prot_Ecto-sp13_S_contig16230.4520.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16230.4520.1
Unique Nameprot_Ecto-sp13_S_contig16230.4520.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length413
Homology
BLAST of mRNA_Ecto-sp13_S_contig16230.4520.1 vs. uniprot
Match: D8LBB7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBB7_ECTSI)

HSP 1 Score: 635 bits (1638), Expect = 5.970e-221
Identity = 365/425 (85.88%), Postives = 379/425 (89.18%), Query Frame = 0
Query:    1 RAGSASETPTARKTAPPPLQRVEARRGEDAPAALWRSKVRGRQMVFSLLESARIEEEDMEEALLAWPPSTSEGGGRGGREAAFHSLDEIRRRNARELDALMAEYDPRPSRNLPQHALDRRLRMALPWPEITQEVVAGGNRDAASCRHAVRDQRETFGQGGRXXXXXXXXXXXXX---EHA--DIDNECNGAECAGGDRKQYHREGEGERAWSLSRSDGAGGRAAVDGGAVSG-------EIGGSDQVDDDARGGEARGKAVAGXXXXXXXXXXXXXGTEEFHPEPSPCRTSASPTCGADASDDDTEDTAVAISASPTKRAATEDGRPARGGVEGGDQTKRLETGQRKKPTLPDPNHVNGSVMADPFNMDHIKDLPGLVGGDNRGLSRIVSDTVSYIDPAFPNLEFHRRAAMDRAGYFMPGYKPQV 413
            RAGSASETPT RKTAPPPLQRVEARRGED PAALWRSKVRGRQMVFSLLE+ARIEEEDMEEALLA P STSEGGGRGGREAAFHSLDEIRRRNARELDALMAEYDPRPS NLPQH LDRRLR +LPWPEIT EVVAGGNRDAASCRHAV DQR+T GQGG+XXXXXXXXXXXXX   EHA  DIDN CNG ECAGGDR+Q H EG GE AWSLSRS GAGGRAAVDG A+ G       EIG SDQ DDDARGGEARG+AVAG XXXXXXXXX   GTE+ HPE SPCRTS SP+CGADA+D+D EDT VAISASPTK AATEDG PARGGVEGGD+TKRLETGQRKKPTLPDPN VNGSVMADPFNMDHIKDLPGL+GGD RGLSR+VSDTVSYIDPAFPNLEFHRRAAMDRAGYFMPGYKPQV
Sbjct:  260 RAGSASETPTGRKTAPPPLQRVEARRGEDVPAALWRSKVRGRQMVFSLLEAARIEEEDMEEALLACPASTSEGGGRGGREAAFHSLDEIRRRNARELDALMAEYDPRPSTNLPQHTLDRRLRKSLPWPEITDEVVAGGNRDAASCRHAVLDQRKTVGQGGQXXXXXXXXXXXXXXXXEHAGADIDNGCNGTECAGGDREQCHGEGGGEGAWSLSRSGGAGGRAAVDGKAIGGDKGEGGGEIGRSDQGDDDARGGEARGEAVAGAXXXXXXXXXAGRGTEKLHPESSPCRTSVSPSCGADAADNDAEDTTVAISASPTKGAATEDGGPARGGVEGGDETKRLETGQRKKPTLPDPNQVNGSVMADPFNMDHIKDLPGLLGGDKRGLSRLVSDTVSYIDPAFPNLEFHRRAAMDRAGYFMPGYKPQV 684          
BLAST of mRNA_Ecto-sp13_S_contig16230.4520.1 vs. uniprot
Match: A0A6H5L365_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L365_9PHAE)

HSP 1 Score: 504 bits (1297), Expect = 2.280e-170
Identity = 308/419 (73.51%), Postives = 317/419 (75.66%), Query Frame = 0
