prot_Ecto-sp13_S_contig15355.4022.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig15355.4022.1
Unique Name	prot_Ecto-sp13_S_contig15355.4022.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	681

Homology

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BLAST of mRNA_Ecto-sp13_S_contig15355.4022.1 vs. uniprot
Match: D7FM48_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM48_ECTSI)

HSP 1 Score: 864 bits (2233), Expect = 2.570e-310
Identity = 496/585 (84.79%), Postives = 511/585 (87.35%), Query Frame = 0

Query:   99 MPLATAATTAVPPAPSAQSPAAAAVLFGTENYPPVGASSGVDRLRKRSRLCLGKHRRALPSQHAAVSQPSLGTAGSPSFQERFRSPYTSSAALAPPAEAIGYPWGTSPGLSEGRIDRAGVLAPATWTIGRPSSGQSPPFVGLENLGETCYVNAVLQALTACHGALTSSHGGGGGWHDVGSEXXXXXXXXXXXXXXXXXXXXXAGTAVPVGGETGTQRDPVLIALEQVLGEMETRNRALFQQQLVAAGSETAVSPPAEPESTGSGATSSPESKTCQPYHQTPLRPSASTGEGVLVEAIAPTSLIELIRGGWLSADRARLGGGGAGAAGLTDFGTGQACVSELLGKFLGLVVDDRGSRPTSPGGVGGQRRSGGTHSSSLCGLAQAFRGTLCARTLCVECERDRTARENFTELTLPPLLPP-QHAPPLTAQGAIPAAENDGGPSLRGRRRTMQTLVDGVFESESLAGNNKLSDSGGGFYDLIGAILHQGQTLASGHYTFARHAA--DSASFLEQXXXXXXXXXXXXXXXXXXXXXXXXXXXSTCGKSSVALFDDATVRWLSPEEERAVLRGGGGGFGDPFLVFYARRP 680
            MP ATAATTAV PAPSAQS   AAVLFG EN+PPVG+SSGV+RLRKRSRLCLGK RRALP+QHAAV QPS+GTAGSPSFQERFRSP+TSSAALAPPAEAIGYPWG SPGLSE  +DRAGVLAPA WTI RPSSG SPPFVGL+NLGETCYVNAVLQALTACHG LTSS GGGGGWHDVGSE                      GTAV V G TGTQR+PVL ALEQVLGEMETRNRAL QQQLVA GS+TAVS PAEPESTGSGATSSPESKTCQPY QTPLRPSASTGEGVLVEAIAPT L+ELIRGGWLSADR+RLGGGGAGA G T+FGTGQACVSELLGKFLGLVVDD GS  TS GGVGG RRSGG+HSSS C LAQAFRGTLCARTLCVECERDRTARE+FTELTLPPLLPP QHAPPLTAQGAIPAAENDGGPSLRGRRRTMQTLVDGVFE ESLAGNNKL DSG  FYDLIG ILHQGQTLASGHYTFA HAA  DSASFLE XXXXXXXXXXXXXXXXXXXXXXXX   STCGK   ALFDDATV WLSPEEERAVLRGGGG FGDPFLVFYARRP
Sbjct:    1 MPHATAATTAVTPAPSAQS--RAAVLFGAENHPPVGSSSGVNRLRKRSRLCLGKRRRALPAQHAAVGQPSIGTAGSPSFQERFRSPFTSSAALAPPAEAIGYPWGASPGLSETCLDRAGVLAPAAWTIERPSSGPSPPFVGLKNLGETCYVNAVLQALTACHGVLTSSRGGGGGWHDVGSEGSEGSCSTPPAADAAPAGAASEGTAVLVAGVTGTQRNPVLAALEQVLGEMETRNRALSQQQLVAFGSQTAVSSPAEPESTGSGATSSPESKTCQPYDQTPLRPSASTGEGVLVEAIAPTFLVELIRGGWLSADRSRLGGGGAGATGSTEFGTGQACVSELLGKFLGLVVDDGGSGATSLGGVGG-RRSGGSHSSSFCCLAQAFRGTLCARTLCVECERDRTAREDFTELTLPPLLPPPQHAPPLTAQGAIPAAENDGGPSLRGRRRTMQTLVDGVFEGESLAGNNKLCDSGDVFYDLIGVILHQGQTLASGHYTFALHAAAGDSASFLEXXXXXXXXXXXXXXXXXXXXXXXXXG--STCGKPGFALFDDATVGWLSPEEERAVLRGGGGVFGDPFLVFYARRP 580

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BLAST of mRNA_Ecto-sp13_S_contig15355.4022.1 vs. uniprot
Match: A0A6H5L2L7_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L7_9PHAE)

HSP 1 Score: 523 bits (1348), Expect = 8.720e-177
Identity = 324/540 (60.00%), Postives = 335/540 (62.04%), Query Frame = 0

Query:  262 ALTSSHGGGGGWHDVGSEXXXXXXXXXXXXXXXXXXXXXAGTAVPVGGETGTQRDPVLIALEQVLGEMETRNRALFQQQLVAAGSETAVSPPAEPESTGSGATSSPESKTCQPYHQTPLRPSASTGEGVLVEAIAPTSLIELIRGGWLSADRARLGGGGAGAAGLTDFGTGQACVSELLGKFLGLVVDDRGSRPTSPGGVGGQRRSGGTHSSSLCGLAQAFRGTLCARTLCVECERDRTARENFTELTLPPLLPPQHAPPLTAQGAIPAAENDGGPSLRGRRRTMQTLVDGVFESESLAGNNK----------------------------------------------------------------------------------------------------------------------LSDSGGGFYDLIGAILHQGQTLASGHYTFARHAA--DSASFL-EQXXXXXXXXXXXXXXXXXXXXXXXXXXXSTCGKSSVALFDDATVRWLSPEEERAVLRGGGGGFGDPFLVFYARRP 680
            AL SS GGGGGWHDVGSE                     AGTA PVG ETGTQR+PVL+ALEQVLGEMETRNRALFQQQLVAAGS+TAVSPPAEPEST SGATSS ESKTCQ + QTPLRPSASTGEGV VE+IAPTSL+ELI GGWLSADRARLGGGGAG  G TDFGTGQACVSELLGKFLGLVVDD               RSGGTHSSS CGLAQAFRGTLCARTLCVECERDRTARE+FTELTLPPLLPPQHAPPLTAQ AIPAAENDGGPSLRGR RT+QTL+DGVFE ESLAGNNK                                                                                                                      L DSG  FYDLIGAILHQGQTLASGHYTFA +AA  D ASFL +QXXXXXXX                    ST GK   ALFDDATVRWLS EEERAVLRG GGGFGDPFLVFYARRP
Sbjct:    2 ALASSSGGGGGWHDVGSEGSEGVSSTPPAADAAPAGAALAGTAAPVGRETGTQRNPVLVALEQVLGEMETRNRALFQQQLVAAGSQTAVSPPAEPESTSSGATSSAESKTCQWFDQTPLRPSASTGEGVRVESIAPTSLVELIHGGWLSADRARLGGGGAGTTGSTDFGTGQACVSELLGKFLGLVVDDXXXXXXXXXXXX-XXRSGGTHSSSFCGLAQAFRGTLCARTLCVECERDRTAREDFTELTLPPLLPPQHAPPLTAQRAIPAAENDGGPSLRGRHRTIQTLIDGVFERESLAGNNKVWCEACRQWTEAERRSSVHSPPGLLALHVRPGTRKRSSPCLYPKALARASGGAPDSVVGDVRRGADGRLPAGSREEAIERTLVVRKAARCQFHGGGVNSXXXXXXXXXXXSVDSCTGQLCDSGDIFYDLIGAILHQGQTLASGHYTFAINAAAGDWASFLAQQXXXXXXXADRDNRALVQQGPPGATAAGSTYGKPDFALFDDATVRWLSLEEERAVLRGDGGGFGDPFLVFYARRP 540

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig15355.4022.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig15355.4022.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FM48_ECTSI	2.570e-310	84.79	USP domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5L2L7_9PHAE	8.720e-177	60.00	USP domain-containing protein n=1 Tax=Ectocarpus s...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 604..624
None	No IPR available	PANTHER	PTHR24006	FAMILY NOT NAMED	coord: 221..657
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..27
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..12
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 24..27
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 13..23
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 28..680
IPR038765	Papain-like cysteine peptidase superfamily	SUPERFAMILY	54001	Cysteine proteinases	coord: 235..260
IPR038765	Papain-like cysteine peptidase superfamily	SUPERFAMILY	54001	Cysteine proteinases	coord: 432..679

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig15355	contig	Ecto-sp13_S_contig15355:974..3376 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig15355.4022.1	mRNA_Ecto-sp13_S_contig15355.4022.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig15355 974..3376 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig15355.4022.1 ID=prot_Ecto-sp13_S_contig15355.4022.1|Name=mRNA_Ecto-sp13_S_contig15355.4022.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=681bp
MPRRYDTRSTTKASCSTAAAVAANAQAISNPTSGTAGHAAAEAALLAPPP
RISSQVVTGDGQQREILPAAAAAAAAALGATKRADSHLFPQVARKVPDMP
LATAATTAVPPAPSAQSPAAAAVLFGTENYPPVGASSGVDRLRKRSRLCL
GKHRRALPSQHAAVSQPSLGTAGSPSFQERFRSPYTSSAALAPPAEAIGY
PWGTSPGLSEGRIDRAGVLAPATWTIGRPSSGQSPPFVGLENLGETCYVN
AVLQALTACHGALTSSHGGGGGWHDVGSEGSEGSSSTPPAADAAPAGAAS
AGTAVPVGGETGTQRDPVLIALEQVLGEMETRNRALFQQQLVAAGSETAV
SPPAEPESTGSGATSSPESKTCQPYHQTPLRPSASTGEGVLVEAIAPTSL
IELIRGGWLSADRARLGGGGAGAAGLTDFGTGQACVSELLGKFLGLVVDD
RGSRPTSPGGVGGQRRSGGTHSSSLCGLAQAFRGTLCARTLCVECERDRT
ARENFTELTLPPLLPPQHAPPLTAQGAIPAAENDGGPSLRGRRRTMQTLV
DGVFESESLAGNNKLSDSGGGFYDLIGAILHQGQTLASGHYTFARHAADS
ASFLEQQQQQQQQADRDNRALEQQGPPGAAAAGSTCGKSSVALFDDATVR
WLSPEEERAVLRGGGGGFGDPFLVFYARRP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR038765	Papain-like_cys_pep_sf