prot_Ecto-sp13_S_contig1502.3797.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1502.3797.1
Unique Nameprot_Ecto-sp13_S_contig1502.3797.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length249
Homology
BLAST of mRNA_Ecto-sp13_S_contig1502.3797.1 vs. uniprot
Match: A0A6H5JK11_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JK11_9PHAE)

HSP 1 Score: 388 bits (997), Expect = 1.350e-133
Identity = 214/242 (88.43%), Postives = 220/242 (90.91%), Query Frame = 0
Query:    1 MGERGVALETYRHALDIEPKNKWLQEQVRRARAEVVNASKVDPIESVDAWILVFDSMSDSRERLSTLAHLWNQCEKPDRHEIFGQFLSLIAGAGTQHTGVKPEDFTEDMMVSLPMDNYEDLKASHRDHAAPVDTWMAFFRGLARQEKVQGFKRMWESTEDKEKNVIVNDLRHFFLEPLINGGSSXXXXXXXXXXXXXXGEGVAAVAAAVAELEEGAKVTSDVGLAVPAPGTGEAVGSSERQD 242
            MGERGVALETYRHALDIEPKNKWLQEQVRRARAEVV+ASKV+P+ESVDAWI+VF+SMSDSRERLSTLAHLWNQCE PDRHEIFGQFLSLIAGAGTQHTGVKPEDFTEDMMVSLPMDNYEDLKA       PVDTWMAFFRGL RQEKVQGFKRMWESTEDKEKNVIVNDLRHFFLEPLINGG  XXXXXXXXXXXXXX         AV ELE+GAKVTSDVGLAVPAPGTGEAVGSS RQD
Sbjct:   89 MGERGVALETYRHALDIEPKNKWLQEQVRRARAEVVSASKVEPVESVDAWIVVFESMSDSRERLSTLAHLWNQCETPDRHEIFGQFLSLIAGAGTQHTGVKPEDFTEDMMVSLPMDNYEDLKAR-----IPVDTWMAFFRGLTRQEKVQGFKRMWESTEDKEKNVIVNDLRHFFLEPLINGGXXXXXXXXXXXXXXXXXXXXXXXXXAVTELEQGAKVTSDVGLAVPAPGTGEAVGSSGRQD 325          
BLAST of mRNA_Ecto-sp13_S_contig1502.3797.1 vs. uniprot
Match: A0A6V1NCR2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NCR2_HETAK)

HSP 1 Score: 140 bits (352), Expect = 6.590e-37
Identity = 66/179 (36.87%), Postives = 103/179 (57.54%), Query Frame = 0
Query:    1 MGERGVALETYRHALDIEPKNKWLQEQVRRARAEVVNASKVDPIESVDAWILVFDSMSDSRERLSTLAHLWNQCEKPDRHEIFGQFLSLIAGAGTQHTGVKPEDFTEDMMVSLPMDNYEDLKASHRDHAAPVDTWMAFFRGLARQEKVQGFKRMWESTEDKEKNVIVNDLRHFFLEPLI 179
            MG      E YR A   +  N W + Q ++A+ E     + +P+ +++ W+ +F  + D RER+  LA  WN     +R  IF +FL++I+GA       K E+FTED MV LPMDNYED++ +        D W+ F+       K+  F++ W++T D+EKN+I+NDL+HFFL P++
Sbjct:   90 MGNLEGVYEAYRAAFQTDSSNDWAKTQYKQAKKEYTTFLREEPVSTIEQWVKLFGMLEDPRERMMQLALFWNASSPAERQSIFHRFLAIISGAAMTDAVAK-EEFTEDKMVELPMDNYEDMQKT--------DAWVDFYTSQDSAAKLDVFEKTWDATTDQEKNIIINDLKHFFLVPVL 259          
BLAST of mRNA_Ecto-sp13_S_contig1502.3797.1 vs. uniprot
Match: A0A7S2XUE6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUE6_9STRA)

HSP 1 Score: 123 bits (308), Expect = 4.030e-30
Identity = 67/175 (38.29%), Postives = 102/175 (58.29%), Query Frame = 0
Query:    8 LETYRHALDIEPKNKWLQEQVRRARAEVVNASKVDPIES-VDAWILVFDSMSDSRERLSTLAHLWNQCEKPDRHEIFGQFLSLIAGAGTQHTGVKP--EDFTEDMMVSLPMDNYEDLKASHRDHAAPVDTWMAFFRGLARQEKVQGFKRMWESTEDKEKNVIVNDLRHFFLEPLI 179
            ++ Y+ AL  + K++W+ +Q+R+AR  + +  + + I    + W  +F S+++ RER+ TLA  WN   K +R  IF +FL +I G       + P  E++TED M  LPMDNY D +        PV  WM F+      EK+  F+ MWE T D+EK VI+NDL+HFFL P++
Sbjct:  104 VQAYQEALKADSKSQWVAKQLRQARDALNHHWRTNSITGGTEEWKEIFISLTEPRERMFTLACFWNCSSKQERLLIFRRFLDII-GNSPDDARIAPASEEYTEDHMQELPMDNYVDFE--------PVQPWMDFYTSQESTEKMNTFQLMWELTSDQEKTVIINDLKHFFLVPML 269          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1502.3797.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JK11_9PHAE1.350e-13388.43Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6V1NCR2_HETAK6.590e-3736.87Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XUE6_9STRA4.030e-3038.29Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..21
score: 9.631

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1502contigEcto-sp13_S_contig1502:803..4379 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1502.3797.1mRNA_Ecto-sp13_S_contig1502.3797.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1502 2..5151 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1502.3797.1 ID=prot_Ecto-sp13_S_contig1502.3797.1|Name=mRNA_Ecto-sp13_S_contig1502.3797.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=249bp
MGERGVALETYRHALDIEPKNKWLQEQVRRARAEVVNASKVDPIESVDAW
ILVFDSMSDSRERLSTLAHLWNQCEKPDRHEIFGQFLSLIAGAGTQHTGV
KPEDFTEDMMVSLPMDNYEDLKASHRDHAAPVDTWMAFFRGLARQEKVQG
FKRMWESTEDKEKNVIVNDLRHFFLEPLINGGSSQAEEDDDDDDSAEEGE
GVAAVAAAVAELEEGAKVTSDVGLAVPAPGTGEAVGSSERQDSTSAGD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom