prot_Ecto-sp13_S_contig15172.3901.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig15172.3901.1
Unique Name	prot_Ecto-sp13_S_contig15172.3901.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	185

Homology

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BLAST of mRNA_Ecto-sp13_S_contig15172.3901.1 vs. uniprot
Match: D7FX76_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX76_ECTSI)

HSP 1 Score: 301 bits (770), Expect = 1.510e-99
Identity = 151/170 (88.82%), Postives = 157/170 (92.35%), Query Frame = 0

Query:   20 MARRRHRAGPVRFVSSTAWFVGALVLLLRRSAWEGGVAAQQDNDDG----STSAPAALYPDCEADMALVGDSLCDLGFNVAECGFDGGDCCECTCVDTGDQVCGEGGGGYFCVDPDAPQDCASAPSPTPNTPSSPTTSSDAVGVTAGPTSLDASDDPYPGCGGYIPHIGE 185
            MARRR RAGPVRFV+S AWFVGALVLLLRRSAWEGGVAAQ+D+DDG    STSAP ALYPDCEADMALVGDSLCD   NVAECGFDGGDCCECTCVDTGDQVCGEGG GYFCVDPDAPQDCAS+PSPTPNTPSSPT SSDA+ VTAGPTSLDASDDPYPGCGGYIPHIG+
Sbjct:    1 MARRRRRAGPVRFVASRAWFVGALVLLLRRSAWEGGVAAQEDSDDGNDGGSTSAPTALYPDCEADMALVGDSLCDFDVNVAECGFDGGDCCECTCVDTGDQVCGEGGTGYFCVDPDAPQDCASSPSPTPNTPSSPT-SSDAIDVTAGPTSLDASDDPYPGCGGYIPHIGD 169

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BLAST of mRNA_Ecto-sp13_S_contig15172.3901.1 vs. uniprot
Match: A0A6H5JVP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVP4_9PHAE)

HSP 1 Score: 301 bits (770), Expect = 3.050e-97
Identity = 151/172 (87.79%), Postives = 156/172 (90.70%), Query Frame = 0

Query:   20 MARRRHRAGPVRFVSSTAWFVGALVLLLRRSAWEGGVAAQQD------NDDGSTSAPAALYPDCEADMALVGDSLCDLGFNVAECGFDGGDCCECTCVDTGDQVCGEGGGGYFCVDPDAPQDCASAPSPTPNTPSSPTTSSDAVGVTAGPTSLDASDDPYPGCGGYIPHIGE 185
            MARRRHRAGPVRFV+S AW VGALVLLLRRSAWE GV AQQ       NDDG TSAPAALYPDCEAD ALVGDS+CDL FNVAECGFDGGDCCECTCVDTGDQVCGEGGGGYFCVDPDAPQDCASAPSPTPNTPS+PT SSDA+ VTAGPTSLDASDDPYPGCGGYIPHIG+
Sbjct:    1 MARRRHRAGPVRFVASRAWCVGALVLLLRRSAWESGVVAQQGSDDGNGNDDGGTSAPAALYPDCEADTALVGDSICDLDFNVAECGFDGGDCCECTCVDTGDQVCGEGGGGYFCVDPDAPQDCASAPSPTPNTPSAPT-SSDAIDVTAGPTSLDASDDPYPGCGGYIPHIGD 171

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BLAST of mRNA_Ecto-sp13_S_contig15172.3901.1 vs. uniprot
Match: A0A6H5J6K0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6K0_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 5.670e-13
Identity = 55/129 (42.64%), Postives = 64/129 (49.61%), Query Frame = 0

