prot_Ecto-sp13_S_contig1570.4207.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1570.4207.1
Unique Nameprot_Ecto-sp13_S_contig1570.4207.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length357
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1570.4207.1 vs. uniprot
Match: D8LRP3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRP3_ECTSI)

HSP 1 Score: 400 bits (1027), Expect = 1.910e-137
Identity = 226/271 (83.39%), Postives = 232/271 (85.61%), Query Frame = 0 
Query:   86 MPLAVLAGHPTLVSVKGIVFDVSDDEAYNHEGALAGCAGHDASRVIAASAGGRLGNGDGGGKLDAGLEGVRYEEHQRLEAYFVELARRRRAVAVLADEDHIRIFGTPLVASRDTGYTPAAATAASALAISAKTNDVKALVAELHASVEQGDAEAVRKVLFSRCQQHPGEEVEDAGEDADGDSAQTGETQPNSLLVPVDSACPRTGMSPLLKAVEGGSAEVIRVLLDAGADVRMQASAALYDGDTALDLARRLSCSGAIIEMIALASSKVPS 356
            MPLAVLAGHPTLVSVKGIVFDVSDDEAYNHEGALAGCAGHDASRVI ASAG R G GDGGGKLDAGLEG+RYEEHQRLEAYFVELAR RRAVAVL DED+I IFGTPLVAS DTGYTPAAAT ASALAI+ +TN+VKALVA LHASVEQGDAEAVR VL SR QQ PGEEVEDAG DADGDSAQ  ETQP SLLVPVDSACPRTGMSPLLKAVEGGSA+                 AALYDGDTALDLARRLSCS  IIEMI LASSKVPS
Sbjct:    1 MPLAVLAGHPTLVSVKGIVFDVSDDEAYNHEGALAGCAGHDASRVIGASAGSRRGYGDGGGKLDAGLEGLRYEEHQRLEAYFVELARSRRAVAVLTDEDYISIFGTPLVASGDTGYTPAAATTASALAINTQTNNVKALVAVLHASVEQGDAEAVRNVLSSRYQQPPGEEVEDAGGDADGDSAQIEETQPKSLLVPVDSACPRTGMSPLLKAVEGGSAK-----------------AALYDGDTALDLARRLSCSDTIIEMITLASSKVPS 254
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BLAST of mRNA_Ecto-sp13_S_contig1570.4207.1 vs. uniprot
Match: A0A836CHM5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHM5_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.770e-22
Identity = 93/245 (37.96%), Postives = 120/245 (48.98%), Query Frame = 0 
Query:   93 GHPTLVSVKGIVFDVSDDEAYNHEGALAGCAGHDASRVIAASAGGRLGNGDGGGKLDAGLEGVRYEEHQRLEAYFVELARRRRAVAVLADEDHIRIFGTPLVASRDTGYTPAAATAASALAISAKTNDVKALVAELHASVEQGDAEAVRKVLFSRCQQHPGEEVEDAGEDADGDSAQTGETQPNSLLVPVDSACPRTGMSPLLKAVEGGSAEVIRVLLDAGADVRMQASAALYDGDTALDLARRL 337
            G P LVSVKG ++DV+   A+  +  LA   GH+ASRV+A    G L + D    LD  LEG+ +++H+RLE    E+     AVA LA  D+  IFG         G++        A        D       LHA + Q D + VR+ L            EDAG                     ++ AC RTG+SPL KAVE GS ++++VLL AGAD    A AALYDGDT L LARRL
Sbjct:   19 GMPRLVSVKGRIYDVTSAAAFASDKPLARIVGHEASRVLAT---GVLQDED----LDRSLEGISFDDHRRLEKLSNEMEAAFTAVARLAAADYRAIFG---------GFSTLDGGGGGAXXXXXXXXD------GLHALIAQQDVDGVRQRL-----------QEDAGS--------------------INRACSRTGLSPLHKAVEEGSTDIVQVLLAAGAD--RSAHAALYDGDTPLQLARRL 208
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BLAST of mRNA_Ecto-sp13_S_contig1570.4207.1 vs. uniprot
Match: A0A7S2RSP5_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSP5_9STRA)

HSP 1 Score: 100 bits (248), Expect = 2.560e-20
Identity = 96/296 (32.43%), Postives = 140/296 (47.30%), Query Frame = 0 
Query:   56 AITCPLGFGGGAN------DTGRPTAASFAKRGLPRMPLAVLAGH-------PTLVSVKGIVFDVSDDEAYNHEGALAGCAGHDASRVIAASAGGRLGNGDGGGKLDAGLEGVRYEEHQRLEAYFVELARRRRAVAVLADEDHIRIFGTPLVASRDTGYTPAAATAASALAISAKTNDVKALVAELHASVEQGDAEAVRKVLFSRCQQHPGEEVEDAGEDADGDSAQTGETQPNSLLVPVDSACPRTGMSPLLKAVE-GGSAEVIRVLLDAGADVRMQASAALYDGDTALDLARRL 337
            A TCPLGFGGG++              + A + LP M LA L  H       P  VSVKG VFDV+ D+       L+ C G D SR++A      +G+ D    L+  L G+ YE+HQRLEA++   + R + VA L+ E++ ++FG          ++ A AT + A A+              H ++E  D  A+ +++                           +T P +  +     CPRT ++PL K VE GG+ E++ +LL AGADV  QA   LYDG T  +LA +L
Sbjct:   67 APTCPLGFGGGSSAQXXXXXXXXXXGQAQAHQELPEMSLAALGRHNGKIPRMPKFVSVKGSVFDVTQDKESFGVPPLSDCCGSDVSRILA------VGSFDPN-LLNQSLAGLTYEQHQRLEAFYHMFSGRFKPVARLSAENYEQLFGDTFC------FSQAPATESPAAAV--------------HDAIEHQDIAALTRLI---------------------------DTDPAAATL----LCPRTRLTPLHKVVEVGGALEMVHLLLSAGADVTAQAD--LYDGATPGNLATKL 302
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1570.4207.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LRP3_ECTSI1.910e-13783.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CHM5_9STRA1.770e-2237.96Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2RSP5_9STRA2.560e-2032.43Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 289..318
e-value: 0.0043
score: 26.3
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 289..321
score: 11.995
IPR036400Cytochrome b5-like heme/steroid binding domain superfamilyGENE3D3.10.120.10coord: 88..180
e-value: 8.6E-6
score: 27.8
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 205..343
e-value: 1.4E-10
score: 42.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 286..340
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 289..356
score: 13.655

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1570contigEcto-sp13_S_contig1570:1109..3092 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1570.4207.1mRNA_Ecto-sp13_S_contig1570.4207.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1570 1109..3092 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1570.4207.1 ID=prot_Ecto-sp13_S_contig1570.4207.1|Name=mRNA_Ecto-sp13_S_contig1570.4207.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=357bp
MSGGTCPFAAQWQRSQPSGTTAPTCPVGFGSPPPHPTTGASSSATATATA
TTTTAAITCPLGFGGGANDTGRPTAASFAKRGLPRMPLAVLAGHPTLVSV
KGIVFDVSDDEAYNHEGALAGCAGHDASRVIAASAGGRLGNGDGGGKLDA
GLEGVRYEEHQRLEAYFVELARRRRAVAVLADEDHIRIFGTPLVASRDTG
YTPAAATAASALAISAKTNDVKALVAELHASVEQGDAEAVRKVLFSRCQQ
HPGEEVEDAGEDADGDSAQTGETQPNSLLVPVDSACPRTGMSPLLKAVEG
GSAEVIRVLLDAGADVRMQASAALYDGDTALDLARRLSCSGAIIEMIALA
SSKVPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036400Cyt_B5-like_heme/steroid_sf
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom