prot_Ecto-sp13_S_contig15932.4355.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15932.4355.1
Unique Nameprot_Ecto-sp13_S_contig15932.4355.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length209
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig15932.4355.1 vs. uniprot
Match: Q8QNA8_ESV1K (EsV-1-179 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNA8_ESV1K)

HSP 1 Score: 401 bits (1030), Expect = 8.030e-141
Identity = 183/208 (87.98%), Postives = 194/208 (93.27%), Query Frame = 0 
Query:    1 MAFHKPCKFPITRYEGEYRATWTQRWTRIGGESGSWQFFSHARDITPDNDGEPYTWEGEFGWYNLIRPMLAGPSNDWGAFDLAGLLQINQRGELIKACGCVSLKENDLRFFIHAGITVGAHQKNRGIDNLCMTPAVYCIPGTGGKFNLALVTTNKTIGETLVEVYFLCGRGTGEVRSQLPGMHKFYRGARIKKCFANIANLFGGACGD 208
            MA HKPCKFPITRYEGEYR TWTQRWTRIGGESGSWQFFSHARDITPD+DGEPYTWEGEFGWYNLIRPMLAGPSNDWGAFDLAGLLQINQRGELIKACG VSLK+NDL FFI AGITVGA++K+ GIDNLCMTPAV+CIPG GGKF+L LVTTNK+IG+TLVEVYFLCGR T EVRS+LPGMHKFYR ARIKKCFA  A +FGGACGD
Sbjct:   20 MARHKPCKFPITRYEGEYRPTWTQRWTRIGGESGSWQFFSHARDITPDDDGEPYTWEGEFGWYNLIRPMLAGPSNDWGAFDLAGLLQINQRGELIKACGWVSLKKNDLMFFIRAGITVGAYRKDHGIDNLCMTPAVFCIPGAGGKFDLTLVTTNKSIGKTLVEVYFLCGRETAEVRSRLPGMHKFYRAARIKKCFAYTAKIFGGACGD 227
[Close]
BLAST of mRNA_Ecto-sp13_S_contig15932.4355.1 vs. uniprot
Match: D8LPJ8_ECTSI (EsV-1-179 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPJ8_ECTSI)

HSP 1 Score: 394 bits (1013), Expect = 5.160e-138
Identity = 178/208 (85.58%), Postives = 192/208 (92.31%), Query Frame = 0 
Query:    1 MAFHKPCKFPITRYEGEYRATWTQRWTRIGGESGSWQFFSHARDITPDNDGEPYTWEGEFGWYNLIRPMLAGPSNDWGAFDLAGLLQINQRGELIKACGCVSLKENDLRFFIHAGITVGAHQKNRGIDNLCMTPAVYCIPGTGGKFNLALVTTNKTIGETLVEVYFLCGRGTGEVRSQLPGMHKFYRGARIKKCFANIANLFGGACGD 208
            MAFHKPCKFPITRYEGEYR TWT+RWT IGG++GSWQFFSHAR I PDN+GE YTWEGE+GW+NL+RPMLAGPSNDWGAFDLAGLLQINQ GELIKACGCVSLK NDLR+FI AGITVGAH  +RGIDNLCMTPAV+CIPGTGGKF+L LVTTNKTIG+TLVEVYFLCGR T EVRS+LPGMHKFYR AR+KKCFAN  NLFGGACGD
Sbjct:   34 MAFHKPCKFPITRYEGEYRPTWTRRWTTIGGKNGSWQFFSHARAILPDNNGESYTWEGEYGWFNLMRPMLAGPSNDWGAFDLAGLLQINQSGELIKACGCVSLKANDLRYFIRAGITVGAHCIDRGIDNLCMTPAVFCIPGTGGKFDLTLVTTNKTIGKTLVEVYFLCGRETAEVRSRLPGMHKFYRRARLKKCFANFVNLFGGACGD 241
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15932.4355.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Q8QNA8_ESV1K8.030e-14187.98EsV-1-179 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
D8LPJ8_ECTSI5.160e-13885.58EsV-1-179 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15932contigEcto-sp13_S_contig15932:289..915 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15932.4355.1mRNA_Ecto-sp13_S_contig15932.4355.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15932 268..915 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15932.4355.1 ID=prot_Ecto-sp13_S_contig15932.4355.1|Name=mRNA_Ecto-sp13_S_contig15932.4355.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=209bp
MAFHKPCKFPITRYEGEYRATWTQRWTRIGGESGSWQFFSHARDITPDND
GEPYTWEGEFGWYNLIRPMLAGPSNDWGAFDLAGLLQINQRGELIKACGC
VSLKENDLRFFIHAGITVGAHQKNRGIDNLCMTPAVYCIPGTGGKFNLAL
VTTNKTIGETLVEVYFLCGRGTGEVRSQLPGMHKFYRGARIKKCFANIAN
LFGGACGD*
back to top