prot_Ecto-sp13_S_contig1492.3742.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1492.3742.1
Unique Nameprot_Ecto-sp13_S_contig1492.3742.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length351
Homology
BLAST of mRNA_Ecto-sp13_S_contig1492.3742.1 vs. uniprot
Match: D7FKK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKK4_ECTSI)

HSP 1 Score: 603 bits (1554), Expect = 2.930e-216
Identity = 313/350 (89.43%), Postives = 326/350 (93.14%), Query Frame = 0
Query:    1 MVESGLMQAVVIVVGLTVLVMVCILFQGRPRPNAFSPEQLGQLRIDREMAKEALLEEKAQRLKERARIHRHNRLVLTARKSAGRLLHGAQERWDARGRSIYGDAWDDPHDGNVPLRTLFNLPKEEIESIREEASRLVESERPASDFSLLPTPPGQQRRARDGSASSVSRTTDFAKDDHRTMTAPARRGPAYGSSRSPTVAPFVDSRFVHLSTSPAVVPPLDLARLNNNPSKLRSGDTWSYSAAKGGEMLRDRLPSQDGNPNSRHRMRVQARNSPASGHTTRETQELHGGHAVISAFQAPGLTRPKPPAIPFPRAKPETESTELGRESLSARLARLSAGRTPGRVVPVELV 350
            MVESGLMQAVVIVVGLTVLVMVCILFQGRPRPNAFSPEQLGQ+RI+REMAKEALLEEKAQRLKERARIHRHNRLVLTARK AGRLLHGAQERWDARGRSIYGDAWDDPHDGNVPLRTLFNLPKEEI+SIREEASRL+ESE PASDFS LPTPPGQQRR RDGSASSV RTTD  +DDHR MTAPARRGPAYG+ RSPT APFVDSRFVHLSTSPAVVPPLD ARLNN+PSK   GD WSY AAKGGEMLRDRLP+QD NPNSR RMRVQARN PASGHTTR+ QELHGG AVIS+FQAPGLT P+PPA+PF RAKPETES ELGRESLSARLARL+AGRTPGRVVPVELV
Sbjct:    1 MVESGLMQAVVIVVGLTVLVMVCILFQGRPRPNAFSPEQLGQIRINREMAKEALLEEKAQRLKERARIHRHNRLVLTARKGAGRLLHGAQERWDARGRSIYGDAWDDPHDGNVPLRTLFNLPKEEIDSIREEASRLLESE-PASDFSSLPTPPGQQRRVRDGSASSVRRTTDSDQDDHRAMTAPARRGPAYGNGRSPTAAPFVDSRFVHLSTSPAVVPPLDFARLNNDPSKFPPGDVWSYPAAKGGEMLRDRLPTQDRNPNSRQRMRVQARNGPASGHTTRDDQELHGGPAVISSFQAPGLTHPEPPAVPFLRAKPETESKELGRESLSARLARLAAGRTPGRVVPVELV 349          
BLAST of mRNA_Ecto-sp13_S_contig1492.3742.1 vs. uniprot
Match: A0A6H5JIG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIG2_9PHAE)

HSP 1 Score: 307 bits (786), Expect = 3.880e-102
Identity = 162/171 (94.74%), Postives = 164/171 (95.91%), Query Frame = 0
Query:    1 MVESGLMQAVVIVVGLTVLVMVCILFQGRPRPNAFSPEQLGQLRIDREMAKEALLEEKAQRLKERARIHRHNRLVLTARKSAGRLLHGAQERWDARGRSIYGDAWDDPHDGNVPLRTLFNLPKEEIESIREEASRLVESERPASDFSLLPTPPGQQRRARDGSASSVSRTT 171
            MVESGLMQAVVIVVGLTVLVMVCILFQGRPRPNAFSPEQLGQLRIDREMAKEALLEEKAQRLKERARIHRHNRLVLTARK AGRLLHGAQERWDARGRSIYGDAWDDPHDGNVPLRTLFNLPKEEI+SIREEASRL+ESE PASDF  LPTPPGQQRRARDGSASS   TT
Sbjct:    1 MVESGLMQAVVIVVGLTVLVMVCILFQGRPRPNAFSPEQLGQLRIDREMAKEALLEEKAQRLKERARIHRHNRLVLTARKGAGRLLHGAQERWDARGRSIYGDAWDDPHDGNVPLRTLFNLPKEEIDSIREEASRLLESEWPASDFLSLPTPPGQQRRARDGSASSTRGTT 171          
BLAST of mRNA_Ecto-sp13_S_contig1492.3742.1 vs. uniprot
Match: A0A835ZJ30_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ30_9STRA)

HSP 1 Score: 114 bits (285), Expect = 1.300e-25
Identity = 62/140 (44.29%), Postives = 99/140 (70.71%), Query Frame = 0
Query:    3 ESGLMQAVVIVVGLTVLVMVCILFQ-GRPR-PNAFSPEQLGQLRIDREMAKEALLEEKAQRLKERARIHRHNRLVLTARKSAGRLL--HGAQERWDARGRSIYGDAWDDPHDGNVPLRTLFNLPKEEIESIREEASRLVE 138
            E G+ QA +IVV + + +++C L+   RPR P  F+P +L ++R+ +E  +EA L+EK Q +++R ++H  NR++LTAR    R++   G  + WD +GR++YG AWD+P+DGN+PLR LFNLP EEI + + +A++LVE
Sbjct:    2 EQGI-QAALIVVAVILFLVICSLYTLFRPRRPRMFTPLELDEIRLRKEEEREAALDEKIQAMQQRKKMHSTNRMMLTARTKTARVVDEEGGAD-WDEKGRAVYGSAWDEPNDGNLPLRELFNLPDEEIRAAKAQAAQLVE 139          
BLAST of mRNA_Ecto-sp13_S_contig1492.3742.1 vs. uniprot
Match: A0A7S4DFT0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DFT0_HETAK)

HSP 1 Score: 55.1 bits (131), Expect = 5.300e-6
Identity = 21/42 (50.00%), Postives = 30/42 (71.43%), Query Frame = 0
Query:   85 LLHGAQERWDARGRSIYGDAWDDPHDGNVPLRTLFNLPKEEI 126
            ++     ++DA+GR +YGDAWD P DGN PLR L  LP++E+
Sbjct:   69 MVEDGISQYDAKGREVYGDAWDTPVDGNAPLRELLALPEDEL 110          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1492.3742.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FKK4_ECTSI2.930e-21689.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JIG2_9PHAE3.880e-10294.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZJ30_9STRA1.300e-2544.29Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4DFT0_HETAK5.300e-650.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 45..72
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 27..350
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..26
NoneNo IPR availableTMHMMTMhelixcoord: 4..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1492contigEcto-sp13_S_contig1492:2102..4143 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1492.3742.1mRNA_Ecto-sp13_S_contig1492.3742.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1492 2102..4143 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1492.3742.1 ID=prot_Ecto-sp13_S_contig1492.3742.1|Name=mRNA_Ecto-sp13_S_contig1492.3742.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=351bp
MVESGLMQAVVIVVGLTVLVMVCILFQGRPRPNAFSPEQLGQLRIDREMA
KEALLEEKAQRLKERARIHRHNRLVLTARKSAGRLLHGAQERWDARGRSI
YGDAWDDPHDGNVPLRTLFNLPKEEIESIREEASRLVESERPASDFSLLP
TPPGQQRRARDGSASSVSRTTDFAKDDHRTMTAPARRGPAYGSSRSPTVA
PFVDSRFVHLSTSPAVVPPLDLARLNNNPSKLRSGDTWSYSAAKGGEMLR
DRLPSQDGNPNSRHRMRVQARNSPASGHTTRETQELHGGHAVISAFQAPG
LTRPKPPAIPFPRAKPETESTELGRESLSARLARLSAGRTPGRVVPVELV
*
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