prot_Ecto-sp13_S_contig15908.4336.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15908.4336.1
Unique Nameprot_Ecto-sp13_S_contig15908.4336.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length174
Homology
BLAST of mRNA_Ecto-sp13_S_contig15908.4336.1 vs. uniprot
Match: D7FH80_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH80_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 3.080e-24
Identity = 50/66 (75.76%), Postives = 56/66 (84.85%), Query Frame = 0
Query:    1 MEGDTGSGAARPDEWGSAVLSGDATKLAELVLLWSGSKPELALSILRDCVSLLENQMALSGPVSSP 66
            MEG  GS +ARPDEWG AV SGDATKLAELVLLWSG KPE ALS++RDCVS+LE ++ALS P SSP
Sbjct:    1 MEGRAGSSSARPDEWGPAVASGDATKLAELVLLWSGLKPERALSVIRDCVSVLEKEVALSTPGSSP 66          
BLAST of mRNA_Ecto-sp13_S_contig15908.4336.1 vs. uniprot
Match: D7FTA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTA8_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 7.390e-22
Identity = 50/71 (70.42%), Postives = 56/71 (78.87%), Query Frame = 0
Query:    1 MEGDTGSGAARPDEWGSAVLSGDATKLAELVLLWSGSKPELALSILRDCVSLLENQMALSGPVSSPPSSPR 71
            MEGD GSG+ARPD WGSAV SGDAT LAELVLLW G  P  ALSILR CV++LE ++ALS P SSP  SP+
Sbjct:    1 MEGDAGSGSARPDAWGSAVASGDATGLAELVLLWCGVLPHPALSILRRCVAVLEKEVALSAPTSSPLPSPQ 71          
BLAST of mRNA_Ecto-sp13_S_contig15908.4336.1 vs. uniprot
Match: A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 5.520e-20
Identity = 49/70 (70.00%), Postives = 57/70 (81.43%), Query Frame = 0
Query:    1 MEGDTGSGAARPDEWGSAVLSGDATKLAELVLLWSGSKPELALSILRDCVSLLENQMALSGPVSSPPSSP 70
            MEGD GSG+A PD+WG AV +GDATKLAELVL+WSGS+PE ALS+LR+CV LLE + A S P SSP  SP
Sbjct:   56 MEGDVGSGSASPDKWGLAVATGDATKLAELVLVWSGSRPEAALSLLRECVLLLEEEAAFSVPDSSPLQSP 125          
BLAST of mRNA_Ecto-sp13_S_contig15908.4336.1 vs. uniprot
Match: D7FUL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUL5_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 2.550e-9
Identity = 37/51 (72.55%), Postives = 39/51 (76.47%), Query Frame = 0
Query:   16 GSAVLSGDATKLAELVLLWSGSKPELALSILRDCVSLLENQMALSGPVSSP 66
            GSAV SG ATKLAELVL+WS SKPE ALSI R CVSLLE + A S   SSP
Sbjct:   71 GSAVASGAATKLAELVLVWSVSKPERALSIARTCVSLLEKEDAHSASGSSP 121          
BLAST of mRNA_Ecto-sp13_S_contig15908.4336.1 vs. uniprot
Match: D7G2S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2S9_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 3.370e-7
Identity = 28/39 (71.79%), Postives = 34/39 (87.18%), Query Frame = 0
Query:   24 ATKLAELVLLWSGSKPELALSILRDCVSLLENQMALSGP 62
            AT+LA+LVL+WSGS+PE ALSIL+DCVSLLE + A S P
Sbjct:   56 ATRLAQLVLVWSGSEPEPALSILKDCVSLLEKEFAFSAP 94          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15908.4336.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FH80_ECTSI3.080e-2475.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTA8_ECTSI7.390e-2270.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KPY7_9PHAE5.520e-2070.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUL5_ECTSI2.550e-972.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2S9_ECTSI3.370e-771.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15908contigEcto-sp13_S_contig15908:41..1945 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15908.4336.1mRNA_Ecto-sp13_S_contig15908.4336.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15908 10..4039 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15908.4336.1 ID=prot_Ecto-sp13_S_contig15908.4336.1|Name=mRNA_Ecto-sp13_S_contig15908.4336.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=174bp
MEGDTGSGAARPDEWGSAVLSGDATKLAELVLLWSGSKPELALSILRDCV
SLLENQMALSGPVSSPPSSPRLHSHGEWGLAVTSRDTTKLPELVLVWSDS
EPERALSFLRSCVSLMEKEVALSPLPSPPITPGELFVDVWSKLSTSTPIE
LKRCRKSCLAVGWKVFLVQYRPS*
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