prot_Ecto-sp13_S_contig1523.3941.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1523.3941.1
Unique Nameprot_Ecto-sp13_S_contig1523.3941.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length696
Homology
BLAST of mRNA_Ecto-sp13_S_contig1523.3941.1 vs. uniprot
Match: A0A6H5K5B0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5B0_9PHAE)

HSP 1 Score: 976 bits (2523), Expect = 0.000e+0
Identity = 602/715 (84.20%), Postives = 615/715 (86.01%), Query Frame = 0
Query:    1 MPARKVTAAATKRKSPGDHPQSPRSKAKKRLVQGDSNHAAAAPDGASSKPVVSRVHKFIVGLAVQLTSTCDDEEVDVDVQVEGLFRAALGALPAGKLKAELMQDEAAAMKTLAAEVASIRFKQXXXXXXXQEGGEIATEKDAGVAAACALVPCTAQLYRQARATAEKQSRGIDGAATDNKPLRALALSPRAPLDLLVNAMRSTSKLDGAAAPVSTTLDATVLGLRNLVGALAADPLAAMSPSGLAFFADRAAVLASSAARSLVARRG----GDSITGDKAALEAEALGLMLRILQVAGLALSAAGSG----------------SSRPADPASWLLLPCAPETSSAWNGEVAATPSDGSLGAPPRNEVDSTPPARISVARLLAHYAASVAACSVGRKAVVKAAQAXXXXXXXXXXXXXXXXXXXGEEEAGDCPDNNKSNNISLSRHLSALCAANLAGSEPGTLEFLRCVGDAVFATDDGGDVSLAARLAPACGRALARLRRPAASPAPTASQFLRRAYAFRVAETLNRSARAASLSSSKPLSRKEAIAPTAIAGRGSGGCASNGSGGGATAVWDFVGDSSAPPALLEFLGRPEAPAAVGQGDAAXXXXXXXXXXXXXXXXXXELLRSSPACAPAALGPLLSAMERLQGGEEGXXXXXXXX-AVGVGGFFVDTGGAVGGTESVILARLGNGAGVAADMDEEEVASVASSAVSDSDGN 694
            MPARKV  A TKRKSPGDHP SPRSKAKKRL+QGDSNHAAAA DGASSKP VSR HKFIVGLAVQLTSTCDDEEVDVDVQVEGLFRAAL ALPAGKLKAELMQ+EAAAMKTLAAEV+SIR KQXXXXXX Q+GGE+AT KDAGVAAACALVPCTAQLYRQARATAEKQSRGIDG ATDNKPLRALALSPRAPLDLLVNAM STSKLDGAAAPVSTTLDA V+ LRNLVGALAADPLAAMSPSGLAFFADRAAVLASSA+RSLVARRG    GDSITGDKA LE EALGLMLRILQVAGLALSAAG G                S RPADPASWLLLPC+PETSSAWNGEVAATPSD S GAPPRNEVDSTPPA+ISVARLLAHYAASVAACSVGRKAVVKAAQ               XXXXX     GD PDN KSNNIS+SRHLSALCAANLAGSEPGTLEFLRCVGDAVFATDDGGDVSLAA LAPACGRALARLRRPAASPAPTA+QFLRRAYAFRVAE LNRSARAASLS SKP SRKEAIAPTAIAGRGS GCAS+       A WDFVGDSSAPPALLEFLGR EAPAAVGQG A XXXXXXXXXXXXXXXXXX LLRSSPACAPAALGPLLSAMERLQGGEEG         AVGVGGFFVDTG    G ESV+LARLGNG  V  DMDEEEVASVASS VS SDGN
Sbjct:    1 MPARKVAVATTKRKSPGDHPPSPRSKAKKRLIQGDSNHAAAAVDGASSKPAVSRAHKFIVGLAVQLTSTCDDEEVDVDVQVEGLFRAALSALPAGKLKAELMQNEAAAMKTLAAEVSSIRSKQXXXXXXPQKGGEVATGKDAGVAAACALVPCTAQLYRQARATAEKQSRGIDGTATDNKPLRALALSPRAPLDLLVNAMGSTSKLDGAAAPVSTTLDAAVICLRNLVGALAADPLAAMSPSGLAFFADRAAVLASSASRSLVARRGDSRGGDSITGDKAGLEVEALGLMLRILQVAGLALSAAGGGTTASGLLRATDDGGCGSCRPADPASWLLLPCSPETSSAWNGEVAATPSDSSPGAPPRNEVDSTPPAQISVARLLAHYAASVAACSVGRKAVVKAAQVAATGEGREGSDDESXXXXXXXXXTGDGPDNKKSNNISVSRHLSALCAANLAGSEPGTLEFLRCVGDAVFATDDGGDVSLAAPLAPACGRALARLRRPAASPAPTAAQFLRRAYAFRVAEALNRSARAASLSLSKPPSRKEAIAPTAIAGRGSSGCASSXXXXXXAAEWDFVGDSSAPPALLEFLGRSEAPAAVGQGSAXXXXXXXXXXXXXXXXXXXXLLRSSPACAPAALGPLLSAMERLQGGEEGGGKTAAAATAVGVGGFFVDTGEMAEGAESVVLARLGNGTDVVPDMDEEEVASVASSTVSGSDGN 715          
BLAST of mRNA_Ecto-sp13_S_contig1523.3941.1 vs. uniprot
Match: D7FPB3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPB3_ECTSI)

HSP 1 Score: 969 bits (2506), Expect = 0.000e+0
Identity = 619/720 (85.97%), Postives = 634/720 (88.06%), Query Frame = 0
Query:    1 MPARKVTAAATKRKSPGDHPQSPRSKAKKRLVQGDSNHAAAAPDGASSKPVVSRVHKFIVGLAVQLTSTCDDEEVDVDVQVEGLFRAALGALPAGKLKAELMQDEAAAMKTLAAEVASIRFKQXXXXXXXQEGGEIATEKDAGVAAACALVPCTAQLYRQARATAEKQSRGIDGAATDNKPLRALALSPRAPLDLLVNAMRSTSKLDGAAAPVSTTLDATVLGLRNLVGALAADPLAAMSPSGLAFFADRAAVLASSAARSLVA----RRGGDSITGDKAALEAEALGLMLRILQVAGLALSAA----------------GSGSSRPADPASWLLLPCAPETSSAWNGEVAATPSDGSLGAPPRNEVDSTPPARISVARLLAHYAASVAACSVGRKAVVKAAQAXXXXXXXXXXXXXXXXXXXGEEEAGDCPDNNKSNNISLSRHLSALCAANLAGSEPGTLEFLRCVGDAVFATDDGGDVSLAARLAPACGRALARLRRPAASPAPTASQFLRRAYAFRVAETLNRSARAASLSSSKPLSRKEAIAPTAIAGRGSGGCASNGSGGGATA----VWDFVGDSSAPPALLEFLGRPEAPAAVGQGDAAXXXXXXXXXXXXXXXXXXELLRSSPACAPAALGPLLSAMERLQG-GEEGXXXXXXXXAVGVGGFFVDTGGAVGGTESVILARLGNGAGVAADMDEEEVASVASSAVSDSDGNE 695
            MPARKVT AATKRKSPG HP SPRSKAKKRL+QGDSNHAAAAPD ASSKP VSR HKFIVGLAVQLTSTCDDEEVDVDVQVEGLFRAALGALPAGKLKAEL+QDEAA MKTLAAEVASIR KQ       Q GGE+AT KDAGVAAACALVPCTAQLYRQARA AEKQSRGIDGAATDNKPLRALALSPRAPLDLL NAM STSKLDGAAAPVSTTLDA V+ LR+LVGALAADPLAAMSPSGLAFFADRAAVLASSAARSLVA     RGGDS+TGDKAALE EALGLMLRILQVAGLALSAA                GSG  RPADPASWLLLPCAPET SAWNGEV+AT  D SLG  PRNEVDSTPPARISVARLLAHYAASVAACSVGRKAVVKAAQAXXXXXXXXXXXXXXXXXXX     GD PD+NKSNNI+LSRHLSALCAANLAGSEPGTLEFLRCVGDAVFATDD G+VSLAA LAPACGRALARLRRPAA+PAPTA+QFLRRAYAFRV ETLNRSARAASLSSSKP SRKEAIAPTAIAGRGS GCA +GS           WDFVGDSSAPPALLEFLGRPEAPAAVGQGDAAXXXXXXXXXXXXXXXXXXELLRSSPACAPAALGPLLSAMERLQG GE GXXXXXXXX     GFFVDTGGA GG  SV+LARLGNGAG+ ADMDEEEVASVASSAVSDSDGNE
Sbjct:    1 MPARKVTEAATKRKSPGGHPPSPRSKAKKRLIQGDSNHAAAAPDCASSKPAVSRAHKFIVGLAVQLTSTCDDEEVDVDVQVEGLFRAALGALPAGKLKAELVQDEAATMKTLAAEVASIRSKQQQS----QNGGEVATGKDAGVAAACALVPCTAQLYRQARAIAEKQSRGIDGAATDNKPLRALALSPRAPLDLLANAMGSTSKLDGAAAPVSTTLDAAVISLRDLVGALAADPLAAMSPSGLAFFADRAAVLASSAARSLVAGRGDTRGGDSVTGDKAALEVEALGLMLRILQVAGLALSAAAGGNTASGLLRATDDAGSGGCRPADPASWLLLPCAPETPSAWNGEVSATSLDSSLGTLPRNEVDSTPPARISVARLLAHYAASVAACSVGRKAVVKAAQAXXXXXXXXXXXXXXXXXXXXXXXTGDGPDSNKSNNIALSRHLSALCAANLAGSEPGTLEFLRCVGDAVFATDDVGNVSLAAPLAPACGRALARLRRPAATPAPTAAQFLRRAYAFRVTETLNRSARAASLSSSKPPSRKEAIAPTAIAGRGSSGCARSGSXXXXXXXXXXAWDFVGDSSAPPALLEFLGRPEAPAAVGQGDAAXXXXXXXXXXXXXXXXXXELLRSSPACAPAALGPLLSAMERLQGVGEGGXXXXXXXXXXXXXGFFVDTGGAAGGARSVVLARLGNGAGIVADMDEEEVASVASSAVSDSDGNE 716          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1523.3941.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K5B0_9PHAE0.000e+084.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPB3_ECTSI0.000e+085.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1523contigEcto-sp13_S_contig1523:10118..13407 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1523.3941.1mRNA_Ecto-sp13_S_contig1523.3941.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1523 10118..13407 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1523.3941.1 ID=prot_Ecto-sp13_S_contig1523.3941.1|Name=mRNA_Ecto-sp13_S_contig1523.3941.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=696bp
MPARKVTAAATKRKSPGDHPQSPRSKAKKRLVQGDSNHAAAAPDGASSKP
VVSRVHKFIVGLAVQLTSTCDDEEVDVDVQVEGLFRAALGALPAGKLKAE
LMQDEAAAMKTLAAEVASIRFKQQQQQQPPQEGGEIATEKDAGVAAACAL
VPCTAQLYRQARATAEKQSRGIDGAATDNKPLRALALSPRAPLDLLVNAM
RSTSKLDGAAAPVSTTLDATVLGLRNLVGALAADPLAAMSPSGLAFFADR
AAVLASSAARSLVARRGGDSITGDKAALEAEALGLMLRILQVAGLALSAA
GSGSSRPADPASWLLLPCAPETSSAWNGEVAATPSDGSLGAPPRNEVDST
PPARISVARLLAHYAASVAACSVGRKAVVKAAQAAATGGGIEGSDDEGSS
ESDGEEEAGDCPDNNKSNNISLSRHLSALCAANLAGSEPGTLEFLRCVGD
AVFATDDGGDVSLAARLAPACGRALARLRRPAASPAPTASQFLRRAYAFR
VAETLNRSARAASLSSSKPLSRKEAIAPTAIAGRGSGGCASNGSGGGATA
VWDFVGDSSAPPALLEFLGRPEAPAAVGQGDAAQPALKELASRRNSPAAV
AELLRSSPACAPAALGPLLSAMERLQGGEEGGGKTAAAAAVGVGGFFVDT
GGAVGGTESVILARLGNGAGVAADMDEEEVASVASSAVSDSDGNE*
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