prot_Ecto-sp13_S_contig15366.4029.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15366.4029.1
Unique Nameprot_Ecto-sp13_S_contig15366.4029.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length174
Homology
BLAST of mRNA_Ecto-sp13_S_contig15366.4029.1 vs. uniprot
Match: A0A6H5K9K2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9K2_9PHAE)

HSP 1 Score: 254 bits (650), Expect = 3.840e-80
Identity = 131/164 (79.88%), Postives = 136/164 (82.93%), Query Frame = 0
Query:   23 MLNEHSGQEAAVEVRDDAVENLRPGPRDVALVKKSVTAELDHFLWLQSIWGMVIDLPPTREMIMTSWTYLVELLAAGRARKLTTRTGSTFILSRFQTWPDRLRTWINHESVQEVARTRQDDQGRHYLCCIINVVDE------------ELYRVLVEEREKSNTV 174
            MLN HSGQEAAVEVRDDAVENLR GPRDVA VKK VTA LDHF WLQSIWGM ID+PPTREMIMTSW YLV+LLAAGRARK TTRT STF LSRF+ WPDR+RTWINHESVQEVARTRQ DQG HYL CIINVVDE            ELYRV +EEREKSNTV
Sbjct:    1 MLNAHSGQEAAVEVRDDAVENLRAGPRDVAQVKKGVTAALDHFPWLQSIWGMGIDIPPTREMIMTSWKYLVDLLAAGRARKPTTRTASTFTLSRFEAWPDRIRTWINHESVQEVARTRQGDQGTHYLRCIINVVDECYGEGVKPISGQELYRVFMEEREKSNTV 164          
BLAST of mRNA_Ecto-sp13_S_contig15366.4029.1 vs. uniprot
Match: A0A6H5K0V2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0V2_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 1.650e-20
Identity = 57/143 (39.86%), Postives = 77/143 (53.85%), Query Frame = 0
Query:   17 LSPVA-AMLNEHSGQEAAVEVRDDAVENLRPGPRDVALVKKSVTAELDHFLWLQSIWGMVIDLPPTREMIMTSWTYLVELLAAGRARKLTTRTGSTFILSRFQTWPDRLRTWINHESVQEVARTRQDDQGRHYLCCIINVVDE 158
            LS VA A+L +H G+       DD +E +      +A V   +    D   W+  +W  V  L PTRE+I+ SW  L+ LL   +  K +TRT + F L RF TW  RLR WI H+++QEVA T + D  R  L CI N +DE
Sbjct:   70 LSAVASAVLQDHLGK--LERSADDIMEQM------LASVMNHLDQTCD---WMLPMWEKVKTLQPTRELIVCSWGSLLNLLENEKKNKPSTRTATAFTLKRFDTWEKRLRAWIEHDAIQEVAHTEKGDAARRTLSCICNTIDE 201          
BLAST of mRNA_Ecto-sp13_S_contig15366.4029.1 vs. uniprot
Match: A0A6H5KW14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW14_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 1.940e-11
Identity = 59/174 (33.91%), Postives = 61/174 (35.06%), Query Frame = 0
Query:    1 MVGEDSEDEVEQDLEILSPVAAMLNEHSGQEAAVEVRDDAVENLRPGPRDVALVKKSVTAELDHFLWLQSIWGMVIDLPPTREMIMTSWTYLVELLAAGRARKLTTRTGSTFILSRFQTWPDRLRTWINHESVQEVARTRQDDQGRHYLCCIINVVDEELYRVLVEEREKSNTV 174
            MVGEDS+DEVEQDLEILSPVAAMLNEHSGQ                                                                                                                DQGRHYLCCIINVVDEELYRV V+EREKSNTV
Sbjct:   62 MVGEDSDDEVEQDLEILSPVAAMLNEHSGQ---------------------------------------------------------------------------------------------------------------GDQGRHYLCCIINVVDEELYRVFVKEREKSNTV 124          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15366.4029.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K9K2_9PHAE3.840e-8079.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0V2_9PHAE1.650e-2039.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KW14_9PHAE1.940e-1133.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15366contigEcto-sp13_S_contig15366:2135..3225 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15366.4029.1mRNA_Ecto-sp13_S_contig15366.4029.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15366 2135..3967 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15366.4029.1 ID=prot_Ecto-sp13_S_contig15366.4029.1|Name=mRNA_Ecto-sp13_S_contig15366.4029.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=174bp
MVGEDSEDEVEQDLEILSPVAAMLNEHSGQEAAVEVRDDAVENLRPGPRD
VALVKKSVTAELDHFLWLQSIWGMVIDLPPTREMIMTSWTYLVELLAAGR
ARKLTTRTGSTFILSRFQTWPDRLRTWINHESVQEVARTRQDDQGRHYLC
CIINVVDEELYRVLVEEREKSNTV
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