prot_Ecto-sp13_S_contig15418.4058.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15418.4058.1
Unique Nameprot_Ecto-sp13_S_contig15418.4058.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length393
Homology
BLAST of mRNA_Ecto-sp13_S_contig15418.4058.1 vs. uniprot
Match: D8LIB7_ECTSI (Rhomboid-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB7_ECTSI)

HSP 1 Score: 622 bits (1605), Expect = 5.880e-217
Identity = 364/405 (89.88%), Postives = 371/405 (91.60%), Query Frame = 0
Query:    1 FSGDGSDEEPEMSEFAESQFINSEFNDSHLGTEYSTYGTSELSGQEGDAGG--SRFVGTREWARQQRSQNSSQFTADRDGGASAGPWSGPGRQTSGWDKDGGGRQHRGRGKYAGEDGRMHDLPPMPDKKQMPSNHSVLSHDLSGFSDFDPTPKNTHRHQRDASESVGSGGSGGAAGDITAPHPAPSDRINWNRGLTGAAAAAADADARNLARKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG----------RKKPRPPAAHSGPPDPRKVEANGAAVRDMGDMKEEGSGSGMSAFRASTLEAQRTHGDPFDDRPRNENGTTGEYAVPTYRSLIFTPLMFLICLILLFWEFGLNGWAAESLEENPSYGPSVETLIEAGAKRTDLIVDNGDWWRLIS 393
            FSG+GSD EPEMSEFAE       FNDSHLGTEYSTYGT E SG+EGDAGG  SRFVGT EWARQQRSQNSSQFTADRDGGASAGPWSGPGR+TSGWDKDGGGRQHRGRGKYAGEDGRMHDLPPMPDKKQMPSNHSVLSHDLSGFSDFDPTPK+THR QRDASESVGSGGSGGAAGDI APHPAPSDRINWNRGLTGAAAAAADADARNLARKQXXXXXXXXX     XXXXXXXXXXXXXXXXXXXXXX           +KKP PP+AHSGPPDPRK +ANGAAVRDMGDMKEEGSGSGMSAFRASTLEAQRTHGDPFDDRPRNENGTTGEYAVPTYRSLIFTPLMFLICLILLFWEFGLNGW AESLEENPSYGPSVETLIEAGAKRTDLIVDNGDWWRLIS
Sbjct:   78 FSGEGSDGEPEMSEFAEXXXXXXXFNDSHLGTEYSTYGT-EYSGEEGDAGGGGSRFVGTTEWARQQRSQNSSQFTADRDGGASAGPWSGPGRETSGWDKDGGGRQHRGRGKYAGEDGRMHDLPPMPDKKQMPSNHSVLSHDLSGFSDFDPTPKSTHR-QRDASESVGSGGSGGAAGDIRAPHPAPSDRINWNRGLTGAAAAAADADARNLARKQXXXXXXXXXDLAQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKPWPPSAHSGPPDPRKGQANGAAVRDMGDMKEEGSGSGMSAFRASTLEAQRTHGDPFDDRPRNENGTTGEYAVPTYRSLIFTPLMFLICLILLFWEFGLNGWEAESLEENPSYGPSVETLIEAGAKRTDLIVDNGDWWRLIS 480          
BLAST of mRNA_Ecto-sp13_S_contig15418.4058.1 vs. uniprot
Match: A0A6H5JTL7_9PHAE (Rhomboid-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTL7_9PHAE)

HSP 1 Score: 598 bits (1542), Expect = 6.320e-208
Identity = 357/404 (88.37%), Postives = 368/404 (91.09%), Query Frame = 0
Query:    1 FSGDGSDEEPEMSEFAESQFINSEFNDSHLGTEYSTYGTSELSGQEGDAGG--SRFVGTREWARQQRSQNSSQFTADRDGGASAGPWSGPGRQTSGWDKDGGGRQHRGRGKYAGEDGRMHDLPPMPDKKQMPSNHSVLSHDLSGFSDFDPTPKNTHRHQRDASESVGSGGSGGAAGDITAPHPAPSDRINWNRGLTGAAAAAADADARNLARKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRKKPRPP---------AAHSGPPDPRKVEANGAAVRDMGDMKEEGSGSGMSAFRASTLEAQRTHGDPFDDRPRNENGTTGEYAVPTYRSLIFTPLMFLICLILLFWEFGLNGWAAESLEENPSYGPSVETLIEAGAKRTDLIVDNGDWWRLIS 393
            FSGDGSDEEPEMSEFAESQF+NSEFNDSH+GTEYS YG SELSG EGDAGG  SRFVGTREWARQQRSQNSSQFTADRDGGASAGPWSGPGRQ+SGW+ DGGGRQH  RGKYAGEDGRMHDLPPMPD KQMPSNHSVLSHDLSGFSDFDPTPK+TH H+RD  ESV SGGSGGAAGDITAPHP PSDRINWNRGLTGAAAAAADADARNLARK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 AAH+GPPDPRK EA+GAA+RDMGDMKEEGSGSGMSAFRASTLEAQRTHGDPFDDRPRNENGTTGEYAVP+YRSLIFTPLMFLICLILLFWEFGLNGW AE LEENPSYGPSVETLI+AGAKR DLIVDNGDWWRLIS
Sbjct:   78 FSGDGSDEEPEMSEFAESQFMNSEFNDSHVGTEYSAYGNSELSGPEGDAGGGGSRFVGTREWARQQRSQNSSQFTADRDGGASAGPWSGPGRQSSGWNMDGGGRQHSRRGKYAGEDGRMHDLPPMPDNKQMPSNHSVLSHDLSGFSDFDPTPKSTH-HKRD--ESVSSGGSGGAAGDITAPHPPPSDRINWNRGLTGAAAAAADADARNLARKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAHNGPPDPRKGEADGAAMRDMGDMKEEGSGSGMSAFRASTLEAQRTHGDPFDDRPRNENGTTGEYAVPSYRSLIFTPLMFLICLILLFWEFGLNGWVAEPLEENPSYGPSVETLIDAGAKRGDLIVDNGDWWRLIS 478          
