prot_Ecto-sp13_S_contig14817.3674.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14817.3674.1
Unique Nameprot_Ecto-sp13_S_contig14817.3674.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length354
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14817.3674.1 vs. uniprot
Match: D7FXJ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXJ1_ECTSI)

HSP 1 Score: 196 bits (499), Expect = 5.380e-56
Identity = 194/328 (59.15%), Postives = 198/328 (60.37%), Query Frame = 0 
Query:   14 RIPTVSEASMMGRVGAGGDNMRRGRRGIQITISTNKATQDNGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLVPRSCEHCRMPYIPKSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLEGSLAGGSSLGSLASSLAAKACDNDNNSKSESGSCDKGKKEGPFSPLSQLIEDRTARPSPASSSSSAATSRQGSTNGGAYSXXXGYRGSSGGSRDG-GENTDANGEEGRFCSGECKMSYMLMNPAAVRRRRAAHAARMAMRAAQIEASIERSRRAA 340
            RIPTVSEASMMG+VGA G NMRRGRRGIQITISTNK +                                                           RLVPRSCEHCRMPYIPKSAA     XXXXXXXXXXXXXXXXX      XXXXXXXXXXXXXXXXXXXXXX     EG               AAK  DNDNNSKSESGSCDKGKKEGPFSPLSQLI DRTARPSPASS                  XXX             G+NTDAN EEGRFCSGECKMSYMLMNPAA+RRRRAAHAARMAMRAAQIE SIERSRR A
Sbjct:   70 RIPTVSEASMMGQVGARGGNMRRGRRGIQITISTNKGS---------------------------FFLHDSSHVIAAAANGSGSKGEDDDAKAHRRRRLVPRSCEHCRMPYIPKSAAAAPVSXXXXXXXXXXXXXXXXXEEASVEXXXXXXXXXXXXXXXXXXXXXX-----EGXXXXXXXXXXXXXXXAAKTSDNDNNSKSESGSCDKGKKEGPFSPLSQLIGDRTARPSPASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNRGDNTDANSEEGRFCSGECKMSYMLMNPAAIRRRRAAHAARMAMRAAQIEVSIERSRRVA 365
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14817.3674.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FXJ1_ECTSI5.380e-5659.15Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14817contigEcto-sp13_S_contig14817:811..2010 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14817.3674.1mRNA_Ecto-sp13_S_contig14817.3674.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14817 811..2010 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14817.3674.1 ID=prot_Ecto-sp13_S_contig14817.3674.1|Name=mRNA_Ecto-sp13_S_contig14817.3674.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=354bp
RPRPSPSPVQKIQRIPTVSEASMMGRVGAGGDNMRRGRRGIQITISTNKA
TQDNGAPPPPPRRRRSSGGSSNNNSPGSFFLHDSSHVIAAAASGSGSKGE
DDDAKAHRRRRLVPRSCEHCRMPYIPKSAAAAPVSSSTSTDSSSSGVAAG
GGGGGGGEEAGVEASSRGSSRSSCGGGSAGGGVVLEGSLAGGSSLGSLAS
SLAAKACDNDNNSKSESGSCDKGKKEGPFSPLSQLIEDRTARPSPASSSS
SAATSRQGSTNGGAYSSSSGYRGSSGGSRDGGENTDANGEEGRFCSGECK
MSYMLMNPAAVRRRRAAHAARMAMRAAQIEASIERSRRAARRVESTPGGG
GGC*
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