Query:    1 RAGSASETPTARKTAPPPLQRVEARRGEDAPAALWRSKVRGRQMVFSLLESARIEEEDMEEALLAWPPSTSEGGGRGGREAAFHSLDEIRRRNARELDALMAEYDPRPSRNLPQHALDRRLRMALPWPEITQEVVAGGNRDAASCRHAVRDQRETFGQGGRXXXXXXXXXXXXXEHADIDNECNGAECAGGDRKQYHREGEGERAWSLSRSDGAGGRAAVDGGAVSG-------EIGGSDQVDDDARGGEARGKAVAGXXXXXXXXXXXXXGTEEFHPEPSPCRTSASPTCGADASDDDTEDTAVAISASPTKRAATEDGRPARGGVEGGDQTKRLETGQRKKPTLPDPNHVNGSVMADPFNMDHIKDLPGLVGGDNRGLSRIVSDTVSYIDPAFPNLEFHRRAAMDRAGYFMPGYKPQ 412
            RAGSASETPTARKTAPPPLQRVE RRGED PAALWRSKVR RQMVFSLLE+ARIEEE+M                                     LDALMAEYDPRPSRNLPQ  LDRRLRMAL WPEIT EVVAGGNRDAASCRHAV DQR+T  QGGR  XXXXXXX      ADIDN CNGAECAGG+R QYH EGEGE+AWSLSRS  AGGRAAVD GA  G       EIGGSDQVDDDARGGEARG+AVAGXXXXXXXXX    GTEEFHPEPSPCRTSASPTCGADASDDD EDTAVAISASPTKRAATEDG PARGGVEGGDQTKRLETGQRK                         DLPGLVGGD RGLSR+VSDTVSYI+PAFPNLEF+RRAAMDRAGYFMPGYKPQ
Sbjct:  258 RAGSASETPTARKTAPPPLQRVETRRGEDVPAALWRSKVRRRQMVFSLLEAARIEEENM-------------------------------------LDALMAEYDPRPSRNLPQPTLDRRLRMALSWPEITDEVVAGGNRDAASCRHAVLDQRKTVDQGGRGGXXXXXXXHAD---ADIDNGCNGAECAGGNRNQYHGEGEGEKAWSLSRSGRAGGRAAVDCGATGGDEGEGGGEIGGSDQVDDDARGGEARGEAVAGXXXXXXXXXVAGRGTEEFHPEPSPCRTSASPTCGADASDDDIEDTAVAISASPTKRAATEDGGPARGGVEGGDQTKRLETGQRK-------------------------DLPGLVGGDKRGLSRLVSDTVSYINPAFPNLEFYRRAAMDRAGYFMPGYKPQ 611          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16230.4520.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBB7_ECTSI5.970e-22185.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L365_9PHAE2.280e-17073.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16230contigEcto-sp13_S_contig16230:195..3955 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16230.4520.1mRNA_Ecto-sp13_S_contig16230.4520.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16230 195..3955 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16230.4520.1 ID=prot_Ecto-sp13_S_contig16230.4520.1|Name=mRNA_Ecto-sp13_S_contig16230.4520.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=413bp
RAGSASETPTARKTAPPPLQRVEARRGEDAPAALWRSKVRGRQMVFSLLE
SARIEEEDMEEALLAWPPSTSEGGGRGGREAAFHSLDEIRRRNARELDAL
MAEYDPRPSRNLPQHALDRRLRMALPWPEITQEVVAGGNRDAASCRHAVR
DQRETFGQGGRGGGGGGGGGGGGGEHADIDNECNGAECAGGDRKQYHREG
EGERAWSLSRSDGAGGRAAVDGGAVSGEIGGSDQVDDDARGGEARGKAVA
GAGGGASATAVAGRGTEEFHPEPSPCRTSASPTCGADASDDDTEDTAVAI
SASPTKRAATEDGRPARGGVEGGDQTKRLETGQRKKPTLPDPNHVNGSVM
ADPFNMDHIKDLPGLVGGDNRGLSRIVSDTVSYIDPAFPNLEFHRRAAMD
RAGYFMPGYKPQV
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