prot_Ecto-sp13_S_contig14781.3648.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14781.3648.1
Unique Nameprot_Ecto-sp13_S_contig14781.3648.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length598
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14781.3648.1 vs. uniprot
Match: A0A6H5L9V8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9V8_9PHAE)

HSP 1 Score: 197 bits (500), Expect = 5.090e-55
Identity = 189/224 (84.38%), Postives = 190/224 (84.82%), Query Frame = 0 
Query:  376 MVVPTFPPGPLQAQXXXXXXXXXXXXXXXXXGGVNN-AMTPHHMAGVVPPHVMAGARGPMPPQQFPQPMYRAAMGQPPQMFLQPPRMPMAPGQIQGFPPQGIQVVGQPGGAAPPPGSPFYHGQMQMAQXXXXXXPXXXPGXXXXXXXXXXXXXXXGQQQQXXXXXXXXXXXXXXXXXXXRGFPMMPGXXXXXXXXXXXXXXXXXXXXXXXXXXXNAGGMGGMRP 598
            MVVPTFPPGPLQAQXXXXXXXXXXXXXXXXX      AM PHHMAGVVPPHVMAGARGPMPPQQFPQPMYRAAMGQPPQMF+QPPRMPMAPGQIQGFPPQGIQVVGQPGGAAPPPGSPFYHGQMQMA XXXXXX XXX  XXXXXXXXXXXXXXXG    XXXXXXXXXXXXX      RGFPMMPG         XXXXXXXXXXXXXX    NAGGMGGMRP
Sbjct:    1 MVVPTFPPGPLQAQXXXXXXXXXXXXXXXXXXXXXXXAMNPHHMAGVVPPHVMAGARGPMPPQQFPQPMYRAAMGQPPQMFMQPPRMPMAPGQIQGFPPQGIQVVGQPGGAAPPPGSPFYHGQMQMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXXXX------RGFPMMPGHPGAGGAPPXXXXXXXXXXXXXXRPG-NAGGMGGMRP 217
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BLAST of mRNA_Ecto-sp13_S_contig14781.3648.1 vs. uniprot
Match: D7FVW5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVW5_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 9.020e-38
Identity = 71/73 (97.26%), Postives = 72/73 (98.63%), Query Frame = 0 
Query:  427 MAGARGPMPPQQFPQPMYRAAMGQPPQMFLQPPRMPMAPGQIQGFPPQGIQVVGQPGGAAPPPGSPFYHGQMQ 499
            MAGARGPMPPQQFPQPMYRAAMGQPPQMF+QPPRMPMAPGQIQGFPPQGIQVVGQPGGA PPPGSPFYHGQMQ
Sbjct:    1 MAGARGPMPPQQFPQPMYRAAMGQPPQMFMQPPRMPMAPGQIQGFPPQGIQVVGQPGGAVPPPGSPFYHGQMQ 73
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14781.3648.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L9V8_9PHAE5.090e-5584.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVW5_ECTSI9.020e-3897.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14781contigEcto-sp13_S_contig14781:3..3068 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14781.3648.1mRNA_Ecto-sp13_S_contig14781.3648.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14781 3..3068 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14781.3648.1 ID=prot_Ecto-sp13_S_contig14781.3648.1|Name=mRNA_Ecto-sp13_S_contig14781.3648.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=598bp
MAAAKPPLPSPSSSARGGTGAGSAAAEAAAEKKKSALRASAKEWKPNPTA
KEWKPPGGAPTAVAPAAAASASPVVVAAAAVSTPQVMTPTAVSIASPSPR
GAGGGGFGTGGRGVMSGGSMGYGGGGHNADEHGHMHQQQHHHNHHHQPHQ
QQQLHHHQFNHPQHVPHQQQQQQPQQQQQQQQHHHPQQFQHGSGGSGGGG
GGGSHAHPHQQPHAHPQHHQPPQQQQQQPPPHQQHHHPPQQHPHPPHQPN
QHHHGSQQGSPQNSSQQHPPQQQSPHRQQPPPQQQQPQQQQQQQPPHPSH
HAQQQQQQPQAQQQTHQPRSQQQQQQQQQQQQQQQPQQHPSTPQQHPSTP
QQQAMPPPVPQGVTGPPAVGPGGAQMVVPTFPPGPLQAQQQQMAAAAAAA
VATAGAGGVNNAMTPHHMAGVVPPHVMAGARGPMPPQQFPQPMYRAAMGQ
PPQMFLQPPRMPMAPGQIQGFPPQGIQVVGQPGGAAPPPGSPFYHGQMQM
AQQQQQQQPQQQPGQPQLQLPPPQIPVPPGQQQQQQPQQQQQQQQPQQQQ
QQQRGFPMMPGHPGAGGAPPPPHPGPPQTPPQPQRPGTNAGGMGGMRP
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