prot_Ecto-sp13_S_contig16287.4553.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16287.4553.1
Unique Nameprot_Ecto-sp13_S_contig16287.4553.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length202
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16287.4553.1 vs. uniprot
Match: A0A6H5JSX2_9PHAE (Non-specific serine/threonine protein kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSX2_9PHAE)

HSP 1 Score: 258 bits (658), Expect = 6.300e-76
Identity = 172/207 (83.09%), Postives = 176/207 (85.02%), Query Frame = 0 
Query:    1 SSPVYLPESLSQAIYVPTQKITTLHPGVGVVAVEVATALASGQATSGDGRRDAGGDEGG--EDDIDLRLSSAALSATPALLQSVTGMHTNAVDARRAMALVEQADVDGAAGSSGRYDNSSS---SYAPXXXXXXXXXXXXXXXXXXXXXXXXXXXWEVSRVGGVGGRPDDAAALVRRAKALGVPPLPPDLGAVRAPNGAKYSHYLLD 202
            SSPVYLPESLSQAIYVPTQKITTLHPGVG VAV VATALASGQA+SGD             EDDIDLRLSS+ALSATPALLQSVTGMHTNAVDARRAMALVE ADVDGAAGSSGR+DN SS   S   XXXXXXXXXXXXXXXXXXXX       WEVSRVGGVGGRPDDA AL+RRAKALGVPPLPPDLGAVRAPNGAKYSHYLLD
Sbjct:  892 SSPVYLPESLSQAIYVPTQKITTLHPGVGAVAVAVATALASGQASSGDXXXXXXXXXXXXXEDDIDLRLSSSALSATPALLQSVTGMHTNAVDARRAMALVEHADVDGAAGSSGRHDNGSSYAASXXXXXXXXXXXXXXXXXXXXXXXGKPSAPAWEVSRVGGVGGRPDDAVALLRRAKALGVPPLPPDLGAVRAPNGAKYSHYLLD 1098
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BLAST of mRNA_Ecto-sp13_S_contig16287.4553.1 vs. uniprot
Match: D8LRQ5_ECTSI (Non-specific serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRQ5_ECTSI)

HSP 1 Score: 243 bits (619), Expect = 1.160e-70
Identity = 165/219 (75.34%), Postives = 167/219 (76.26%), Query Frame = 0 
Query:    1 SSPVYLPESLSQAIYVPTQKITTLHPGVGVVAVEVATALASGQATSGDGRRDAGGDEGGEDDIDLRLSSAALSATPALLQSVTGMHTNAVDARRAMALVEQADVDGAAGSSGRYDNSSSSYAPXXXXXXXXXXXXXXXXXXXXXXXXXXXWEVSRVGGVGGRPDDAAALVRRAK-----------------ALGVPPLPPDLGAVRAPNGAKYSHYLLD 202
            SSPVYLPESLSQAIYVPTQKITTLHPGVG VAV VA ALASGQATSGDGRRDAGGDEGGEDDIDLRLSSAALSATPALLQSVTGMHTNAVDARRAMALVEQADVDGAAGSSGR+DN       XXXXXXXXXXXXXXXX              S   GVG +P   A  V RA                  ALGVPPLPPDLGAVRAPNGAKYSHYLLD
Sbjct:  625 SSPVYLPESLSQAIYVPTQKITTLHPGVGAVAVAVAKALASGQATSGDGRRDAGGDEGGEDDIDLRLSSAALSATPALLQSVTGMHTNAVDARRAMALVEQADVDGAAGSSGRHDNXXXXXXXXXXXXXXXXXXXXXXX-------------ASSRQGVGVKPSAPAGSVSRAXXXXXXXXXXXXXXXXXXALGVPPLPPDLGAVRAPNGAKYSHYLLD 830
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16287.4553.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JSX2_9PHAE6.300e-7683.09Non-specific serine/threonine protein kinase n=1 T... [more]
D8LRQ5_ECTSI1.160e-7075.34Non-specific serine/threonine protein kinase n=1 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16287contigEcto-sp13_S_contig16287:328..1731 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16287.4553.1mRNA_Ecto-sp13_S_contig16287.4553.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16287 326..1731 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16287.4553.1 ID=prot_Ecto-sp13_S_contig16287.4553.1|Name=mRNA_Ecto-sp13_S_contig16287.4553.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=202bp
SSPVYLPESLSQAIYVPTQKITTLHPGVGVVAVEVATALASGQATSGDGR
RDAGGDEGGEDDIDLRLSSAALSATPALLQSVTGMHTNAVDARRAMALVE
QADVDGAAGSSGRYDNSSSSYAPSATLASAAAAAVASSRQGRGGKPSAPA
WEVSRVGGVGGRPDDAAALVRRAKALGVPPLPPDLGAVRAPNGAKYSHYL
LD
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