAHSRGLPGFQGLMDIAAWKGRLSVLKWLQAFRNEGCTTKATTWAAQ 98
            MKP QLAVDQAAGAGDIE                            ICTLEWAHSRGLPGFQGLMDIAAWKGRLSVLKWLQA RNEGCT K TTWAAQ
Sbjct:    1 MKPSQLAVDQAAGAGDIE----------------------------ICTLEWAHSRGLPGFQGLMDIAAWKGRLSVLKWLQANRNEGCTIKGTTWAAQ 70
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16292.4560.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FM00_ECTSI7.600e-3267.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46586FAMILY NOT NAMEDcoord: 7..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16292contigEcto-sp13_S_contig16292:468..2091 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16292.4560.1mRNA_Ecto-sp13_S_contig16292.4560.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16292 468..2253 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16292.4560.1 ID=prot_Ecto-sp13_S_contig16292.4560.1|Name=mRNA_Ecto-sp13_S_contig16292.4560.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=100bp
MKPCQLAVDQAAGAGDIEALNLLWDESNGTLFPRAAGLQMAAAAGKICTL
EWAHSRGLPGFQGLMDIAAWKGRLSVLKWLQAFRNEGCTTKATTWAAQR*
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