prot_Ecto-sp13_S_contig1545.4076.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1545.4076.1
Unique Nameprot_Ecto-sp13_S_contig1545.4076.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length90
Homology
BLAST of mRNA_Ecto-sp13_S_contig1545.4076.1 vs. uniprot
Match: D8LNX5_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNX5_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 1.880e-49
Identity = 88/89 (98.88%), Postives = 89/89 (100.00%), Query Frame = 0
Query:    1 MRDLDTIMGKARYFATRLDGVDTAADHLSHAIALEPRFWPALVEKARLLAAVGDWEQAEDAISRVLAMDNDNLPALMLHALQGLTQAGQ 89
            MRDLDTIMGKARYFATRLDGVDTAADHLSHAIALEPRFWPALVEKARLLAAVGDWEQAEDAISRVLAMD+DNLPALMLHALQGLTQAGQ
Sbjct:  137 MRDLDTIMGKARYFATRLDGVDTAADHLSHAIALEPRFWPALVEKARLLAAVGDWEQAEDAISRVLAMDDDNLPALMLHALQGLTQAGQ 225          
BLAST of mRNA_Ecto-sp13_S_contig1545.4076.1 vs. uniprot
Match: A0A7S2R6W5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6W5_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 1.000e-12
Identity = 44/78 (56.41%), Postives = 47/78 (60.26%), Query Frame = 0
Query:    4 LDTIMGKARYFATRLDGVDTAADHLSHAIALEPRFWPALVEKARLLAAVGDWEQAEDAISRVLAMDNDNLPALMLHAL 81
            LD ++G AR      D  D A D LS AIA  P F PALVEKARLL A GDWEQA    SRVL  D DN+ AL L  L
Sbjct:  193 LDALLGIARVHELHEDW-DAAGDALSSAIARSPSFAPALVEKARLLLAKGDWEQALATTSRVLVQDPDNVQALRLQCL 269          
BLAST of mRNA_Ecto-sp13_S_contig1545.4076.1 vs. uniprot
Match: A0A6U5AVN5_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U5AVN5_HEMAN)

HSP 1 Score: 66.2 bits (160), Expect = 1.070e-10
Identity = 33/79 (41.77%), Postives = 49/79 (62.03%), Query Frame = 0
Query:    3 DLDTIMGKARYFATRLDGVDTAADHLSHAIALEPRFWPALVEKARLLAAVGDWEQAEDAISRVLAMDNDNLPALMLHAL 81
            D+D ++G+ARY       +D A + L+  +   P F PAL EKAR+L A+GDW+QA DA +R L +  +N+ +L L  L
Sbjct:  184 DVDAVLGRARYHEQVTKELDAAVEELNQCVVQFPWFTPALSEKARVLMALGDWDQAIDASNRSLTLTPNNIESLRLSVL 262          
BLAST of mRNA_Ecto-sp13_S_contig1545.4076.1 vs. uniprot
Match: A0A7S0S5T6_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S5T6_9CHLO)

HSP 1 Score: 65.1 bits (157), Expect = 2.730e-10
Identity = 36/86 (41.86%), Postives = 51/86 (59.30%), Query Frame = 0
Query:    3 DLDTIMGKARYFATRLDGVDTAADHLSHAIALEPRFWPALVEKARLLAAVGDWEQAEDAISRVLAMDNDNLPALMLHALQGLTQAG 88
            DL+ ++G+++    R   +  A + L+        F PALVEKARLL AVGDWEQA D I  +L++D  N+ AL   AL  +T+ G
Sbjct:  186 DLEAMLGRSKVAEVR-HNLSGALEGLTEVAVRFSWFMPALVEKARLLLAVGDWEQANDTIHSILSVDPQNIMALAWQALHAITREG 270          
BLAST of mRNA_Ecto-sp13_S_contig1545.4076.1 vs. uniprot
Match: A0A1Y1IE71_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IE71_KLENI)

HSP 1 Score: 64.7 bits (156), Expect = 3.730e-10
Identity = 34/85 (40.00%), Postives = 52/85 (61.18%), Query Frame = 0
Query:    2 RDLDTIMGKARYFATRLDGVDTAADHLSHAIALEPRFWPALVEKARLLAAVGDWEQAEDAISRVLAMDNDNLPALMLHALQGLTQ 86
            RDL+ ++G+ + +  + +  + A +H++  I     F P L EKA+LL AVGDWEQA +   R+L +D  N+ AL L AL  L+Q
Sbjct:  189 RDLEAMLGQVKCWEVKKE-YNRALEHINQVIVAHSWFIPGLTEKAKLLVAVGDWEQAMEVAQRILTVDPANIDALRLSALYLLSQ 272          
BLAST of mRNA_Ecto-sp13_S_contig1545.4076.1 vs. uniprot
Match: L1J727_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J727_GUITC)

HSP 1 Score: 63.2 bits (152), Expect = 1.300e-9
Identity = 34/84 (40.48%), Postives = 52/84 (61.90%), Query Frame = 0
Query:    3 DLDTIMGKARYFATRLDGVDTAADHLSHAIALEPRFWPALVEKARLLAAVGDWEQAEDAISRVLAMDNDNLPALMLHALQGLTQ 86
            D++ ++GKA  F  R   +  A + ++  I     F PA+ EKARLL A GDW+QA ++++R L +D +NL ALM+ AL  L +
Sbjct:  185 DIEAVLGKAA-FLERYKPLPEAIEFMNQFIVKFSWFAPAITEKARLLIAGGDWDQAIESVNRALNLDGNNLDALMMSALHALVK 267          
BLAST of mRNA_Ecto-sp13_S_contig1545.4076.1 vs. uniprot
Match: A0A835YQQ5_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YQQ5_9CHLO)

