prot_Ecto-sp13_S_contig15880.4317.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15880.4317.1
Unique Nameprot_Ecto-sp13_S_contig15880.4317.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length543
Homology
BLAST of mRNA_Ecto-sp13_S_contig15880.4317.1 vs. uniprot
Match: D7FMH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMH0_ECTSI)

HSP 1 Score: 797 bits (2058), Expect = 1.050e-273
Identity = 438/524 (83.59%), Postives = 450/524 (85.88%), Query Frame = 0
Query:   12 LHPVLQVKGVGQVPHMAAGDPGNKNTAGGWIGEKGRGETPLASSRSRASDASSVDMDGLSALXXXXXXXXXXXXXXXXXXXXRTSSTTGGVPRSRKRGGKEGQAGGRSGVFQSISTAERIKAEARREEALLEPLVCPRQQLLKNILESSVNLQPLAVRLTNLSYWYQQRRLLGGARHMHRGAVFDPRTKRWEASVYMLGDRPSDGKLVPILTPIKSVGTTVSTKGQALALAAKSAKERDANPGAIRGPKPPGMTQLTMLQTHISILVVSDAFTGLSHADRLALVFTTLHNELAASVHRPPSLPDKSTNAISSPLPSLNTPPSSLLSPATKVKKTATALTPDSVEVGRCDPSVADEADDRSNARSGVSMQSPGYHDESNGAGAGRPLGVAVGTGESSERVVAXXXXXXXXXXXXXXXXXXXXXGGRKDVSNGGGLPVGTASLLSVHPVVPSGDINSQEERRKDGDRRQRRRHRVIRGNVKASFVGPNVEGLPVWGALDAIAGSSLLVDCRTPAQWRAETYPPTEQ 535
            LHPVLQVKGVGQVPHMAAGDPG+KNTAG WIGEKG GE PLASSRSRASDASSVDMDGLSAL                    R +S TGGVPRSRKRGGKE QAGGRSG FQS STAERIKAEARR EALLEPLVCPRQQLLKNILE+S  LQPLAVRLTNLSYWYQQRRLLGGARHMHRGAVFDPRTKRWEASVYMLGDRPSDGKLVPILTPIKSVGTT+STKGQALA+AAKSAKERDANPGA+RGPKPPGMTQLTMLQTHISILVVSDAFTGLSHADRLALVFTTLHNELAAS   PPSLPD STNA SSPLPS NTPPSSLLSPATK KKTATALTPDSVE GR DPSVADEADDRSNAR GVS+QSPGYHDES  A AGRP  +         RVVA             XXXXXXXXGGR DVSNGG LPVGTAS  SVHP++P GDINSQEERRKDGDRRQRRRHRVIRGNVKASFVG NVEGLPVWGALDAIAGSSLLVDCRTPAQWRAET+PPT+Q
Sbjct:  376 LHPVLQVKGVGQVPHMAAGDPGDKNTAGSWIGEKGMGEIPLASSRSRASDASSVDMDGLSALSSLRSRSSVRSKGSESSFNSRATSKTGGVPRSRKRGGKERQAGGRSGAFQSTSTAERIKAEARRGEALLEPLVCPRQQLLKNILETSETLQPLAVRLTNLSYWYQQRRLLGGARHMHRGAVFDPRTKRWEASVYMLGDRPSDGKLVPILTPIKSVGTTISTKGQALAIAAKSAKERDANPGAVRGPKPPGMTQLTMLQTHISILVVSDAFTGLSHADRLALVFTTLHNELAASARPPPSLPDNSTNAFSSPLPSSNTPPSSLLSPATKAKKTATALTPDSVEGGRRDPSVADEADDRSNARRGVSVQSPGYHDESKRAAAGRPHSI---------RVVAAGGERQVGEEKGSXXXXXXXXGGRNDVSNGGRLPVGTASPSSVHPIIPIGDINSQEERRKDGDRRQRRRHRVIRGNVKASFVGQNVEGLPVWGALDAIAGSSLLVDCRTPAQWRAETFPPTQQ 890          
BLAST of mRNA_Ecto-sp13_S_contig15880.4317.1 vs. uniprot
Match: A0A6H5KC52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC52_9PHAE)

