prot_Ecto-sp13_S_contig14915.3740.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14915.3740.1
Unique Nameprot_Ecto-sp13_S_contig14915.3740.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length174
Homology
BLAST of mRNA_Ecto-sp13_S_contig14915.3740.1 vs. uniprot
Match: A0A6H5KJW5_9PHAE (Peptide deformylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJW5_9PHAE)

HSP 1 Score: 318 bits (815), Expect = 5.830e-108
Identity = 159/176 (90.34%), Postives = 166/176 (94.32%), Query Frame = 0
Query:    1 KKVDPGEVAGLRILKYPHPALRAENEEIEVFDDDVKKLARNMFKIMYAAKGVGLAAPQVGVNKRLMVFNPEGDAKNWLDEAILVNPKIVASGKGRITAEEGCLSFPGMGGK--RRNWVKVEAVNAKGKKVKKKYTDWTARIFQHEYDHLDGTVYIDHLSPPEREKVSEMSFKCLCD 174
            ++VDPGEVAGLRILKYPHPALRAENEEIEVFDDD+KKLAR+MFKIMYAAKGVGLAAPQVGVNKRLMVFNPEGDAKNWLDEAILVNPKIVASGKG+ITAEEGCLSFPGM GK  RRNWVKVEAVNAKGKKVKKKYTDWTARIFQHEYDHLDGTVYIDHLSP EREKV  +  K + D
Sbjct:   93 EEVDPGEVAGLRILKYPHPALRAENEEIEVFDDDLKKLARDMFKIMYAAKGVGLAAPQVGVNKRLMVFNPEGDAKNWLDEAILVNPKIVASGKGKITAEEGCLSFPGMEGKVERRNWVKVEAVNAKGKKVKKKYTDWTARIFQHEYDHLDGTVYIDHLSPSEREKVQPVLDKLVSD 268          
BLAST of mRNA_Ecto-sp13_S_contig14915.3740.1 vs. uniprot
Match: A0A7S1U4W5_9STRA (Peptide deformylase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4W5_9STRA)

HSP 1 Score: 231 bits (588), Expect = 2.020e-74
Identity = 114/177 (64.41%), Postives = 136/177 (76.84%), Query Frame = 0
Query:    2 KVDPGEVAG--LRILKYPHPALRAENEEIEVFDDDVKKLARNMFKIMYAAKGVGLAAPQVGVNKRLMVFNPEGDAKNWLDEAILVNPKIVASGKGRITAEEGCLSFPGMGGK--RRNWVKVEAVNAKGKKVKKKYTDWTARIFQHEYDHLDGTVYIDHLSPPEREKVSEMSFKCLCD 174
            +VDPG+V G  LRI+KYPHPALRAEN E+E FD+D+KK +R MFK+MYAA+GVGLAAPQVGVNKRLMV+NPEGDA+ WL E +LVNP+IV   +      EGCLSFP M GK  R  W+KVEA N KGKK+KKK+T W ARIFQHEYDHLDG VY D L   E+++V E   + + D
Sbjct:   24 EVDPGKVDGTDLRIVKYPHPALRAENAEVEAFDEDLKKFSREMFKVMYAAQGVGLAAPQVGVNKRLMVYNPEGDARKWLAEVVLVNPRIVERSEAVDEESEGCLSFPDMDGKVERNKWIKVEAQNLKGKKLKKKFTGWEARIFQHEYDHLDGVVYPDRLDAKEKKRVQERLDELVAD 200          
BLAST of mRNA_Ecto-sp13_S_contig14915.3740.1 vs. uniprot
Match: A0A8J6CDU3_DIALT (Peptide deformylase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CDU3_DIALT)

HSP 1 Score: 219 bits (559), Expect = 1.750e-69
Identity = 106/166 (63.86%), Postives = 126/166 (75.90%), Query Frame = 0
Query:    1 KKVDPGEVAGLRILKYPHPALRAENEEIEVFDDDVKKLARNMFKIMYAAKGVGLAAPQVGVNKRLMVFNPEGDAKNWLDEAILVNPKIVASGKGRITAEEGCLSFPGMGGK--RRNWVKVEAVNAKGKKVKKKYTDWTARIFQHEYDHLDGTVYIDHLSPPEREKV 164
            ++VDPGEVAGLR+LKYPHP LRA N E+  FDD+++ L+R MF++MYA+KGVGLAAPQVGVNKRL+VFNPEGD +    E +LVNP IV   +G    +EGCLSFPG G K  R  WVKV+A+N KGK   KKY  W ARIFQHEYDHLDGT+Y+D L   ER  V
Sbjct:   63 EEVDPGEVAGLRVLKYPHPQLRAPNAEVSTFDDELRDLSRRMFRMMYASKGVGLAAPQVGVNKRLLVFNPEGDERKMSAECVLVNPTIVERAEGTELDDEGCLSFPGFGAKVTRAKWVKVKALNLKGKPFTKKYAGWEARIFQHEYDHLDGTLYVDRLDAGERSAV 228          
BLAST of mRNA_Ecto-sp13_S_contig14915.3740.1 vs. uniprot
Match: D8LQR4_ECTSI (Peptide deformylase (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQR4_ECTSI)

HSP 1 Score: 216 bits (549), Expect = 1.820e-68
Identity = 106/112 (94.64%), Postives = 111/112 (99.11%), Query Frame = 0
Query:    1 KKVDPGEVAGLRILKYPHPALRAENEEIEVFDDDVKKLARNMFKIMYAAKGVGLAAPQVGVNKRLMVFNPEGDAKNWLDEAILVNPKIVASGKGRITAEEGCLSFPGMGGKR 112
            ++VDPGEVAGLRILKYPHPALRAEN+EIEVFDDDVKKLAR+MFKIMYAAKGVGLAAPQVGVNKRLMVFNPEGDAKNWLDEAILVNPKIVASGKGRITAEEGCLSFPGM GK+
Sbjct:   83 EEVDPGEVAGLRILKYPHPALRAENDEIEVFDDDVKKLARDMFKIMYAAKGVGLAAPQVGVNKRLMVFNPEGDAKNWLDEAILVNPKIVASGKGRITAEEGCLSFPGMEGKK 194          
BLAST of mRNA_Ecto-sp13_S_contig14915.3740.1 vs. uniprot
Match: A0A7S1GJC1_CYCTE (Peptide deformylase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GJC1_CYCTE)

HSP 1 Score: 216 bits (549), Expect = 5.560e-68
Identity = 111/171 (64.91%), Postives = 129/171 (75.44%), Query Frame = 0
Query:    1 KKVDPGEVAG--LRILKYPHPALRAENEEI---EVFDDDVKKLARNMFKIMYAAKGVGLAAPQVGVNKRLMVFNPEGDAKNWLDEAILVNPKIVASGKGRITAEEGCLSFPGMGG--KRRNWVKVEAVNAKGKKVKKKYTDWTARIFQHEYDHLDGTVYIDHLSPPEREKV 164
            K+VDPG+V G  L+I+KYPHPALRAENEEI   E+ D  + KLA+ MF +MYAA+GVGLAAPQVGVNKRLMV+NP GD+K WLDE +LVNP+IV    G     EGCLSFP M G  +R  W+KVEA+  KG+KVKKK+  W ARIFQHEYDHLDG VYID LS   R  V
Sbjct:   57 KEVDPGKVEGTDLQIVKYPHPALRAENEEITEEELQDGTIAKLAKEMFLVMYAAEGVGLAAPQVGVNKRLMVYNPSGDSKKWLDEVVLVNPRIVQLSDGTDVEIEGCLSFPDMNGDVQRSKWIKVEALTPKGRKVKKKFNGWEARIFQHEYDHLDGVVYIDRLSEKGRSDV 227          
BLAST of mRNA_Ecto-sp13_S_contig14915.3740.1 vs. uniprot
Match: A0A7R9W3J9_9STRA (Peptide deformylase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W3J9_9STRA)

HSP 1 Score: 215 bits (548), Expect = 8.400e-68
Identity = 109/171 (63.74%), Postives = 127/171 (74.27%), Query Frame = 0
Query:    1 KKVDPGEVAG--LRILKYPHPALRAENEEI---EVFDDDVKKLARNMFKIMYAAKGVGLAAPQVGVNKRLMVFNPEGDAKNWLDEAILVNPKIVASGKGRITAEEGCLSFPGMGG--KRRNWVKVEAVNAKGKKVKKKYTDWTARIFQHEYDHLDGTVYIDHLSPPEREKV 164
            ++VDPG V G  LR+LKYPHP+LR EN E+   E+ D  + K+A+ MF +MYAA+GVGLAAPQVG+NKRLMV+N  GDAK WL E +LVNPKIV    G  TA EGCLSFPGM G  +R  W+KVEA + KGKK+KKKY  W ARIFQHEYDHLDG  YID LS   RE V
Sbjct:   59 EEVDPGVVDGTDLRVLKYPHPSLRKENSEVSAEEIADGSIAKIAKEMFLVMYAAEGVGLAAPQVGINKRLMVYNEHGDAKKWLSEVVLVNPKIVEFSDGTDTATEGCLSFPGMDGPVQRSKWIKVEAQSLKGKKIKKKYKGWEARIFQHEYDHLDGITYIDRLSEDARETV 229          
BLAST of mRNA_Ecto-sp13_S_contig14915.3740.1 vs. uniprot
Match: A0A7S0E2U1_9CRYP (Peptide deformylase n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E2U1_9CRYP)

