prot_Ecto-sp13_S_contig14807.3667.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14807.3667.1
Unique Nameprot_Ecto-sp13_S_contig14807.3667.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length526
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14807.3667.1 vs. uniprot
Match: D7FTQ1_ECTSI (Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTQ1_ECTSI)

HSP 1 Score: 729 bits (1882), Expect = 2.650e-247
Identity = 461/561 (82.17%), Postives = 467/561 (83.24%), Query Frame = 0 
Query:    1 QLAASVPTEGAPSGAFFHEHELASDELHYYLIYVSDASKNVSVTVAWFDPPSPVSSYN-----------------------LLHDLDMFLMSVDARRYYRSNHYDTIATMCGADESCAEKYEFTYENGLADYMNPVERVTVPSSDLEEGYHVVGVRARTLTESDVQAYGLAAAGGGLVLHGMSKNWTDLVLETDSTHGSGLGTDEPDPDGEVNGATPAPSVLVAEGSADDGGAP------TGDSVVITPTSAPVETATGSTSGSGTSMAGDEDGLSGDSTGSGAGVSHLGGGDDDISAAGGIEADVPEDGDLDVDGGGSXXXXXXXXXXXXXXXXXXXXAALLIGAGICLAVRRNKLRSSGRRDETGSFLCPVRNASSSAGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------RVVGFYDGGDMPPLEPQRGLPGYATAVASMPEEEGHTIIRDRAGVERMVELTAADESEVSGFYYAVDPGAVETLVSWGISRDFARVALRQTDNDVQEALQMIAEGNMDELLAMDHEEMAREGREAAAAAEAAAAGRHGTMV 525
            QLAASVPTEGAP GAF+HEHELASDELHYYLIYVSDASK VSVTVAWFDPPSPVSSYN                       LLHDLDMF+MSVDARRYYRSNH+DTIATMC ADESCAEKYEFTYEN LADYMNPVERVTVPSSDLEEGYHVVGVRARTLTESDVQAYG+AAAGGGLVLHGMSKNWTDLVLETDST G+G+                                       TGDSV I PTS PVETATGSTSGSGTSMAGDED  SGDSTGSGAGVSHLGGGDDDISAAGGIE DVPE GDLDVDGG      XXXXXXXXXXXXXXXX   LIGAGICLAVRRNKLRSSGRRDETGSFLCPVRNASSSA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXX         RVVGFYDGGDMPPLEPQRGLPGYATAVASMPEEEGHTIIRDRAGVERMVELTAADESEVSGFYYAVDPGAVETLVSWGISRDFARVALRQTDNDVQEALQMIAEGNMDELLAMDHEEMAREGREAAAAAEAAAAGRHGTMV
Sbjct:  931 QLAASVPTEGAPMGAFYHEHELASDELHYYLIYVSDASKTVSVTVAWFDPPSPVSSYNRSSSWAQESMMTFMTFLRLRRPKLLHDLDMFVMSVDARRYYRSNHHDTIATMCDADESCAEKYEFTYENDLADYMNPVERVTVPSSDLEEGYHVVGVRARTLTESDVQAYGVAAAGGGLVLHGMSKNWTDLVLETDSTQGTGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGDSVAIAPTSDPVETATGSTSGSGTSMAGDEDEFSGDSTGSGAGVSHLGGGDDDISAAGGIETDVPEGGDLDVDGG------XXXXXXXXXXXXXXXXXXXLIGAGICLAVRRNKLRSSGRRDETGSFLCPVRNASSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRNHGEEDDRVVGFYDGGDMPPLEPQRGLPGYATAVASMPEEEGHTIIRDRAGVERMVELTAADESEVSGFYYAVDPGAVETLVSWGISRDFARVALRQTDNDVQEALQMIAEGNMDELLAMDHEEMAREGREAAAAAEAAAAGRHGTMV 1485
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14807.3667.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FTQ1_ECTSI2.650e-24782.17Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7F... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.380coord: 17..150
e-value: 1.7E-8
score: 36.5
NoneNo IPR availableGENE3D1.10.8.10coord: 374..492
e-value: 1.8E-6
score: 30.0
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 304..323
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..303
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 324..525
NoneNo IPR availableTMHMMTMhelixcoord: 301..323
IPR015940Ubiquitin-associated domainPROSITEPS50030UBAcoord: 449..489
score: 9.896
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 444..492

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14807contigEcto-sp13_S_contig14807:2354..4327 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14807.3667.1mRNA_Ecto-sp13_S_contig14807.3667.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14807 2354..4327 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14807.3667.1 ID=prot_Ecto-sp13_S_contig14807.3667.1|Name=mRNA_Ecto-sp13_S_contig14807.3667.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=526bp
QLAASVPTEGAPSGAFFHEHELASDELHYYLIYVSDASKNVSVTVAWFDP
PSPVSSYNLLHDLDMFLMSVDARRYYRSNHYDTIATMCGADESCAEKYEF
TYENGLADYMNPVERVTVPSSDLEEGYHVVGVRARTLTESDVQAYGLAAA
GGGLVLHGMSKNWTDLVLETDSTHGSGLGTDEPDPDGEVNGATPAPSVLV
AEGSADDGGAPTGDSVVITPTSAPVETATGSTSGSGTSMAGDEDGLSGDS
TGSGAGVSHLGGGDDDISAAGGIEADVPEDGDLDVDGGGSGGSGGSGGTT
ITTIAASSAAAALLIGAGICLAVRRNKLRSSGRRDETGSFLCPVRNASSS
AGRAAVGGGGGGGGGSGGGDDDEETDRHHGEEDDRVVGFYDGGDMPPLEP
QRGLPGYATAVASMPEEEGHTIIRDRAGVERMVELTAADESEVSGFYYAV
DPGAVETLVSWGISRDFARVALRQTDNDVQEALQMIAEGNMDELLAMDHE
EMAREGREAAAAAEAAAAGRHGTMV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015940UBA
IPR009060UBA-like_sf