prot_Ecto-sp13_S_contig14839.3689.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14839.3689.1
Unique Nameprot_Ecto-sp13_S_contig14839.3689.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length287
Homology
BLAST of mRNA_Ecto-sp13_S_contig14839.3689.1 vs. uniprot
Match: D7FXM6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXM6_ECTSI)

HSP 1 Score: 486 bits (1251), Expect = 2.800e-161
Identity = 255/287 (88.85%), Postives = 270/287 (94.08%), Query Frame = 0
Query:    1 MSENQQQGSGTAAVGCEHDDWKDFSCVTKWEHFINDVAGAAAAATTQRRSNKKLTSYDGRSYCLRRLIAGSDNSXXXXXXXXXSKVRTTAGSAATAGDESNISEFPEIASFFGEEECSLDAWLAPEPSSSSATVSSREKEADKREFLEDMEAWHLLRSWFGFGDLLCLHEAATNPASSSRSGDGTGAVLSLEQLLSTGVMAMEDRRCGAVLAVQQQPGGDGDGRRGRGSRDSASRRGVSIKGYAILSPTGHADWTRRAETVRLESEASSVVPRSRLSLEALGELLTD 287
            MSENQQQGS TAAV CEHDDWKDFSCVTKWE+FINDVAGAAAA TTQRRSNK+LTSYDGRSYCLR LIAG ++  XXXXXXXXSK R TAG AATAGDE +IS FP++ASFFGEEECSLDAWLAPEPSSS+AT+SSRE+EAD+REFLED+EAWHLLRSWFGFGDLLCLHEAAT PASSSRSGDG G  LSLEQLLSTGVMAMEDRRCGAVLA+QQQPGGDG+GRRGRGSRDSASRRGVS+KGYA LSPTGHADWTRRAETVRLESEASSVVPRSRLSLEALGELLTD
Sbjct:    1 MSENQQQGSRTAAVSCEHDDWKDFSCVTKWEYFINDVAGAAAAITTQRRSNKQLTSYDGRSYCLRSLIAGPNSDNXXXXXXXXSKARMTAGGAATAGDEGDISAFPDLASFFGEEECSLDAWLAPEPSSSAATMSSREEEADEREFLEDVEAWHLLRSWFGFGDLLCLHEAATKPASSSRSGDGAGTGLSLEQLLSTGVMAMEDRRCGAVLAMQQQPGGDGNGRRGRGSRDSASRRGVSVKGYATLSPTGHADWTRRAETVRLESEASSVVPRSRLSLEALGELLTD 287          
BLAST of mRNA_Ecto-sp13_S_contig14839.3689.1 vs. uniprot
Match: A0A6H5L3A9_9PHAE (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3A9_9PHAE)

HSP 1 Score: 479 bits (1233), Expect = 8.560e-154
Identity = 254/287 (88.50%), Postives = 268/287 (93.38%), Query Frame = 0
Query:    1 MSENQQQGSGTAAVGCEHDDWKDFSCVTKWEHFINDVAGAAAAATTQRRSNKKLTSYDGRSYCLRRLIAGSDNSXXXXXXXXXSKVRTTAGSAATAGDESNISEFPEIASFFGEEECSLDAWLAPEPSSSSATVSSREKEADKREFLEDMEAWHLLRSWFGFGDLLCLHEAATNPASSSRSGDGTGAVLSLEQLLSTGVMAMEDRRCGAVLAVQQQPGGDGDGRRGRGSRDSASRRGVSIKGYAILSPTGHADWTRRAETVRLESEASSVVPRSRLSLEALGELLTD 287
            MSENQQQGS TAAVGCEHDDWKDFSCVTKWE+FINDVAGAAAA TTQRRS KKLTSYDGRSYCLRRLIAG ++  XXXXXXXX + R +AG AATAGDE +ISEFP++ASFFGEEECSLDAWLAPEPSSSSAT+SSRE+EAD+REFLEDM AWHLLRSWFGFGDLLCLHEAATNPASSSRSGDG G VLSLEQLLSTGVMAMEDRRCGAVLA+QQQPGGDGDGRRGR SRDSASRRGVS+KGYA LSP GHADWTRRAETV LESEASS +PRSRLSLEALGELLTD
Sbjct:    1 MSENQQQGSRTAAVGCEHDDWKDFSCVTKWEYFINDVAGAAAA-TTQRRSTKKLTSYDGRSYCLRRLIAGPNSDNXXXXXXXXXEARISAGGAATAGDEGDISEFPDLASFFGEEECSLDAWLAPEPSSSSATMSSREEEADEREFLEDMGAWHLLRSWFGFGDLLCLHEAATNPASSSRSGDGAGTVLSLEQLLSTGVMAMEDRRCGAVLAMQQQPGGDGDGRRGRCSRDSASRRGVSVKGYATLSPIGHADWTRRAETVCLESEASSAIPRSRLSLEALGELLTD 286          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14839.3689.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXM6_ECTSI2.800e-16188.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L3A9_9PHAE8.560e-15488.50Rab3 GTPase-activating protein catalytic subunit n... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14839contigEcto-sp13_S_contig14839:1012..4116 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14839.3689.1mRNA_Ecto-sp13_S_contig14839.3689.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14839 1012..4116 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14839.3689.1 ID=prot_Ecto-sp13_S_contig14839.3689.1|Name=mRNA_Ecto-sp13_S_contig14839.3689.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=287bp
MSENQQQGSGTAAVGCEHDDWKDFSCVTKWEHFINDVAGAAAAATTQRRS
NKKLTSYDGRSYCLRRLIAGSDNSNNSNSNDNNSKVRTTAGSAATAGDES
NISEFPEIASFFGEEECSLDAWLAPEPSSSSATVSSREKEADKREFLEDM
EAWHLLRSWFGFGDLLCLHEAATNPASSSRSGDGTGAVLSLEQLLSTGVM
AMEDRRCGAVLAVQQQPGGDGDGRRGRGSRDSASRRGVSIKGYAILSPTG
HADWTRRAETVRLESEASSVVPRSRLSLEALGELLTD
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