prot_Ecto-sp13_S_contig15623.4174.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15623.4174.1
Unique Nameprot_Ecto-sp13_S_contig15623.4174.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length300
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15623.4174.1 vs. uniprot
Match: A0A6H5L6Z7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Z7_9PHAE)

HSP 1 Score: 429 bits (1103), Expect = 1.910e-138
Identity = 234/250 (93.60%), Postives = 239/250 (95.60%), Query Frame = 0 
Query:    1 MQRPGLASVPTLLLALGLALAATPTAGDLRAGWGGLRASLAANMLLAVRAIAAKMALDDYGLDEVSALFSGAKMTAGLQCLILLVVEVPRAAGGLSPRLLPHLWGVGVMEIEHQQPEGPVVSGEGAGIGVGDAGDWGEGRERARLACLLLVNGVFLYGHLLVLFALLSRLSATMFVISSGYVRAALVFVLLLALRGSTAGPRIVGMSLATLAVSAHFYRAYVRGRATSSLLNSADNADGPPRDADDGGEA 250
            MQRPGLASVPTLLLALGLALAATPTAGDLRAGWGGLRASLAAN+LLAVRAIAAKMALDDYGLDE+SALFSGA MTAGLQ LILLVVEVPRAA GLSPRLLPHLWGVGVMEI+ QQP GPV+SGEGAGIGVGDAGDWGEGRERARLACLLL NGVFLYGHLLVLFALLSRLSATMF ISSGYV AALVFVLLLALRGS AGPR+VGMSLATLAVSAHFYRAYVRGRATSSLLNSADNADG P DADDGGEA
Sbjct:  441 MQRPGLASVPTLLLALGLALAATPTAGDLRAGWGGLRASLAANILLAVRAIAAKMALDDYGLDEISALFSGATMTAGLQSLILLVVEVPRAAAGLSPRLLPHLWGVGVMEIDRQQPGGPVLSGEGAGIGVGDAGDWGEGRERARLACLLLANGVFLYGHLLVLFALLSRLSATMFAISSGYVHAALVFVLLLALRGSAAGPRMVGMSLATLAVSAHFYRAYVRGRATSSLLNSADNADGLPCDADDGGEA 690
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BLAST of mRNA_Ecto-sp13_S_contig15623.4174.1 vs. uniprot
Match: D7G6G9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6G9_ECTSI)

HSP 1 Score: 402 bits (1034), Expect = 1.410e-130
Identity = 221/250 (88.40%), Postives = 225/250 (90.00%), Query Frame = 0 
Query:    1 MQRPGLASVPTLLLALGLALAATPTAGDLRAGWGGLRASLAANMLLAVRAIAAKMALDDYGLDEVSALFSGAKMTAGLQCLILLVVEVPRAAGGLSPRLLPHLWGVGVMEIEHQQPEGPVVSGEGAGIGVGDAGDWGEGRERARLACLLLVNGVFLYGHLLVLFALLSRLSATMFVISSGYVRAALVFVLLLALRGSTAGPRIVGMSLATLAVSAHFYRAYVRGRATSSLLNSADNADGPPRDADDGGEA 250
            MQRPGLASVPTLLLALGLALAATPTAGDLRAGWGGLRASLAANMLLAVRAIAAKMALDDYGLDE+SALFSGAKMTAGLQCLILLVVEVPRAA GLSPRLLPHLWGVGVMEI+ QQP GPVVSGEGAGIGVG+AGDWGEGRERARLACLLL NGVFLYGHLLVLFALLSRLSATMF IS                RGS AGPRIVGMSLATLAVSAHFYRAYVRGRATSSLLNS DNA+G P DADDGGEA
Sbjct:  471 MQRPGLASVPTLLLALGLALAATPTAGDLRAGWGGLRASLAANMLLAVRAIAAKMALDDYGLDEISALFSGAKMTAGLQCLILLVVEVPRAAAGLSPRLLPHLWGVGVMEIDQQQPGGPVVSGEGAGIGVGEAGDWGEGRERARLACLLLANGVFLYGHLLVLFALLSRLSATMFAIS----------------RGSAAGPRIVGMSLATLAVSAHFYRAYVRGRATSSLLNSGDNAEGLPCDADDGGEA 704
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15623.4174.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L6Z7_9PHAE1.910e-13893.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6G9_ECTSI1.410e-13088.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 195..300
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..30
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 53..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 145..167
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..52
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 168..172
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 173..194
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.868
NoneNo IPR availableTMHMMTMhelixcoord: 145..167
NoneNo IPR availableTMHMMTMhelixcoord: 31..53
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
NoneNo IPR availableTMHMMTMhelixcoord: 172..194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15623contigEcto-sp13_S_contig15623:3..3105 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15623.4174.1mRNA_Ecto-sp13_S_contig15623.4174.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15623 3..3120 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15623.4174.1 ID=prot_Ecto-sp13_S_contig15623.4174.1|Name=mRNA_Ecto-sp13_S_contig15623.4174.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=300bp
MQRPGLASVPTLLLALGLALAATPTAGDLRAGWGGLRASLAANMLLAVRA
IAAKMALDDYGLDEVSALFSGAKMTAGLQCLILLVVEVPRAAGGLSPRLL
PHLWGVGVMEIEHQQPEGPVVSGEGAGIGVGDAGDWGEGRERARLACLLL
VNGVFLYGHLLVLFALLSRLSATMFVISSGYVRAALVFVLLLALRGSTAG
PRIVGMSLATLAVSAHFYRAYVRGRATSSLLNSADNADGPPRDADDGGEA
GGDATVAAGGGQEPISFAPPSPPPHRRRLPRLLRRDNDTSPAAAAPLSNS
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