prot_Ecto-sp13_S_contig15338.4012.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15338.4012.1
Unique Nameprot_Ecto-sp13_S_contig15338.4012.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length70
Homology
BLAST of mRNA_Ecto-sp13_S_contig15338.4012.1 vs. uniprot
Match: D7FN81_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN81_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 4.360e-38
Identity = 69/70 (98.57%), Postives = 70/70 (100.00%), Query Frame = 0
Query:    1 RYTAHTPLLDLRPLPTTALRNPKFESLYRYQHFNPIQTQLFHVLYHSDESVLLGAPTGSGKTAVAEIAIM 70
            RYTAHTPLLDLRPLPTTAL+NPKFESLYRYQHFNPIQTQLFHVLYHSDESVLLGAPTGSGKTAVAEIAIM
Sbjct: 1426 RYTAHTPLLDLRPLPTTALQNPKFESLYRYQHFNPIQTQLFHVLYHSDESVLLGAPTGSGKTAVAEIAIM 1495          
BLAST of mRNA_Ecto-sp13_S_contig15338.4012.1 vs. uniprot
Match: A0A7R8W5S6_9CRUS (Hypothetical protein n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8W5S6_9CRUS)

HSP 1 Score: 111 bits (278), Expect = 5.150e-27
Identity = 50/69 (72.46%), Postives = 61/69 (88.41%), Query Frame = 0
Query:    1 RYTAHTPLLDLRPLPTTALRNPKFESLYRYQHFNPIQTQLFHVLYHSDESVLLGAPTGSGKTAVAEIAI 69
            R+  HT LLDL+PLP TAL+NP+F+SLY++ HFNPIQTQ+FHVLYH+D +VLLGAPTGSGKT  AEIA+
Sbjct: 1298 RHPPHTELLDLQPLPVTALKNPEFQSLYKFTHFNPIQTQIFHVLYHTDHNVLLGAPTGSGKTIAAEIAM 1366          
BLAST of mRNA_Ecto-sp13_S_contig15338.4012.1 vs. uniprot
Match: A0A8C7XCK4_9TELE (Activating signal cointegrator 1 complex subunit 3 n=1 Tax=Oryzias sinensis TaxID=183150 RepID=A0A8C7XCK4_9TELE)

HSP 1 Score: 108 bits (271), Expect = 4.530e-26
Identity = 49/70 (70.00%), Postives = 60/70 (85.71%), Query Frame = 0
Query:    1 RYTAHTPLLDLRPLPTTALRNPKFESLYRYQHFNPIQTQLFHVLYHSDESVLLGAPTGSGKTAVAEIAIM 70
            R+  HT LLDL+PLP  ALRNP++ESLY++ HFNPIQTQ+FH LYH+D +VLLGAPTGSGKT  AE+AI+
Sbjct:  830 RHPPHTELLDLQPLPVIALRNPEYESLYKFTHFNPIQTQIFHTLYHTDTNVLLGAPTGSGKTIAAEMAIV 899          
BLAST of mRNA_Ecto-sp13_S_contig15338.4012.1 vs. uniprot
Match: A0A8C8DKB5_9TELE (Activating signal cointegrator 1 complex subunit 3 n=2 Tax=Oryzias sinensis TaxID=183150 RepID=A0A8C8DKB5_9TELE)

HSP 1 Score: 108 bits (271), Expect = 4.530e-26
Identity = 49/70 (70.00%), Postives = 60/70 (85.71%), Query Frame = 0
Query:    1 RYTAHTPLLDLRPLPTTALRNPKFESLYRYQHFNPIQTQLFHVLYHSDESVLLGAPTGSGKTAVAEIAIM 70
            R+  HT LLDL+PLP  ALRNP++ESLY++ HFNPIQTQ+FH LYH+D +VLLGAPTGSGKT  AE+AI+
Sbjct:  862 RHPPHTELLDLQPLPVIALRNPEYESLYKFTHFNPIQTQIFHTLYHTDTNVLLGAPTGSGKTIAAEMAIV 931          
BLAST of mRNA_Ecto-sp13_S_contig15338.4012.1 vs. uniprot
Match: A0A2I0IVT6_PUNGR (Uncharacterized protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0IVT6_PUNGR)

HSP 1 Score: 108 bits (270), Expect = 6.180e-26
Identity = 48/68 (70.59%), Postives = 59/68 (86.76%), Query Frame = 0
Query:    3 TAHTPLLDLRPLPTTALRNPKFESLYRYQHFNPIQTQLFHVLYHSDESVLLGAPTGSGKTAVAEIAIM 70
            T HT LLDL+PLP T+LRNP +ESLY++ HFNPIQTQ FH+LYH+D +VLLGAPTGSGKT  AE+A++
Sbjct:  647 TMHTELLDLKPLPVTSLRNPTYESLYKFSHFNPIQTQAFHILYHTDNNVLLGAPTGSGKTISAELAML 714          
BLAST of mRNA_Ecto-sp13_S_contig15338.4012.1 vs. uniprot
Match: A0A0A0LQL5_CUCSA (Uncharacterized protein n=1 Tax=Cucumis sativus TaxID=3659 RepID=A0A0A0LQL5_CUCSA)

HSP 1 Score: 108 bits (270), Expect = 6.180e-26
Identity = 48/69 (69.57%), Postives = 61/69 (88.41%), Query Frame = 0
Query:    2 YTAHTPLLDLRPLPTTALRNPKFESLYRYQHFNPIQTQLFHVLYHSDESVLLGAPTGSGKTAVAEIAIM 70
            +T+HT LLDL+PLP TAL N  +ESLY++ HFNPIQTQ+FHVLYHSD+++LLGAPTGSGKT  AE+A++
Sbjct: 1254 HTSHTELLDLKPLPITALGNRSYESLYKFSHFNPIQTQIFHVLYHSDDNILLGAPTGSGKTISAELAML 1322          
BLAST of mRNA_Ecto-sp13_S_contig15338.4012.1 vs. uniprot
Match: E9H7W7_DAPPU (Uncharacterized protein n=6 Tax=Daphnia TaxID=6668 RepID=E9H7W7_DAPPU)

HSP 1 Score: 108 bits (270), Expect = 6.190e-26
Identity = 50/69 (72.46%), Postives = 61/69 (88.41%), Query Frame = 0
Query:    1 RYTAHTPLLDLRPLPTTALRNPKFESLYRYQHFNPIQTQLFHVLYHSDESVLLGAPTGSGKTAVAEIAI 69
            R+  HT LLDL+PLP TAL+NP+++SLY + +FNPIQTQLFHVLYH+D +VLLGAPTGSGKT VAEIA+
Sbjct: 1029 RHPPHTGLLDLKPLPVTALKNPEWQSLYSFPYFNPIQTQLFHVLYHTDHNVLLGAPTGSGKTIVAEIAM 1097          
BLAST of mRNA_Ecto-sp13_S_contig15338.4012.1 vs. uniprot
Match: A0A218VXB9_PUNGR (Uncharacterized protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A218VXB9_PUNGR)

HSP 1 Score: 108 bits (270), Expect = 6.200e-26
Identity = 48/68 (70.59%), Postives = 59/68 (86.76%), Query Frame = 0
Query:    3 TAHTPLLDLRPLPTTALRNPKFESLYRYQHFNPIQTQLFHVLYHSDESVLLGAPTGSGKTAVAEIAIM 70
            T HT LLDL+PLP T+LRNP +ESLY++ HFNPIQTQ FH+LYH+D +VLLGAPTGSGKT  AE+A++
Sbjct: 1152 TMHTELLDLKPLPVTSLRNPTYESLYKFSHFNPIQTQAFHILYHTDNNVLLGAPTGSGKTISAELAML 1219          
BLAST of mRNA_Ecto-sp13_S_contig15338.4012.1 vs. uniprot
Match: A0A6P8ECM0_PUNGR (DExH-box ATP-dependent RNA helicase DExH14 isoform X1 n=2 Tax=Punica granatum TaxID=22663 RepID=A0A6P8ECM0_PUNGR)