HSP 1 Score: 60.8 bits (146), Expect = 8.430e-9
Identity = 35/86 (40.70%), Postives = 48/86 (55.81%), Query Frame = 0
Query:    3 DLDTIMGKARYFATRLDGVDTAADHLSHAIALEPRFWPALVEKARLLAAVGDWEQAEDAISRVLAMDNDNLPALMLHALQGLTQAG 88
            DL  ++GKA+    + + +    D L+        F PALVEK RLL AVGDWEQ  +++ RVLA D  N+ AL    +  LT+ G
Sbjct:  130 DLQALLGKAKVLECKKN-LGACIDVLAEVNVRFGWFVPALVEKCRLLMAVGDWEQVTESLQRVLASDGQNIMALAWQCMLSLTREG 214          
BLAST of mRNA_Ecto-sp13_S_contig1545.4076.1 vs. uniprot
Match: A0A8J2X041_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X041_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 2.610e-7
Identity = 32/85 (37.65%), Postives = 53/85 (62.35%), Query Frame = 0
Query:    3 DLDTIMGKARYFATRLDGVDTAADHLSHAIALEPRFW-PALVEKARLLAAVGDWEQAEDAISRVLAMDNDNLPALMLHALQGLTQ 86
            DL+++M +A Y+      + +A D L+ A+AL+   W PAL+EKA++L  +GDWEQA + + RVL  +  ++  L L+ L  + Q
Sbjct:  161 DLESLMARACYYELMKQYL-SALDFLNQAVALQS--WSPALLEKAKVLVHLGDWEQAAETLQRVLQQNEGSMEGLRLNVLMHMVQ 242          
BLAST of mRNA_Ecto-sp13_S_contig1545.4076.1 vs. uniprot
Match: A0A7S3NEL9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NEL9_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 4.350e-7
Identity = 32/88 (36.36%), Postives = 57/88 (64.77%), Query Frame = 0
Query:    2 RDLDTIMGKARYFA--TRLDGVDTAADHLSHAIALEPRFWPALVEKARLLAAVGDWEQAEDAISRVLAMDNDN---LPALMLHALQGL 84
            RD+D ++ +A+ +A  +  + ++ A +HL+ A ALE  + PA++ KA+LL A+GDWEQ+ D  SR++   +++   + AL + AL  L
Sbjct:   74 RDVDWLLARAKSYAIGSTPEKLELALEHLNQATALENGWIPAIMLKAKLLLALGDWEQSRDTASRLINEKDESKSSVEALQILALYEL 161          
BLAST of mRNA_Ecto-sp13_S_contig1545.4076.1 vs. uniprot
Match: F0YIN6_AURAN (Uncharacterized protein TPR3 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIN6_AURAN)

HSP 1 Score: 54.3 bits (129), Expect = 1.700e-6
Identity = 32/78 (41.03%), Postives = 48/78 (61.54%), Query Frame = 0
Query:   10 KARYFATRLDGVDTAADHLSHAIALEPRFW-PALVEKARLLAAVGDWEQAEDAISRVLAMDNDNLPALMLHALQGLTQ 86
            +ARY+         A D L+ A+AL+   W PAL+EKA++L  +GDW+QA + I RVL  +  ++ AL L+ L  +TQ
Sbjct:  152 RARYYEMAKQ-YPRALDFLNQAVALQS--WAPALLEKAKILTTLGDWDQAMEMIQRVLQQNERSMEALRLNVLMQMTQ 226          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1545.4076.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D8LNX5_ECTSI1.880e-4998.88Flagellar associated protein n=1 Tax=Ectocarpus si... [more]
A0A7S2R6W5_9STRA1.000e-1256.41Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6U5AVN5_HEMAN1.070e-1041.77Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A7S0S5T6_9CHLO2.730e-1041.86Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
A0A1Y1IE71_KLENI3.730e-1040.00Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
L1J727_GUITC1.300e-940.48Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A835YQQ5_9CHLO8.430e-940.70Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
A0A8J2X041_9STRA2.610e-737.65Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3NEL9_9STRA4.350e-736.36Hypothetical protein (Fragment) n=1 Tax=Aureoumbra... [more]
F0YIN6_AURAN1.700e-641.03Uncharacterized protein TPR3 n=1 Tax=Aureococcus a... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 14..90
e-value: 2.6E-9
score: 39.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 16..81
NoneNo IPR availablePFAMPF14559TPR_19coord: 22..74
e-value: 6.4E-6
score: 26.6
IPR040364Tetratricopeptide repeat protein 21A/21BPANTHERPTHR14699STI2 PROTEIN-RELATEDcoord: 2..89
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 22..72
score: 8.755

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1545contigEcto-sp13_S_contig1545:457..1499 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1545.4076.1mRNA_Ecto-sp13_S_contig1545.4076.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1545 427..1499 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1545.4076.1 ID=prot_Ecto-sp13_S_contig1545.4076.1|Name=mRNA_Ecto-sp13_S_contig1545.4076.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=90bp
MRDLDTIMGKARYFATRLDGVDTAADHLSHAIALEPRFWPALVEKARLLA
AVGDWEQAEDAISRVLAMDNDNLPALMLHALQGLTQAGQA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR040364TTC21A/TTC21B
IPR013026TPR-contain_dom