HSP 1 Score: 216 bits (549), Expect = 1.860e-67
Identity = 102/164 (62.20%), Postives = 125/164 (76.22%), Query Frame = 0
Query:    1 KKVDPGEVAG--LRILKYPHPALRAENEEIEVFDDDVKKLARNMFKIMYAAKGVGLAAPQVGVNKRLMVFNPEGDAKNWLDEAILVNPKIVASGKGRITAEEGCLSFPGMGGK--RRNWVKVEAVNAKGKKVKKKYTDWTARIFQHEYDHLDGTVYIDHLSPPE 160
            ++VDPGE+ G  LR+LKYPHP LRA +EE+  FDD+++K  + MF +MYA++GVGLAAPQVG+NKR+MVFNPEGD K WL E  L+NPKIV   +G     E CLSFPGM GK  R  W+K+EA + KGK +KKKYT WTAR+FQHEYDHL+G VYID L   E
Sbjct:   88 EEVDPGEIEGTDLRVLKYPHPKLRAPDEEVTEFDDNLRKTIKEMFLVMYASRGVGLAAPQVGINKRIMVFNPEGDKKKWLQEIALINPKIVEMSEGTDVENEACLSFPGMQGKVRRHKWIKIEAQDLKGKPIKKKYTGWTARVFQHEYDHLEGIVYIDRLEDEE 251          
BLAST of mRNA_Ecto-sp13_S_contig14915.3740.1 vs. uniprot
Match: A0A7S1XTC7_9STRA (Peptide deformylase (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XTC7_9STRA)

HSP 1 Score: 216 bits (550), Expect = 3.130e-67
Identity = 106/152 (69.74%), Postives = 123/152 (80.92%), Query Frame = 0
Query:    2 KVDPGEVAG--LRILKYPHPALRAENEEIEVFDDDVKKLARNMFKIMYAAKGVGLAAPQVGVNKRLMVFNPEGDAKNWLDEAILVNPKIVASGKGRITAEEGCLSFPGMGGK--RRNWVKVEAVNAKGKKVKKKYTDWTARIFQHEYDHLDG 149
            +VDPG+V G  LRI+KYPHPALRAEN E+E FD+D+KK +R MFK+MYAA+GVGLAAPQVGVNKRLMV+NPEGDA+ WL E +LVNP+IV   +      EGCLSFP M GK  R  W+KVEA N KGKK+KKK+T W ARIFQHEYDHLDG
Sbjct:   24 EVDPGKVDGTDLRIVKYPHPALRAENAEVEAFDEDLKKFSREMFKVMYAAQGVGLAAPQVGVNKRLMVYNPEGDARKWLAEVVLVNPRIVERSEAVDEESEGCLSFPDMDGKVERNKWIKVEAQNLKGKKLKKKFTGWEARIFQHEYDHLDG 175          
BLAST of mRNA_Ecto-sp13_S_contig14915.3740.1 vs. uniprot
Match: A0A1Z5KQL3_FISSO (Peptide deformylase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQL3_FISSO)

HSP 1 Score: 213 bits (541), Expect = 4.120e-67
Identity = 110/171 (64.33%), Postives = 126/171 (73.68%), Query Frame = 0
Query:    1 KKVDPGEVAG--LRILKYPHPALRAENEEI---EVFDDDVKKLARNMFKIMYAAKGVGLAAPQVGVNKRLMVFNPEGDAKNWLDEAILVNPKIVASGKGRITAEEGCLSFPGMGG--KRRNWVKVEAVNAKGKKVKKKYTDWTARIFQHEYDHLDGTVYIDHLSPPEREKV 164
            ++VDPG V G  LRI+KYPHPALR  NE +   E+ D  + KLA+ MF +MYAA GVGLAAPQVGVNKRLMV+N  GD K WLDE I+VNP IV   + R    EGCLSFPGM G  +R  W+KVEA+N KGKK K+K+TDW ARIFQHEYDHLDGTVYID L    R KV
Sbjct:   32 EEVDPGIVEGTELRIVKYPHPALRKPNELVTVEELKDGSIAKLAKEMFMVMYAAAGVGLAAPQVGVNKRLMVYNQSGDPKKWLDEVIMVNPTIVEFSEARNVETEGCLSFPGMDGPVERSKWIKVEAMNMKGKKFKRKFTDWEARIFQHEYDHLDGTVYIDRLDEEGRSKV 202          
BLAST of mRNA_Ecto-sp13_S_contig14915.3740.1 vs. uniprot
Match: A0A7S1YIG9_9STRA (Peptide deformylase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YIG9_9STRA)

HSP 1 Score: 214 bits (545), Expect = 5.530e-67
Identity = 106/171 (61.99%), Postives = 129/171 (75.44%), Query Frame = 0
Query:    1 KKVDPGEVAG--LRILKYPHPALRAENE---EIEVFDDDVKKLARNMFKIMYAAKGVGLAAPQVGVNKRLMVFNPEGDAKNWLDEAILVNPKIVASGKGRITAEEGCLSFPGMGG--KRRNWVKVEAVNAKGKKVKKKYTDWTARIFQHEYDHLDGTVYIDHLSPPEREKV 164
            ++VDPG V G  LR+LKYPHP+LRAEN    E E+ D  + ++A+ MF +MYAA GVGLAAPQVG+NKRLM+FN  GD   WLDE +LVNP+IV  G G     EGCLSFPGM G  +R  W++VEA+N +GKK+KKK+ DW ARIFQHEYDHLDGTVYIDHL+   R +V
Sbjct:   85 EEVDPGVVEGTDLRVLKYPHPSLRAENTLVTEEELKDGSIAQIAKEMFLVMYAANGVGLAAPQVGINKRLMIFNEHGDKTKWLDEMVLVNPRIVKKGGGTDVETEGCLSFPGMNGPVQRNKWIQVEALNKRGKKIKKKFFDWEARIFQHEYDHLDGTVYIDHLAEEARAEV 255          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14915.3740.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJW5_9PHAE5.830e-10890.34Peptide deformylase n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A7S1U4W5_9STRA2.020e-7464.41Peptide deformylase n=1 Tax=Phaeomonas parva TaxID... [more]
A0A8J6CDU3_DIALT1.750e-6963.86Peptide deformylase n=1 Tax=Diacronema lutheri Tax... [more]
D8LQR4_ECTSI1.820e-6894.64Peptide deformylase (Fragment) n=1 Tax=Ectocarpus ... [more]
A0A7S1GJC1_CYCTE5.560e-6864.91Peptide deformylase n=1 Tax=Cyclophora tenuis TaxI... [more]
A0A7R9W3J9_9STRA8.400e-6863.74Peptide deformylase n=1 Tax=Pseudictyota dubia Tax... [more]
A0A7S0E2U1_9CRYP1.860e-6762.20Peptide deformylase n=1 Tax=Hanusia phi TaxID=3032... [more]
A0A7S1XTC7_9STRA3.130e-6769.74Peptide deformylase (Fragment) n=1 Tax=Phaeomonas ... [more]
A0A1Z5KQL3_FISSO4.120e-6764.33Peptide deformylase n=2 Tax=Fistulifera solaris Ta... [more]
A0A7S1YIG9_9STRA5.530e-6761.99Peptide deformylase n=1 Tax=Grammatophora oceanica... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 21..41
NoneNo IPR availablePANTHERPTHR10458:SF2PEPTIDE DEFORMYLASEcoord: 11..163
IPR023635Peptide deformylasePRINTSPR01576PDEFORMYLASEcoord: 100..111
score: 53.86
coord: 40..69
score: 46.05
coord: 129..158
score: 41.17
IPR023635Peptide deformylaseTIGRFAMTIGR00079TIGR00079coord: 12..166
e-value: 7.1E-45
score: 150.4
IPR023635Peptide deformylasePIRSFPIRSF004749Pep_defcoord: 1..171
e-value: 1.1E-53
score: 179.7
IPR023635Peptide deformylasePFAMPF01327Pep_deformylasecoord: 12..161
e-value: 2.0E-47
score: 160.8
IPR023635Peptide deformylasePANTHERPTHR10458PEPTIDE DEFORMYLASEcoord: 11..163
IPR023635Peptide deformylaseHAMAPMF_00163Pep_deformylasecoord: 9..167
score: 26.055
IPR036821Peptide deformylase superfamilyGENE3D3.90.45.10coord: 4..172
e-value: 1.4E-57
score: 195.6
IPR036821Peptide deformylase superfamilySUPERFAMILY56420Peptide deformylasecoord: 11..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14915contigEcto-sp13_S_contig14915:31..3981 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14915.3740.1mRNA_Ecto-sp13_S_contig14915.3740.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14915 31..3981 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14915.3740.1 ID=prot_Ecto-sp13_S_contig14915.3740.1|Name=mRNA_Ecto-sp13_S_contig14915.3740.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=174bp
KKVDPGEVAGLRILKYPHPALRAENEEIEVFDDDVKKLARNMFKIMYAAK
GVGLAAPQVGVNKRLMVFNPEGDAKNWLDEAILVNPKIVASGKGRITAEE
GCLSFPGMGGKRRNWVKVEAVNAKGKKVKKKYTDWTARIFQHEYDHLDGT
VYIDHLSPPEREKVSEMSFKCLCD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023635Peptide_deformylase
IPR036821Peptide_deformylase_sf