prot_Ecto-sp13_S_contig1611.4465.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1611.4465.1
Unique Nameprot_Ecto-sp13_S_contig1611.4465.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length296
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1611.4465.1 vs. uniprot
Match: D8LCZ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCZ2_ECTSI)

HSP 1 Score: 334 bits (856), Expect = 8.290e-108
Identity = 274/299 (91.64%), Postives = 278/299 (92.98%), Query Frame = 0 
Query:    1 YLRSEECRVEEELLIAFKDSRPDLLMEAQKDRTLHRLETAIVRIAKSLRVPGDEDDEDEDIIPARETPSGTIGAAQARAQALKEKYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---RPAVASPSSGAPAPPDAKGTSEQAVRTESDGAGKASPQASDEDSARGALFGGGSRKAKPXXXXXXXXXXXXXXXXXXXXXXXGSARPSGAPEACPIIPEMSADGPGDAELDLGLGDLEASLGTGGXXXXXXLEAMIEAARREAEGLALGGEXXXXXXXXXXXXXX-DIDLT 295
            YLRSEECRVEEELLIAFKDSRPDLLMEAQKDRTLHRLETAIVRIAKSLRVPGDEDDEDEDIIPARETPSGTIGAAQARAQALKEKYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   RPAVASPSSGAP P ++KGTSEQA RTESDGAGKASPQASDEDSARGALFGGG RKAKP        XXXXXXXXXXXX   GSA PSGAP+ACPIIPE SADGPGDAE+DLGLGDLEASLGTGGXXXXXXLEAMIEAARREAEGLALGGEXXXXXXXXXXXXXX DIDLT
Sbjct:  297 YLRSEECRVEEELLIAFKDSRPDLLMEAQKDRTLHRLETAIVRIAKSLRVPGDEDDEDEDIIPARETPSGTIGAAQARAQALKEKYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPAVASPSSGAPGPANSKGTSEQAWRTESDGAGKASPQASDEDSARGALFGGGPRKAKPSPPTASPAXXXXXXXXXXXXAA-GSAWPSGAPKACPIIPETSADGPGDAEVDLGLGDLEASLGTGGXXXXXXLEAMIEAARREAEGLALGGEXXXXXXXXXXXXXXXDIDLT 594
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1611.4465.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LCZ2_ECTSI8.290e-10891.64Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1611contigEcto-sp13_S_contig1611:15153..16313 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1611.4465.1mRNA_Ecto-sp13_S_contig1611.4465.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1611 15153..16313 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1611.4465.1 ID=prot_Ecto-sp13_S_contig1611.4465.1|Name=mRNA_Ecto-sp13_S_contig1611.4465.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=296bp
YLRSEECRVEEELLIAFKDSRPDLLMEAQKDRTLHRLETAIVRIAKSLRV
PGDEDDEDEDIIPARETPSGTIGAAQARAQALKEKYGGGGETPAAARTAA
SPPFGGGGGGGGNGGASSVPPVPPPRPAVASPSSGAPAPPDAKGTSEQAV
RTESDGAGKASPQASDEDSARGALFGGGSRKAKPSPPIASSAAETAAASS
PVAAAAAGSARPSGAPEACPIIPEMSADGPGDAELDLGLGDLEASLGTGG
GGGDDDLEAMIEAARREAEGLALGGEGGGAAEESDEEEEDDIDLT*
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