HSP 1 Score: 704 bits (1816), Expect = 1.770e-237
Identity = 408/525 (77.71%), Postives = 419/525 (79.81%), Query Frame = 0
Query:   17 QVKGVGQVPHMAAGDPGNKNTAGGWIGEKGRGETPLASSRSRASDASSVDMDGLSALXXXXXXXXXXXXXXXXXXXXRTSSTTGGVPRSRKRGGKEGQAGGRSGVFQSISTAERIKAEARREEALLEPLVCPRQQLLKNILESSVNLQPLAVRLTNLSYWYQQRRLLGGARHMHRGAVFDPRTKRWEASVYMLGDRPSDGKLVPILTPIKSVGTTVSTKGQALALAAKSAKERDANPGAIRGPKPPGMTQLTMLQTHISILVVSDAFTGLSHADRLALVFTTLHNELAASVHRPPSLPDKSTNAISSPLPSLNTPPSSLLSPATKVKKTATALTPDSVEVGRCDPSVADEADDRSNARSGVSMQSPGYHDESNGAGAGRPLGVAVGTGESSERVVAXXXXXXXXXXXXXXXXXXXXXGGRKDVSNGGGLPVGTASLLSVHPVVPSGDINSQEERRKDGDRRQRRRHRVIRGNVKASFVGPNVEGLPVWGALDAIAGSSLLVDCRTPAQWRAETYPPTEQVMLGVA 541
            QVKGVGQVPHMAAGDPG+KNT GGWIGE GRGE PLASSRSRAS ASSVDMDGLSAL                    R +S TGGVPRSRKRGGKE QAGGRSGVFQS STAERIKAEAR                                        YQQRRLLGGARHMHRGAVFDPRTKRWEASVYMLGDRPSDGKLVPILTPIKSVGTTV TKGQALALAAKSAKERDANPGA+RGPKPP MTQLTML+THISILVVSDAFTGLSHADRLALVFTTLHNELAAS H PPSLPD  TNA SSPLP  NTPPSSLL  ATK KKT TAL PD+VE GR D SVAD  D R NAR GVS+QSPG+HDESN AGAGRP GVAVGTGE SERVVA  XXXXXXXXXXXXXXXX   GGR DVSNG GLPVGTASL SVHPV+P+G INSQEER KDGD+RQRRRHRVIRGNVKASFVGPNVEGLPVWGALDAIAGSSLLVDCRTPAQWRAETYPPTEQ + G A
Sbjct:  464 QVKGVGQVPHMAAGDPGDKNTPGGWIGEMGRGEIPLASSRSRASGASSVDMDGLSALSSLRSRSSARSKGSESSFNSRATSKTGGVPRSRKRGGKERQAGGRSGVFQSTSTAERIKAEAR----------------------------------------YQQRRLLGGARHMHRGAVFDPRTKRWEASVYMLGDRPSDGKLVPILTPIKSVGTTVLTKGQALALAAKSAKERDANPGAVRGPKPPMMTQLTMLETHISILVVSDAFTGLSHADRLALVFTTLHNELAASAHPPPSLPDVRTNAFSSPLPFSNTPPSSLLPQATKAKKTPTALAPDAVEEGRGDHSVADGTDGRPNARRGVSVQSPGHHDESNRAGAGRPHGVAVGTGEKSERVVAAGXXXXXXXXXXXXXXXXIEEGGRNDVSNGRGLPVGTASLSSVHPVIPTGGINSQEERGKDGDQRQRRRHRVIRGNVKASFVGPNVEGLPVWGALDAIAGSSLLVDCRTPAQWRAETYPPTEQELWGAA 948          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15880.4317.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMH0_ECTSI1.050e-27383.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KC52_9PHAE1.770e-23777.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.300.90coord: 233..309
e-value: 4.7E-5
score: 25.5
IPR036065BolA-like superfamilySUPERFAMILY82657BolA-likecoord: 271..308

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15880contigEcto-sp13_S_contig15880:731..4017 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15880.4317.1mRNA_Ecto-sp13_S_contig15880.4317.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15880 731..4041 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15880.4317.1 ID=prot_Ecto-sp13_S_contig15880.4317.1|Name=mRNA_Ecto-sp13_S_contig15880.4317.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=543bp
MSSSSRSSRSPLHPVLQVKGVGQVPHMAAGDPGNKNTAGGWIGEKGRGET
PLASSRSRASDASSVDMDGLSALSSLRSRSSARSKGSESSFNSRTSSTTG
GVPRSRKRGGKEGQAGGRSGVFQSISTAERIKAEARREEALLEPLVCPRQ
QLLKNILESSVNLQPLAVRLTNLSYWYQQRRLLGGARHMHRGAVFDPRTK
RWEASVYMLGDRPSDGKLVPILTPIKSVGTTVSTKGQALALAAKSAKERD
ANPGAIRGPKPPGMTQLTMLQTHISILVVSDAFTGLSHADRLALVFTTLH
NELAASVHRPPSLPDKSTNAISSPLPSLNTPPSSLLSPATKVKKTATALT
PDSVEVGRCDPSVADEADDRSNARSGVSMQSPGYHDESNGAGAGRPLGVA
VGTGESSERVVAAGGKRQAEKEEGSSGGGGIEEGGRKDVSNGGGLPVGTA
SLLSVHPVVPSGDINSQEERRKDGDRRQRRRHRVIRGNVKASFVGPNVEG
LPVWGALDAIAGSSLLVDCRTPAQWRAETYPPTEQVMLGVAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036065BolA-like_sf