prot_Ecto-sp13_S_contig15034.3805.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15034.3805.1
Unique Nameprot_Ecto-sp13_S_contig15034.3805.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length78
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig15034.3805.1 vs. uniprot
Match: A0A1Q5SPN9_9EURO (Uncharacterized protein n=1 Tax=Penicillium subrubescens TaxID=1316194 RepID=A0A1Q5SPN9_9EURO)

HSP 1 Score: 62.8 bits (151), Expect = 1.090e-9
Identity = 30/57 (52.63%), Postives = 35/57 (61.40%), Query Frame = 0 
Query:    6 GKTLKYGRARSIMCLEDLEVILCPLCSLALLLFWRFDVLKEEVPDFTDRTKWYRERV 62
            GKTL+ GR      L   + +LCPL SLAL LFWRFD+  E  PDF  R  WYR R+
Sbjct:  296 GKTLEAGRTDYTGILRHRDPVLCPLASLALYLFWRFDMAGEPPPDFNSRRSWYRRRL 352
[Close]
BLAST of mRNA_Ecto-sp13_S_contig15034.3805.1 vs. uniprot
Match: D7FXC9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXC9_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 4.420e-8
Identity = 26/33 (78.79%), Postives = 30/33 (90.91%), Query Frame = 0 
Query:   45 KEEVPDFTDRTKWYRERVFTFADGGGEYTAKDQ 77
            +++ P FTDRTKWYRERVFTFADGG EYTAKD+
Sbjct:   81 RKKSPTFTDRTKWYRERVFTFADGG-EYTAKDE 112
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15034.3805.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A1Q5SPN9_9EURO1.090e-952.63Uncharacterized protein n=1 Tax=Penicillium subrub... [more]
D7FXC9_ECTSI4.420e-878.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031872Ndc10, domain 2PFAMPF16787NDC10_IIcoord: 4..59
e-value: 5.1E-9
score: 35.6
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 42..77
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 23..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15034contigEcto-sp13_S_contig15034:3529..3762 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15034.3805.1mRNA_Ecto-sp13_S_contig15034.3805.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15034 3529..3762 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15034.3805.1 ID=prot_Ecto-sp13_S_contig15034.3805.1|Name=mRNA_Ecto-sp13_S_contig15034.3805.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=78bp
MGTRTGKTLKYGRARSIMCLEDLEVILCPLCSLALLLFWRFDVLKEEVPD
FTDRTKWYRERVFTFADGGGEYTAKDQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031872NDC10_II