BLAST of mRNA_Ecto-sp13_S_contig15418.4058.1 vs. uniprot
Match: A0A7S2I4X1_9STRA (Rhomboid-like protein n=2 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I4X1_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 2.190e-10
Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 0
Query:  332 FTPLMFLICLILLFWEFGLNGWAAESLEENPSYGPSVETLIEAGAKRTDLIVDNGDWWRLIS 393
            FT ++ ++C  LL    G+NGW  ES   NP  GPS ETLI+ GAK+T+LIV+ G+W+RL S
Sbjct:  164 FTIIVMVVCTALLVASIGVNGWKVESFSSNPMIGPSAETLIKMGAKQTNLIVNQGEWFRLFS 225          
BLAST of mRNA_Ecto-sp13_S_contig15418.4058.1 vs. uniprot
Match: A0A1E7F3K6_9STRA (Rhomboid-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F3K6_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 3.510e-9
Identity = 37/88 (42.05%), Postives = 52/88 (59.09%), Query Frame = 0
Query:  310 DRPRNENGTTGEYAVPTYRSLIFTPL----MFLICLILLFWEFGLNGWAAESLEENPSYGPSVETLIEAGAKRTDLIVDNGDWWRLIS 393
            D+ R E G+ G      + S+   PL    + ++C I++F  FG+NGW  E L  NP  GPS ETLI+ GA+ T LIV+ G W+RL +
Sbjct:   91 DKSRCEGGSGGGGGSFGFLSVTNRPLFTYGVMILCTIMMFVTFGVNGWKFEPLTINPLIGPSSETLIQCGARDTALIVNEGQWFRLFT 178          
BLAST of mRNA_Ecto-sp13_S_contig15418.4058.1 vs. uniprot
Match: A0A7S3PMX5_9STRA (Rhomboid-like protein n=4 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PMX5_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 6.650e-9
Identity = 34/77 (44.16%), Postives = 46/77 (59.74%), Query Frame = 0
Query:  321 EYAVPTYRSLIFTPLMFL----ICLILLFWEFGLNGWAAESLEENPSYGPSVETLIEAGAKRTDLIVDNGDWWRLIS 393
            EY +   R   + PL  L    +C I+      +NGWA E ++ NP  GP VETL++ GAK +DLI D GDWWRL++
Sbjct:   45 EYYIKHARPKTYKPLFTLGFLCLCCIMFVVSIAMNGWAVEPVQINPLIGPGVETLLDLGAKESDLIQD-GDWWRLLA 120          
BLAST of mRNA_Ecto-sp13_S_contig15418.4058.1 vs. uniprot
Match: A0A6T7HMA0_9STRA (Rhomboid-like protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7HMA0_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 3.550e-8
Identity = 28/62 (45.16%), Postives = 40/62 (64.52%), Query Frame = 0
Query:  332 FTPLMFLICLILLFWEFGLNGWAAESLEENPSYGPSVETLIEAGAKRTDLIVDNGDWWRLIS 393
            FT  + ++C   L    G+NGW  E L+ NP  GPS +TLI+ GAK+++LIV+    WRL+S
Sbjct:  383 FTYFILIVCTAALITSIGMNGWVVEELKVNPMIGPSAQTLIDMGAKKSNLIVNENQAWRLVS 444          
BLAST of mRNA_Ecto-sp13_S_contig15418.4058.1 vs. uniprot
Match: A0A7S2K7L5_9STRA (Rhomboid-like protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K7L5_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.320e-7
Identity = 29/62 (46.77%), Postives = 41/62 (66.13%), Query Frame = 0
Query:  332 FTPLMFLICLILLFWEFGLNGWAAESLEENPSYGPSVETLIEAGAKRTDLIVDNGDWWRLIS 393
            FT  + L+C I+L    G NGW  +S+  NP  GPS ETLI+ GAK ++LIV+ G  +RL++
Sbjct:  449 FTYSLLLVCSIMLIASIGANGWVVDSVTANPMIGPSAETLIDMGAKESNLIVNEGQGFRLLA 510          
BLAST of mRNA_Ecto-sp13_S_contig15418.4058.1 vs. uniprot
Match: A0A835Z6N5_9STRA (Rhomboid-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6N5_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 3.850e-7
Identity = 25/48 (52.08%), Postives = 33/48 (68.75%), Query Frame = 0
Query:  346 WEFGLNGWAAESLEENPSYGPSVETLIEAGAKRTDLIVDNGDWWRLIS 393
