prot_Ecto-sp13_S_contig14790.3652.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14790.3652.1
Unique Nameprot_Ecto-sp13_S_contig14790.3652.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length510
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14790.3652.1 vs. uniprot
Match: D7FRI7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRI7_ECTSI)

HSP 1 Score: 273 bits (699), Expect = 6.920e-85
Identity = 229/345 (66.38%), Postives = 237/345 (68.70%), Query Frame = 0 
Query:  165 ISEVEIYVEVTQTEVFIPAAEAWNDVAADTITTVTPSASWSVAGFGPNMTTDGDDNTVAASYWSCQAPTGTLSSSFGYESSSDYDSCWLYFELNDEYTASYMMLYVHESNDATKEPIQFDVYGCTIDAFSCYNEYANELVGSSTTVPGTPLGEGERVNLIRPSAVSLGIHFNLSAGAIVSISEVELFVQTPDATPTPAPFVPTPETEAPVYSWMNGDDSDDDYVWAXXXXXXXXXXXXXXXXXXXDDTSSSTANDRSGVVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADDAADIEDFGNGALARGGLCSRQGLAGAVAVGAMFISFAANTM 509
            +S+VEIYVEVTQTEVFIPAAEAWNDVAADTITTVTPSASWSVAGFGPNMTT                                                                                   YA+ELVGSSTTVPGTPLGEGERVNLIRP  VSLGIHFNLSAGAIVSISEVELFVQTPDATPTPAPFVPTPETEAPVYSWMNGDDSD      XXXXXXXXXXXXXXXXXXX      TA D +G V+  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   ADDAADI++FGNGALARGG+CSRQGL G VAVGAMFISFAAN M
Sbjct:   45 LSQVEIYVEVTQTEVFIPAAEAWNDVAADTITTVTPSASWSVAGFGPNMTT-----------------------------------------------------------------------------------YADELVGSSTTVPGTPLGEGERVNLIRPLTVSLGIHFNLSAGAIVSISEVELFVQTPDATPTPAPFVPTPETEAPVYSWMNGDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATDEAGGVTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDDADDAADIDNFGNGALARGGVCSRQGLVGVVAVGAMFISFAANAM 306
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14790.3652.1 vs. uniprot
Match: D7FRI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRI8_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 4.390e-5
Identity = 34/76 (44.74%), Postives = 52/76 (68.42%), Query Frame = 0 
Query:  100 HESDDATKEAMTMNVYSSYSGYDPAGSFVTVPGTALGAGHRVNLNRPLATS-LTVVPVLSAGQWVDISEVEIYVEV 174
            HESDDAT+ +++ +V     GYD   + +T PGTALGAG RVN+    + + L ++  L++ Q +D+SEVEIY++V
Sbjct:   62 HESDDATQLSISFDVEV---GYDTVHTDLTSPGTALGAGQRVNMPPDASGNYLHLLFDLTSDQAIDVSEVEIYLDV 134
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14790.3652.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FRI7_ECTSI6.920e-8566.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRI8_ECTSI4.390e-544.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14790contigEcto-sp13_S_contig14790:150..4282 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14790.3652.1mRNA_Ecto-sp13_S_contig14790.3652.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14790 150..4282 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14790.3652.1 ID=prot_Ecto-sp13_S_contig14790.3652.1|Name=mRNA_Ecto-sp13_S_contig14790.3652.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=510bp
VKVDTVSNVVAAATFWDLRTDAGCGEAGCDPLLAHDGHNNTVASSRWSCE
SSLDVDVENYVFFSSPQYCQLQFVFGDEGDSVWDDDNLIFTVSHVVIYVH
ESDDATKEAMTMNVYSSYSGYDPAGSFVTVPGTALGAGHRVNLNRPLATS
LTVVPVLSAGQWVDISEVEIYVEVTQTEVFIPAAEAWNDVAADTITTVTP
SASWSVAGFGPNMTTDGDDNTVAASYWSCQAPTGTLSSSFGYESSSDYDS
CWLYFELNDEYTASYMMLYVHESNDATKEPIQFDVYGCTIDAFSCYNEYA
NELVGSSTTVPGTPLGEGERVNLIRPSAVSLGIHFNLSAGAIVSISEVEL
FVQTPDATPTPAPFVPTPETEAPVYSWMNGDDSDDDYVWANDDDDAAGVV
GSSNDDNLVDDTSSSTANDRSGVVSSGDDNLVDDSLSSTADDEAGGVTSG
DDGPAIGLPSSTADDADDAADIEDFGNGALARGGLCSRQGLAGAVAVGAM
FISFAANTM*
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