HSP 1 Score: 108 bits (270), Expect = 6.200e-26
Identity = 48/68 (70.59%), Postives = 59/68 (86.76%), Query Frame = 0
Query:    3 TAHTPLLDLRPLPTTALRNPKFESLYRYQHFNPIQTQLFHVLYHSDESVLLGAPTGSGKTAVAEIAIM 70
            T HT LLDL+PLP T+LRNP +ESLY++ HFNPIQTQ FH+LYH+D +VLLGAPTGSGKT  AE+A++
Sbjct: 1261 TMHTELLDLKPLPVTSLRNPTYESLYKFSHFNPIQTQAFHILYHTDNNVLLGAPTGSGKTISAELAML 1328          
BLAST of mRNA_Ecto-sp13_S_contig15338.4012.1 vs. uniprot
Match: UPI001EE5E0DB (LOW QUALITY PROTEIN: activating signal cointegrator 1 complex subunit 3-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE5E0DB)

HSP 1 Score: 108 bits (269), Expect = 8.440e-26
Identity = 48/69 (69.57%), Postives = 60/69 (86.96%), Query Frame = 0
Query:    1 RYTAHTPLLDLRPLPTTALRNPKFESLYRYQHFNPIQTQLFHVLYHSDESVLLGAPTGSGKTAVAEIAI 69
            R+  HT LLDL+PLP TAL+NP++E+LYR+ HFNPIQTQ+FH +YH+D +VLLGAPTGSGKT  AE+AI
Sbjct: 1292 RHPPHTELLDLQPLPVTALKNPQYEALYRFTHFNPIQTQIFHTVYHNDCNVLLGAPTGSGKTVAAELAI 1360          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15338.4012.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN81_ECTSI4.360e-3898.57Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7R8W5S6_9CRUS5.150e-2772.46Hypothetical protein n=1 Tax=Cyprideis torosa TaxI... [more]
A0A8C7XCK4_9TELE4.530e-2670.00Activating signal cointegrator 1 complex subunit 3... [more]
A0A8C8DKB5_9TELE4.530e-2670.00Activating signal cointegrator 1 complex subunit 3... [more]
A0A2I0IVT6_PUNGR6.180e-2670.59Uncharacterized protein n=1 Tax=Punica granatum Ta... [more]
A0A0A0LQL5_CUCSA6.180e-2669.57Uncharacterized protein n=1 Tax=Cucumis sativus Ta... [more]
E9H7W7_DAPPU6.190e-2672.46Uncharacterized protein n=6 Tax=Daphnia TaxID=6668... [more]
A0A218VXB9_PUNGR6.200e-2670.59Uncharacterized protein n=1 Tax=Punica granatum Ta... [more]
A0A6P8ECM0_PUNGR6.200e-2670.59DExH-box ATP-dependent RNA helicase DExH14 isoform... [more]
UPI001EE5E0DB8.440e-2669.57LOW QUALITY PROTEIN: activating signal cointegrato... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 35..69
e-value: 7.3E-6
score: 25.9
NoneNo IPR availableGENE3D3.40.50.300coord: 1..70
e-value: 2.7E-23
score: 84.3
NoneNo IPR availablePANTHERPTHR24075:SF6ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 3coord: 3..70
NoneNo IPR availablePANTHERPTHR24075FAMILY NOT NAMEDcoord: 3..70
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15338contigEcto-sp13_S_contig15338:3084..3836 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15338.4012.1mRNA_Ecto-sp13_S_contig15338.4012.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15338 3084..3836 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15338.4012.1 ID=prot_Ecto-sp13_S_contig15338.4012.1|Name=mRNA_Ecto-sp13_S_contig15338.4012.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=70bp
RYTAHTPLLDLRPLPTTALRNPKFESLYRYQHFNPIQTQLFHVLYHSDES
VLLGAPTGSGKTAVAEIAIM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase