prot_Ecto-sp13_S_contig1523.3939.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1523.3939.1
Unique Nameprot_Ecto-sp13_S_contig1523.3939.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length104
Homology
BLAST of mRNA_Ecto-sp13_S_contig1523.3939.1 vs. uniprot
Match: D7FPB1_ECTSI (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPB1_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 3.600e-67
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
Query:    1 MFSRVVSLMVCMLAGAAAFMAPSVTVRSVSRPTNSLSMADVTFPGGKKTKANGGAPLKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKIRLCIGKLPAGAGPFT 104
            MFSRVVSLMVCMLAGAAAFMAPSVTVRSVSRPTNSLSMADVTFPGGKKTKANGGAPLKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKIRLCIGKLPAGAGPFT
Sbjct:    1 MFSRVVSLMVCMLAGAAAFMAPSVTVRSVSRPTNSLSMADVTFPGGKKTKANGGAPLKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKIRLCIGKLPAGAGPFT 104          
BLAST of mRNA_Ecto-sp13_S_contig1523.3939.1 vs. uniprot
Match: A0A835ZB30_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB30_9STRA)

HSP 1 Score: 102 bits (253), Expect = 4.950e-26
Identity = 49/77 (63.64%), Postives = 54/77 (70.13%), Query Frame = 0
Query:   28 SVSRPTNSLSMADVTFPGGKKTKANGGAPLKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKIRLCIGKLPAGAGPFT 104
            SV R  +SL MA   FPGGKK +   G  LK V  KA Y A YGCEEGKCG+CEHKV GKK+RLCIGK+P G GP T
Sbjct:   28 SVVRAPSSLYMAQCIFPGGKKAEGKPGEALKAVVAKAKYDAPYGCEEGKCGSCEHKVGGKKVRLCIGKVPPGNGPHT 104          
BLAST of mRNA_Ecto-sp13_S_contig1523.3939.1 vs. uniprot
Match: A0A7R9UCS5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCS5_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 4.000e-20
Identity = 43/88 (48.86%), Postives = 57/88 (64.77%), Query Frame = 0
Query:   18 AFMAPS-VTVRSVSRPTNSLSM-ADVTFPGGKKTKANGGAPLKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKIRLCIGKLPAGAGPF 103
            AF+ P  +  R+ ++    +SM  +V FPGGKKT A  G P K VA +AG+K  YGC++G CG CE KVNGKK+R C+ K+PA   P 
Sbjct:   42 AFLPPKGLATRAPAQQRGQMSMNIEVVFPGGKKTTAKAGEPFKNVAARAGFKPTYGCKQGSCGACEIKVNGKKVRPCVAKVPASNKPL 129          
BLAST of mRNA_Ecto-sp13_S_contig1523.3939.1 vs. uniprot
Match: A0A4D9CYU4_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYU4_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 3.190e-17
Identity = 49/107 (45.79%), Postives = 64/107 (59.81%), Query Frame = 0
Query:    1 MFSRVVSLMVCMLAGAAAFMAPSVTVRSVSR--PTNSLSMADVTFPGGKKTKANGGAPLKTVAQKAGYKAAYGCEEGKCGTCEHK-VNGKKIRLCIGKLPAGAGPFT 104
            M  R+V  ++ ++A   AF AP      + R  P  +  + +V +PG KK KA  G  LK VA +A Y   YGCEEGKCG+CEHK  +GKK R+CI K+P  AGP T
Sbjct:    1 MMLRIVQALILLMA-TTAFFAPHAPSAGIKRGGPVYNGDV-EVIWPGNKKVKAKPGEALKAVAARARYTPNYGCEEGKCGSCEHKGSDGKKYRVCITKVPKIAGPLT 105          
BLAST of mRNA_Ecto-sp13_S_contig1523.3939.1 vs. uniprot
Match: A0A2D5MUZ7_9BACT (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2D5MUZ7_9BACT)

HSP 1 Score: 54.3 bits (129), Expect = 2.070e-7
Identity = 21/43 (48.84%), Postives = 29/43 (67.44%), Query Frame = 0
Query:   56 PLKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKIRLCIGKLPA 98
            PLK + + AG    + CE GKCGTCE++V+G+  RLC   +PA
Sbjct:   45 PLKKIVKAAGAPVKFNCENGKCGTCENRVDGRLTRLCTATVPA 87          
BLAST of mRNA_Ecto-sp13_S_contig1523.3939.1 vs. uniprot
Match: B8C2R5_THAPS (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C2R5_THAPS)

HSP 1 Score: 53.1 bits (126), Expect = 1.400e-6
Identity = 20/43 (46.51%), Postives = 28/43 (65.12%), Query Frame = 0
Query:   57 LKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKIRLCIGKLPAG 99
            +  V   A  K  Y C+ G+CGTC  K+NG+KIR C+ K+P+G
Sbjct:   89 ISQVCNAARVKVPYNCQNGECGTCTVKMNGRKIRACVSKVPSG 131          
BLAST of mRNA_Ecto-sp13_S_contig1523.3939.1 vs. uniprot
Match: A0A7S4IHS5_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4IHS5_9EUKA)

HSP 1 Score: 52.8 bits (125), Expect = 2.830e-6
Identity = 26/65 (40.00%), Postives = 42/65 (64.62%), Query Frame = 0
Query:   40 DVTFP--GGKKTKANGGAPLKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKK-IRLCIG-KLPAGA 100
            +VTFP  G K  KA  G P+  V ++AG +  + C+ G+CGTC+ ++NG+  +++C G  +P GA
Sbjct:   85 EVTFPQKGNKVVKAKQGEPIGAVCKRAGVRVKFDCKNGRCGTCQVRLNGRSALKVCQGGTVPGGA 149          
BLAST of mRNA_Ecto-sp13_S_contig1523.3939.1 vs. uniprot
Match: R1D5J6_EMIHU (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D5J6_EMIHU)

HSP 1 Score: 48.9 bits (115), Expect = 2.860e-5
Identity = 19/44 (43.18%), Postives = 28/44 (63.64%), Query Frame = 0
Query:   54 GAPLKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKIRLCIGKLP 97
            G  L+ VA+ AG    Y C EG C TC+ K+ G  +++C+GK+P
Sbjct:   48 GQKLRDVARAAGIPIKYSCNEGTCKTCQVKMGGGMVKVCVGKVP 91          
BLAST of mRNA_Ecto-sp13_S_contig1523.3939.1 vs. uniprot
Match: A0A7S1VCI6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VCI6_9STRA)

HSP 1 Score: 49.7 bits (117), Expect = 2.960e-5
Identity = 24/56 (42.86%), Postives = 34/56 (60.71%), Query Frame = 0
Query:   46 GKKTKANGGAPLKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKIRLCIGKLPAGAG 101
            GK  KA  G  +K VA  A  K +Y C++G CGTC  K+NG+K++ C  ++  G G
Sbjct:   79 GKPAKAVVGQSVKVVANAARVKISYDCQQGDCGTCMIKMNGRKVKAC--QMSIGTG 132          
BLAST of mRNA_Ecto-sp13_S_contig1523.3939.1 vs. uniprot
Match: A0A6U3ZFR1_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3ZFR1_9STRA)

HSP 1 Score: 49.7 bits (117), Expect = 3.010e-5
Identity = 19/48 (39.58%), Postives = 27/48 (56.25%), Query Frame = 0
Query:   57 LKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKIRLCIGKLPAGAGPFT 104
            +  V   A  K  Y C+ G CGTC  K+NG++ + C+ K+PAG    T
Sbjct:   90 ISQVCASARVKVPYNCQNGDCGTCMVKINGRQAKACVSKVPAGKCAIT 137          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1523.3939.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D7FPB1_ECTSI3.600e-67100.002Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A835ZB30_9STRA4.950e-2663.642Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7R9UCS5_9STRA4.000e-2048.86Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A4D9CYU4_9STRA3.190e-1745.792Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A2D5MUZ7_9BACT2.070e-748.842Fe-2S ferredoxin-type domain-containing protein n... [more]
B8C2R5_THAPS1.400e-646.512Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S4IHS5_9EUKA2.830e-640.00Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
R1D5J6_EMIHU2.860e-543.182Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S1VCI6_9STRA2.960e-542.86Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A6U3ZFR1_9STRA3.010e-539.58Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 22..95
e-value: 2.6E-7
score: 32.2
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 50..88
e-value: 5.8E-6
score: 26.2
IPR0060582Fe-2S ferredoxin, iron-sulphur binding sitePROSITEPS001972FE2S_FER_1coord: 72..80
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..104
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.789
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 35..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1523contigEcto-sp13_S_contig1523:128..2793 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1523.3939.1mRNA_Ecto-sp13_S_contig1523.3939.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1523 128..2793 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1523.3939.1 ID=prot_Ecto-sp13_S_contig1523.3939.1|Name=mRNA_Ecto-sp13_S_contig1523.3939.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=104bp
MFSRVVSLMVCMLAGAAAFMAPSVTVRSVSRPTNSLSMADVTFPGGKKTK
ANGGAPLKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKIRLCIGKLPAGA
GPFT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012675Beta-grasp_dom_sf
IPR0010412Fe-2S_ferredoxin-type
IPR0060582Fe2S_fd_BS
IPR0360102Fe-2S_ferredoxin-like_sf