Query:   62 NDDGSTSAPAAL--YPDCEADMALVGDSLCDLGFNVAECGFDGGDCCECTCVDT---GDQVCGEGGGGYFCVDPDAPQDCASAPSPTPNTPSSPTTSSDAVGVTAGPTSLDASDDPYPGCGGYIPHIGE 185
            +D G T +PAA   YPDCE  +    D +CD   N A CG+DGGDCC CTC D    G   CG  G  Y C+DPDAP  C S  SPTP    SP   +D                 +P C GYI  IG+
Sbjct:  128 DDCGVTPSPAAAIGYPDCEEYLYEWQDGVCDDNLNTAACGYDGGDCCRCTCRDYSSWGYSTCGYYG--YDCMDPDAPSAC-STDSPTP----SPAAGTD-----------------WPECEGYIYMIGD 232

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BLAST of mRNA_Ecto-sp13_S_contig15172.3901.1 vs. uniprot
Match: D7FX77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX77_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 5.680e-13
Identity = 55/130 (42.31%), Postives = 64/130 (49.23%), Query Frame = 0

Query:   62 NDDGSTSAPAAL--YPDCEADMALVGDSLCDLGFNVAECGFDGGDCCECTCVDTGD----QVCGEGGGGYFCVDPDAPQDCASAPSPTPNTPSSPTTSSDAVGVTAGPTSLDASDDPYPGCGGYIPHIGE 185
            +D G T +PAA   YPDCE  +    D +CD   N AECG+DGGDCC CTC D         CG  G  Y C+DPDAP  C S  SPTP    SP   +D                 +P C GYI  IG+
Sbjct:  128 DDCGVTPSPAAAIGYPDCEEYLYEWQDGVCDDNLNTAECGYDGGDCCRCTCRDYNSWGYYTNCGYYG--YDCMDPDAPSSC-STDSPTP----SPAAGTD-----------------WPECEGYIYMIGD 233

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BLAST of mRNA_Ecto-sp13_S_contig15172.3901.1 vs. uniprot
Match: A0A6H5L262_9PHAE (LNR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L262_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 2.740e-12
Identity = 32/53 (60.38%), Postives = 36/53 (67.92%), Query Frame = 0

Query:   80 DMALVGDSLCDLGFNVAECGFDGGDCCECTCVDTGDQVCGEGGGGYFCVDPDA 132
            D + VGD  CD   N AECG+DGGDCCECTCV  G+  CG GG  Y C+DP A
Sbjct:   43 DESAVGDGNCDRDINFAECGYDGGDCCECTCVAEGEYECGAGG--YACIDPAA 93

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BLAST of mRNA_Ecto-sp13_S_contig15172.3901.1 vs. uniprot
Match: D7G9A3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A3_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 1.760e-10
Identity = 37/76 (48.68%), Postives = 42/76 (55.26%), Query Frame = 0

Query:   73 LYPDCEADMALVGDSLCDLGFN-VAECGFDGGDCCECTCVDTGDQVCGEGGGGYFCVD---PDAPQDCASAPSPTP 144
            LYPDCE ++ L+GD  CD   N + ECGFDGGDCCEC CV   D    E    Y CV     D    C   P+PTP
Sbjct:    4 LYPDCEGELDLIGDGYCDDATNNLEECGFDGGDCCECDCVIPADAS--EDQLAYSCVQFSCDDTSSACYVVPAPTP 77

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BLAST of mRNA_Ecto-sp13_S_contig15172.3901.1 vs. uniprot
Match: A0A6H5JX54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX54_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 4.320e-10
Identity = 34/76 (44.74%), Postives = 44/76 (57.89%), Query Frame = 0

Query:   73 LYPDCEA---DMALVGDSLCDLGFNVAECGFDGGDCCECTCVDTGDQVCGEGGGGYFCVDPDAPQDCAS-APSPTP 144
            LYPDC +    +  +G+  C  G N  ECG+DGGDCCEC C  T +  CG  G  Y C DP +P +C    P+P+P
Sbjct:  209 LYPDCVSRGGTLEWIGNGACYWGNNFEECGYDGGDCCECDCESTLESHCGVNG--YDCADPSSPSECTEDVPTPSP 282

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BLAST of mRNA_Ecto-sp13_S_contig15172.3901.1 vs. uniprot
Match: A0A6H5K995_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K995_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 1.020e-9
Identity = 51/116 (43.97%), Postives = 56/116 (48.28%), Query Frame = 0

Query:   34 SSTAWFVGALVLLLRRSAWEGGVAAQQDNDDGSTSAPAA-LYPDCEADMALVGDSLCDLGFN-VAECGFDGGDCCECTCVDTGDQVCGEGGGGYFCVD---PDAPQDCASAPSPTP 144
            S   W V ALV L   SA  G VA        STS     LYPDCE ++  +GD  CD   N + ECGFDGGDCCEC CV   D    E    Y CV     D    C   P+PTP
Sbjct:    8 SRARWAVVALVAL---SAGCGRVATAT-----STSVDLIDLYPDCEGELDHIGDGYCDDATNNLEECGFDGGDCCECDCVVPADAS--EDQLAYSCVQFSCDDTSSACYVVPAPTP 113

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BLAST of mRNA_Ecto-sp13_S_contig15172.3901.1 vs. uniprot
Match: D8LEP6_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP6_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 3.170e-9
Identity = 29/49 (59.18%), Postives = 37/49 (75.51%), Query Frame = 0

Query:   84 VGDSLCDLGFNVAECGFDGGDCCECTCVDTGDQVCGEGGGGYFCVDPDA 132
            +G+  C++G N+ ECGFDGGDCCECTC D G+  CG+  G Y C+DPDA
Sbjct:   98 IGNGRCNMGNNIEECGFDGGDCCECTCED-GEYTCGQYYG-YACIDPDA 144

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BLAST of mRNA_Ecto-sp13_S_contig15172.3901.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 4.820e-9
Identity = 32/56 (57.14%), Postives = 37/56 (66.07%), Query Frame = 0

Query:   82 ALVGDSLCDLGFNVAECGFDGGDCCECTCVDT--GDQ--VCGEGGGGYFCVDPDAP 133
            AL GD  C    N AECG+DGGDCCECTC +   GD   +C + G G+ CVDPDAP
Sbjct:   34 ALYGDGYCTPPNNNAECGYDGGDCCECTCQNPQGGDHHWICSKNGSGFACVDPDAP 89

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig15172.3901.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig15172.3901.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FX76_ECTSI	1.510e-99	88.82	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JVP4_9PHAE	3.050e-97	87.79	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5J6K0_9PHAE	5.670e-13	42.64	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FX77_ECTSI	5.680e-13	42.31	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L262_9PHAE	2.740e-12	60.38	LNR domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D7G9A3_ECTSI	1.760e-10	48.68	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JX54_9PHAE	4.320e-10	44.74	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K995_9PHAE	1.020e-9	43.97	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LEP6_ECTSI	3.170e-9	59.18	Uncharacterized protein n=3 Tax=Ectocarpus silicul...	[more]
D7G4F9_ECTSI	4.820e-9	57.14	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 52..185
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 48..51
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..51
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..35
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 36..47
None	No IPR available	TMHMM	TMhelix		coord: 30..47

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig15172	contig	Ecto-sp13_S_contig15172:100..1008 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig15172.3901.1	mRNA_Ecto-sp13_S_contig15172.3901.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig15172 100..1008 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig15172.3901.1 ID=prot_Ecto-sp13_S_contig15172.3901.1|Name=mRNA_Ecto-sp13_S_contig15172.3901.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=185bp
MKMGTRRAVRRPRPGSPGPMARRRHRAGPVRFVSSTAWFVGALVLLLRRS
AWEGGVAAQQDNDDGSTSAPAALYPDCEADMALVGDSLCDLGFNVAECGF
DGGDCCECTCVDTGDQVCGEGGGGYFCVDPDAPQDCASAPSPTPNTPSSP
TTSSDAVGVTAGPTSLDASDDPYPGCGGYIPHIGE