prot_Ecto-sp13_S_contig1481.3672.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1481.3672.1
Unique Nameprot_Ecto-sp13_S_contig1481.3672.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length171
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1481.3672.1 vs. uniprot
Match: D8LKT5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKT5_ECTSI)

HSP 1 Score: 187 bits (474), Expect = 6.420e-58
Identity = 92/95 (96.84%), Postives = 92/95 (96.84%), Query Frame = 0 
Query:    1 MARRSVTIVASDGRREGISWYDGATEAAVLRCALLALGLPLKSAAHLLWQSGDIVDLGTPITDGATLHLDTVRELTLPSQEAAGDVYASGAHDHG 95
            MARRSVTIVASDGRREGISWYDGATEAAVLRCALLALGLPLKSAAHLLWQSGDIVDLGTPITDGATLHLDTVREL LPSQEAAGDVY SG HDHG
Sbjct:    1 MARRSVTIVASDGRREGISWYDGATEAAVLRCALLALGLPLKSAAHLLWQSGDIVDLGTPITDGATLHLDTVRELALPSQEAAGDVYTSGGHDHG 95
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BLAST of mRNA_Ecto-sp13_S_contig1481.3672.1 vs. uniprot
Match: A0A6H5LJ65_9PHAE (DUF202 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJ65_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 6.120e-54
Identity = 92/95 (96.84%), Postives = 92/95 (96.84%), Query Frame = 0 
Query:    1 MARRSVTIVASDGRREGISWYDGATEAAVLRCALLALGLPLKSAAHLLWQSGDIVDLGTPITDGATLHLDTVRELTLPSQEAAGDVYASGAHDHG 95
            MARRSVTIVASDGRREGISWYDGATEAAVLRCALLALGLPLKSAAHLL QSGDIVDLGTPITDGATLHLDTVREL LPSQEAAGDVYASG HDHG
Sbjct:    1 MARRSVTIVASDGRREGISWYDGATEAAVLRCALLALGLPLKSAAHLLRQSGDIVDLGTPITDGATLHLDTVRELALPSQEAAGDVYASGGHDHG 95
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1481.3672.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKT5_ECTSI6.420e-5896.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LJ65_9PHAE6.120e-5496.84DUF202 domain-containing protein n=1 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1481contigEcto-sp13_S_contig1481:14871..16294 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1481.3672.1mRNA_Ecto-sp13_S_contig1481.3672.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1481 14667..16294 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1481.3672.1 ID=prot_Ecto-sp13_S_contig1481.3672.1|Name=mRNA_Ecto-sp13_S_contig1481.3672.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=171bp
MARRSVTIVASDGRREGISWYDGATEAAVLRCALLALGLPLKSAAHLLWQ
SGDIVDLGTPITDGATLHLDTVRELTLPSQEAAGDVYASGAHDHGGSSST
TTQRRVNCSNTAVGGGGGEGGLATTRRGGSVSVTASGGGGDCRQRPSTTE
SSLAKRRALRTIRLFFGVEGG
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