prot_Ecto-sp13_S_contig1627.4543.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1627.4543.1
Unique Nameprot_Ecto-sp13_S_contig1627.4543.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length91
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1627.4543.1 vs. uniprot
Match: A0A6H5L838_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L838_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 2.710e-53
Identity = 86/90 (95.56%), Postives = 86/90 (95.56%), Query Frame = 0 
Query:    1 MVWGSLPPRVTRVAMQAGLRCARTGLRRSGGRYAKRGGFLSTAAKVPLPDITFGVESEPALSLLGDLPLLQISQSLACPEPEGDDDGDGR 90
            MVWGSLPPRVTRVAMQAGLRCARTG RRSGGRYAKRGGFLSTAAKVPLPDITF VESEPAL LLGDLPLL ISQSLACPEPEGDDDGDGR
Sbjct:    1 MVWGSLPPRVTRVAMQAGLRCARTGSRRSGGRYAKRGGFLSTAAKVPLPDITFDVESEPALPLLGDLPLLLISQSLACPEPEGDDDGDGR 90
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BLAST of mRNA_Ecto-sp13_S_contig1627.4543.1 vs. uniprot
Match: D7FMH9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMH9_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 4.320e-10
Identity = 30/31 (96.77%), Postives = 30/31 (96.77%), Query Frame = 0 
Query:   15 MQAGLRCARTGLRRSGGRYAKRGGFLSTAAK 45
            MQAGLRCARTG RRSGGRYAKRGGFLSTAAK
Sbjct:    1 MQAGLRCARTGSRRSGGRYAKRGGFLSTAAK 31
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1627.4543.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L838_9PHAE2.710e-5395.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMH9_ECTSI4.320e-1096.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1627contigEcto-sp13_S_contig1627:13405..15771 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1627.4543.1mRNA_Ecto-sp13_S_contig1627.4543.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1627 13405..15771 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1627.4543.1 ID=prot_Ecto-sp13_S_contig1627.4543.1|Name=mRNA_Ecto-sp13_S_contig1627.4543.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=91bp
MVWGSLPPRVTRVAMQAGLRCARTGLRRSGGRYAKRGGFLSTAAKVPLPD
ITFGVESEPALSLLGDLPLLQISQSLACPEPEGDDDGDGR*
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