            W F    W  E++  NP  GPSVE LI++GAKR DLI+ +G+ WRL+S
Sbjct:    3 WTFSNGEWKVENIHVNPMLGPSVEALIDSGAKRGDLIIQDGEGWRLVS 50          
BLAST of mRNA_Ecto-sp13_S_contig15418.4058.1 vs. uniprot
Match: A0A7S0A294_9STRA (Rhomboid-like protein (Fragment) n=1 Tax=Rhizosolenia setigera TaxID=3005 RepID=A0A7S0A294_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.080e-6
Identity = 24/47 (51.06%), Postives = 30/47 (63.83%), Query Frame = 0
Query:  347 EFGLNGWAAESLEENPSYGPSVETLIEAGAKRTDLIVDNGDWWRLIS 393
                NGW+ E +  NP  GPS ETLI+ GAK TDLIV+    WRL++
Sbjct:    2 SIAFNGWSVEPISTNPMIGPSAETLIQLGAKYTDLIVNENQVWRLVT 48          
BLAST of mRNA_Ecto-sp13_S_contig15418.4058.1 vs. uniprot
Match: A0A8J9X254_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X254_PHATR)

HSP 1 Score: 59.7 bits (143), Expect = 1.820e-6
Identity = 23/45 (51.11%), Postives = 34/45 (75.56%), Query Frame = 0
Query:  349 GLNGWAAESLEENPSYGPSVETLIEAGAKRTDLIVDNGDWWRLIS 393
            GLNGW    L+ NP +GPS + L++AGA++T LIVD+G W+R+ +
Sbjct:    6 GLNGWKFAPLDVNPLFGPSAQALLDAGARQTALIVDDGQWFRIFT 50          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15418.4058.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D8LIB7_ECTSI5.880e-21789.88Rhomboid-like protein n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5JTL7_9PHAE6.320e-20888.37Rhomboid-like protein n=1 Tax=Ectocarpus sp. CCAP ... [more]
A0A7S2I4X1_9STRA2.190e-1051.61Rhomboid-like protein n=2 Tax=Helicotheca tamesis ... [more]
A0A1E7F3K6_9STRA3.510e-942.05Rhomboid-like protein n=1 Tax=Fragilariopsis cylin... [more]
A0A7S3PMX5_9STRA6.650e-944.16Rhomboid-like protein n=4 Tax=Aplanochytrium stocc... [more]
A0A6T7HMA0_9STRA3.550e-845.16Rhomboid-like protein (Fragment) n=1 Tax=Attheya s... [more]
A0A7S2K7L5_9STRA1.320e-746.77Rhomboid-like protein (Fragment) n=1 Tax=Leptocyli... [more]
A0A835Z6N5_9STRA3.850e-752.08Rhomboid-like protein n=1 Tax=Tribonema minus TaxI... [more]
A0A7S0A294_9STRA1.080e-651.06Rhomboid-like protein (Fragment) n=1 Tax=Rhizosole... [more]
A0A8J9X254_PHATR1.820e-651.11Hypothetical protein (Fragment) n=2 Tax=Phaeodacty... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 209..229
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 327..346
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 347..393
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..326

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15418contigEcto-sp13_S_contig15418:1606..3603 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15418.4058.1mRNA_Ecto-sp13_S_contig15418.4058.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15418 1606..3603 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15418.4058.1 ID=prot_Ecto-sp13_S_contig15418.4058.1|Name=mRNA_Ecto-sp13_S_contig15418.4058.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=393bp
FSGDGSDEEPEMSEFAESQFINSEFNDSHLGTEYSTYGTSELSGQEGDAG
GSRFVGTREWARQQRSQNSSQFTADRDGGASAGPWSGPGRQTSGWDKDGG
GRQHRGRGKYAGEDGRMHDLPPMPDKKQMPSNHSVLSHDLSGFSDFDPTP
KNTHRHQRDASESVGSGGSGGAAGDITAPHPAPSDRINWNRGLTGAAAAA
ADADARNLARKQQQERDAAAADLAQKRAAKKAAVAGATVAGGSDSSGSGR
KKPRPPAAHSGPPDPRKVEANGAAVRDMGDMKEEGSGSGMSAFRASTLEA
QRTHGDPFDDRPRNENGTTGEYAVPTYRSLIFTPLMFLICLILLFWEFGL
NGWAAESLEENPSYGPSVETLIEAGAKRTDLIVDNGDWWRLIS
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